RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 PLBD2Q8NHP8 589 aa11.62□□□□□ -0.55
TCF4-240ENST00000568673 ZCRB1Q8TBF4 217 aaKnown RBP11.62□□□□□ -0.55
TCF4-240ENST00000568673 FOXD4L4Q8WXT5 416 aaPredicted RBP11.62□□□□□ -0.55
TCF4-240ENST00000568673 TM6SF1Q9BZW5 370 aa11.62□□□□□ -0.55
TCF4-240ENST00000568673 SNRKQ9NRH2 765 aa11.62□□□□□ -0.55
TCF4-240ENST00000568673 TLR7Q9NYK1 1049 aaKnown RBP11.62□□□□□ -0.55
TCF4-240ENST00000568673 ERBB4Q15303 1308 aa11.62□□□□□ -0.55
TCF4-240ENST00000568673 PCDH11XQ9BZA7 1347 aa11.62□□□□□ -0.55
TCF4-240ENST00000568673 PCDH11YQ9BZA8 1340 aa11.62□□□□□ -0.55
TCF4-240ENST00000568673 CASTP20810 708 aaKnown RBP11.62□□□□□ -0.55
TCF4-240ENST00000568673 RFX5P48382 616 aaPredicted RBP11.62□□□□□ -0.55
TCF4-240ENST00000568673 PTPN12Q05209 780 aaKnown RBP11.62□□□□□ -0.55
TCF4-240ENST00000568673 BOLA2Q9H3K6 86 aa11.62□□□□□ -0.55
TCF4-240ENST00000568673 PRDM11Q9NQV5 511 aa11.62□□□□□ -0.55
TCF4-240ENST00000568673 CCDC171Q6TFL3 1326 aa11.61□□□□□ -0.55
TCF4-240ENST00000568673 WDR33Q9C0J8 1336 aaKnown RBP11.61□□□□□ -0.55
TCF4-240ENST00000568673 A0A087WZG4 1122 aa11.61□□□□□ -0.55
TCF4-240ENST00000568673 ERVV-2B6SEH9 535 aa11.61□□□□□ -0.55
TCF4-240ENST00000568673 VPS53Q5VIR6 699 aa11.61□□□□□ -0.55
TCF4-240ENST00000568673 PRPF40BQ6NWY9 871 aaKnown RBP11.61□□□□□ -0.55
TCF4-240ENST00000568673 TOM1L2Q6ZVM7 507 aa11.61□□□□□ -0.55
TCF4-240ENST00000568673 RUFY3Q7L099 469 aa11.61□□□□□ -0.55
TCF4-240ENST00000568673 UBE3BQ7Z3V4 1068 aa11.61□□□□□ -0.55
TCF4-240ENST00000568673 MAP4K1Q92918 833 aa11.61□□□□□ -0.55
TCF4-240ENST00000568673 CHAMP1Q96JM3 812 aa11.61□□□□□ -0.55
TCF4-240ENST00000568673 ZSWIM6Q9HCJ5 1215 aa11.61□□□□□ -0.55
TCF4-240ENST00000568673 ZKSCAN1P17029 563 aaPredicted RBP11.61□□□□□ -0.55
TCF4-240ENST00000568673 NMIQ13287 307 aaPredicted RBP11.61□□□□□ -0.55
TCF4-240ENST00000568673 FAM227BQ96M60 508 aa11.61□□□□□ -0.55
TCF4-240ENST00000568673 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.61□□□□□ -0.55
TCF4-240ENST00000568673 PARP4Q9UKK3 1724 aaKnown RBP11.61□□□□□ -0.55
TCF4-240ENST00000568673 SOS2Q07890 1332 aaPredicted RBP11.6□□□□□ -0.55
TCF4-240ENST00000568673 ATP5J2-PTCD1G3V325 749 aa11.6□□□□□ -0.55
TCF4-240ENST00000568673 PTCD1O75127 700 aaKnown RBP11.6□□□□□ -0.55
TCF4-240ENST00000568673 MBD3O95983 291 aa11.6□□□□□ -0.55
TCF4-240ENST00000568673 CASP7P55210 303 aa11.6□□□□□ -0.55
TCF4-240ENST00000568673 NKX1-1Q15270 411 aaPredicted RBP11.6□□□□□ -0.55
TCF4-240ENST00000568673 JARID2Q92833 1246 aaPredicted RBP11.6□□□□□ -0.55
TCF4-240ENST00000568673 CYP46A1Q9Y6A2 500 aa11.6□□□□□ -0.55
TCF4-240ENST00000568673 XIRP1Q702N8 1843 aaKnown RBP11.6□□□□□ -0.55
TCF4-240ENST00000568673 NBPF26B4DH59 902 aa11.6□□□□□ -0.55
TCF4-240ENST00000568673 ADCK5Q3MIX3 580 aa11.6□□□□□ -0.55
TCF4-240ENST00000568673 NBPF14Q5TI25 921 aa11.6□□□□□ -0.55
TCF4-240ENST00000568673 NBPF10Q6P3W6 841 aaKnown RBP11.6□□□□□ -0.55
TCF4-240ENST00000568673 NBPF15Q8N660 670 aa11.6□□□□□ -0.55
TCF4-240ENST00000568673 JAKMIP1Q96N16 626 aaKnown RBP11.6□□□□□ -0.55
TCF4-240ENST00000568673 FSD1Q9BTV5 496 aa11.6□□□□□ -0.55
TCF4-240ENST00000568673 RRAGDQ9NQL2 400 aaPredicted RBP11.6□□□□□ -0.55
TCF4-240ENST00000568673 GLI3P10071 1580 aa11.59□□□□□ -0.55
TCF4-240ENST00000568673 ATP5JP18859 108 aa11.59□□□□□ -0.55
TCF4-240ENST00000568673 NASPP49321 788 aaPredicted RBP11.59□□□□□ -0.55
TCF4-240ENST00000568673 TNNI3KQ59H18 835 aa11.59□□□□□ -0.55
TCF4-240ENST00000568673 CREB3L3Q68CJ9 461 aa11.59□□□□□ -0.55
TCF4-240ENST00000568673 PDRG1Q9NUG6 133 aa11.59□□□□□ -0.55
TCF4-240ENST00000568673 SLAIN2Q9P270 581 aa11.59□□□□□ -0.55
TCF4-240ENST00000568673 RBM8AQ9Y5S9 174 aaKnown RBP11.59□□□□□ -0.55
TCF4-240ENST00000568673 FPGT-TNNI3KV9GXZ4 949 aa11.59□□□□□ -0.55
TCF4-240ENST00000568673 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
TCF4-240ENST00000568673 H7C1W4 665 aa11.59□□□□□ -0.55
TCF4-240ENST00000568673 CPA1P15085 419 aa11.59□□□□□ -0.55
TCF4-240ENST00000568673 TFCP2Q12800 502 aa11.59□□□□□ -0.55
TCF4-240ENST00000568673 ZSCAN31Q96LW9 406 aaPredicted RBP11.59□□□□□ -0.55
TCF4-240ENST00000568673 CARD10Q9BWT7 1032 aa11.59□□□□□ -0.55
TCF4-240ENST00000568673 DBNLQ9UJU6 430 aaKnown RBP11.59□□□□□ -0.55
TCF4-240ENST00000568673 LAMB4A4D0S4 1761 aa11.58□□□□□ -0.56
TCF4-240ENST00000568673 AFDNP55196 1824 aaKnown RBP11.58□□□□□ -0.56
TCF4-240ENST00000568673 A0A0D9SFI3 127 aa11.58□□□□□ -0.56
TCF4-240ENST00000568673 IL2RBP14784 551 aa11.58□□□□□ -0.56
TCF4-240ENST00000568673 KCNJ4P48050 445 aa11.58□□□□□ -0.56
TCF4-240ENST00000568673 LARP6Q9BRS8 491 aaKnown RBP11.58□□□□□ -0.56
TCF4-240ENST00000568673 TMEM63CQ9P1W3 806 aa11.58□□□□□ -0.56
TCF4-240ENST00000568673 NSFL1CQ9UNZ2 370 aaKnown RBP11.58□□□□□ -0.56
TCF4-240ENST00000568673 COL5A2P05997 1499 aaPredicted RBP11.58□□□□□ -0.56
TCF4-240ENST00000568673 PSMA5P28066 241 aa11.57□□□□□ -0.56
TCF4-240ENST00000568673 LMBR1LQ6UX01 489 aa11.57□□□□□ -0.56
TCF4-240ENST00000568673 SH2B1Q9NRF2 756 aaPredicted RBP11.57□□□□□ -0.56
TCF4-240ENST00000568673 RBM27Q9P2N5 1060 aaKnown RBP11.57□□□□□ -0.56
TCF4-240ENST00000568673 SMC3Q9UQE7 1217 aa11.57□□□□□ -0.56
TCF4-240ENST00000568673 RPAP1Q9BWH6 1393 aaPredicted RBP11.57□□□□□ -0.56
TCF4-240ENST00000568673 SLC27A2O14975 620 aa11.57□□□□□ -0.56
TCF4-240ENST00000568673 SYT1P21579 422 aa11.57□□□□□ -0.56
TCF4-240ENST00000568673 FOXO4P98177 505 aa11.57□□□□□ -0.56
TCF4-240ENST00000568673 RNF20Q5VTR2 975 aa11.57□□□□□ -0.56
TCF4-240ENST00000568673 ANP32BQ92688 251 aaKnown RBP11.57□□□□□ -0.56
TCF4-240ENST00000568673 MED23Q9ULK4 1368 aa11.57□□□□□ -0.56
TCF4-240ENST00000568673 STX6O43752 255 aa11.56□□□□□ -0.56
TCF4-240ENST00000568673 ZSCAN22P10073 491 aaPredicted RBP11.56□□□□□ -0.56
TCF4-240ENST00000568673 PRIM1P49642 420 aaKnown RBP11.56□□□□□ -0.56
TCF4-240ENST00000568673 CCDC173Q0VFZ6 552 aa11.56□□□□□ -0.56
TCF4-240ENST00000568673 TTLL7Q6ZT98 887 aa11.56□□□□□ -0.56
TCF4-240ENST00000568673 TRIM44Q96DX7 344 aaPredicted RBP11.56□□□□□ -0.56
TCF4-240ENST00000568673 PPP1R9BQ96SB3 815 aa11.56□□□□□ -0.56
TCF4-240ENST00000568673 CWC25Q9NXE8 425 aaPredicted RBP11.56□□□□□ -0.56
TCF4-240ENST00000568673 LARGE1O95461 756 aa11.56□□□□□ -0.56
TCF4-240ENST00000568673 A1BGP04217 495 aa11.56□□□□□ -0.56
TCF4-240ENST00000568673 LRSAM1Q6UWE0 723 aa11.56□□□□□ -0.56
TCF4-240ENST00000568673 DDX54Q8TDD1 881 aaKnown RBP11.56□□□□□ -0.56
TCF4-240ENST00000568673 JCADQ9P266 1359 aa11.55□□□□□ -0.56
TCF4-240ENST00000568673 UBR2Q8IWV8 1755 aa11.55□□□□□ -0.56
TCF4-240ENST00000568673 TSGA10IPQ3SY00 556 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms