RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 SSH1Q8WYL5 1049 aa20.86■□□□□ 0.93
SCAMP2-208ENST00000566557 MYD88Q99836 296 aa20.86■□□□□ 0.93
SCAMP2-208ENST00000566557 MAP3K2Q9Y2U5 619 aa20.86■□□□□ 0.93
SCAMP2-208ENST00000566557 N4BP2Q86UW6 1770 aaPredicted RBP20.85■□□□□ 0.93
SCAMP2-208ENST00000566557 PI4KAP2A4QPH2 592 aa20.85■□□□□ 0.93
SCAMP2-208ENST00000566557 ATP5J2-PTCD1G3V325 749 aa20.85■□□□□ 0.93
SCAMP2-208ENST00000566557 PARP10Q53GL7 1025 aa20.85■□□□□ 0.93
SCAMP2-208ENST00000566557 PRR5LQ6MZQ0 368 aa20.85■□□□□ 0.93
SCAMP2-208ENST00000566557 ZNF34Q8IZ26 560 aa20.85■□□□□ 0.93
SCAMP2-208ENST00000566557 PI4KAP1Q8N8J0 262 aa20.85■□□□□ 0.93
SCAMP2-208ENST00000566557 JMYQ8N9B5 988 aa20.85■□□□□ 0.93
SCAMP2-208ENST00000566557 ANKRD31Q8N7Z5 1873 aa20.84■□□□□ 0.93
SCAMP2-208ENST00000566557 ALDH1L2Q3SY69 923 aa20.84■□□□□ 0.93
SCAMP2-208ENST00000566557 KSR2Q6VAB6 950 aa20.84■□□□□ 0.93
SCAMP2-208ENST00000566557 PPP1R42Q7Z4L9 355 aa20.84■□□□□ 0.93
SCAMP2-208ENST00000566557 MRPL50Q8N5N7 158 aaKnown RBP20.84■□□□□ 0.93
SCAMP2-208ENST00000566557 NYXQ9GZU5 481 aa20.84■□□□□ 0.93
SCAMP2-208ENST00000566557 NEXNQ0ZGT2 675 aa20.83■□□□□ 0.93
SCAMP2-208ENST00000566557 SUSD4Q5VX71 490 aa20.83■□□□□ 0.93
SCAMP2-208ENST00000566557 TPTE2Q6XPS3 522 aa20.83■□□□□ 0.93
SCAMP2-208ENST00000566557 KIAA1551Q9HCM1 1747 aa20.83■□□□□ 0.92
SCAMP2-208ENST00000566557 PXDNLA1KZ92 1463 aa20.82■□□□□ 0.92
SCAMP2-208ENST00000566557 PRELPP51888 382 aa20.82■□□□□ 0.92
SCAMP2-208ENST00000566557 C9orf131Q5VYM1 1079 aa20.82■□□□□ 0.92
SCAMP2-208ENST00000566557 NLRP10Q86W26 655 aa20.82■□□□□ 0.92
SCAMP2-208ENST00000566557 NUTM1Q86Y26 1132 aa20.82■□□□□ 0.92
SCAMP2-208ENST00000566557 METTL22Q9BUU2 404 aaPredicted RBP20.82■□□□□ 0.92
SCAMP2-208ENST00000566557 IBTKQ9P2D0 1353 aaPredicted RBP20.82■□□□□ 0.92
SCAMP2-208ENST00000566557 TNRC6CQ9HCJ0 1690 aaKnown RBP20.81■□□□□ 0.92
SCAMP2-208ENST00000566557 DPEP1P16444 411 aa20.81■□□□□ 0.92
SCAMP2-208ENST00000566557 RARSP54136 660 aaKnown RBP20.81■□□□□ 0.92
SCAMP2-208ENST00000566557 FSTL1Q12841 308 aa20.81■□□□□ 0.92
SCAMP2-208ENST00000566557 DNAAF4Q8WXU2 420 aa20.81■□□□□ 0.92
SCAMP2-208ENST00000566557 UTP14AQ9BVJ6 771 aaKnown RBP20.81■□□□□ 0.92
SCAMP2-208ENST00000566557 ABCC12Q96J65 1359 aa20.81■□□□□ 0.92
SCAMP2-208ENST00000566557 F6X3S4 739 aa20.8■□□□□ 0.92
SCAMP2-208ENST00000566557 NTSR2O95665 410 aa20.8■□□□□ 0.92
SCAMP2-208ENST00000566557 ISCA1Q9BUE6 129 aa20.8■□□□□ 0.92
SCAMP2-208ENST00000566557 TRMT112Q9UI30 125 aaKnown RBP20.8■□□□□ 0.92
SCAMP2-208ENST00000566557 COL11A2P13942 1736 aaPredicted RBP20.8■□□□□ 0.92
SCAMP2-208ENST00000566557 ERFEQ4G0M1 354 aa20.79■□□□□ 0.92
SCAMP2-208ENST00000566557 SLC4A10Q6U841 1118 aa20.79■□□□□ 0.92
SCAMP2-208ENST00000566557 CHRNA5P30532 468 aa20.78■□□□□ 0.92
SCAMP2-208ENST00000566557 PTPRCP08575 1304 aa20.78■□□□□ 0.92
SCAMP2-208ENST00000566557 KIF16BQ96L93 1317 aa20.78■□□□□ 0.92
SCAMP2-208ENST00000566557 DLEC1Q9Y238 1755 aa20.77■□□□□ 0.92
SCAMP2-208ENST00000566557 PDE6BP35913 854 aa20.77■□□□□ 0.92
SCAMP2-208ENST00000566557 CWF19L2Q2TBE0 894 aaKnown RBP20.77■□□□□ 0.92
SCAMP2-208ENST00000566557 RTL5Q5HYW3 569 aaPredicted RBP20.77■□□□□ 0.92
SCAMP2-208ENST00000566557 C2CD5Q86YS7 1000 aa20.77■□□□□ 0.92
SCAMP2-208ENST00000566557 BRIP1Q9BX63 1249 aa20.77■□□□□ 0.92
SCAMP2-208ENST00000566557 RRAGCQ9HB90 399 aa20.77■□□□□ 0.92
SCAMP2-208ENST00000566557 CWC25Q9NXE8 425 aaPredicted RBP20.77■□□□□ 0.92
SCAMP2-208ENST00000566557 CCDC191Q8NCU4 936 aa20.76■□□□□ 0.91
SCAMP2-208ENST00000566557 LAMB2P55268 1798 aa20.76■□□□□ 0.91
SCAMP2-208ENST00000566557 RNF123Q5XPI4 1314 aa20.76■□□□□ 0.91
SCAMP2-208ENST00000566557 KDM2BQ8NHM5 1336 aa20.76■□□□□ 0.91
SCAMP2-208ENST00000566557 SH3TC1Q8TE82 1336 aa20.76■□□□□ 0.91
SCAMP2-208ENST00000566557 CACNA1SQ13698 1873 aa20.75■□□□□ 0.91
SCAMP2-208ENST00000566557 H0YIN7 160 aa20.75■□□□□ 0.91
SCAMP2-208ENST00000566557 BCAR3O75815 825 aa20.75■□□□□ 0.91
SCAMP2-208ENST00000566557 IGKV5-2P06315 115 aa20.75■□□□□ 0.91
SCAMP2-208ENST00000566557 FRAT1Q92837 279 aaPredicted RBP20.75■□□□□ 0.91
SCAMP2-208ENST00000566557 NOB1Q9ULX3 412 aaKnown RBP20.75■□□□□ 0.91
SCAMP2-208ENST00000566557 DDX60Q8IY21 1712 aaKnown RBP20.75■□□□□ 0.91
SCAMP2-208ENST00000566557 NEURL1BA8MQ27 555 aa20.74■□□□□ 0.91
SCAMP2-208ENST00000566557 BRCA1P38398 1863 aaKnown RBP20.74■□□□□ 0.91
SCAMP2-208ENST00000566557 TRIM28Q13263 835 aaKnown RBP20.74■□□□□ 0.91
SCAMP2-208ENST00000566557 FAM89AQ96GI7 184 aa20.74■□□□□ 0.91
SCAMP2-208ENST00000566557 WDR90Q96KV7 1748 aa20.74■□□□□ 0.91
SCAMP2-208ENST00000566557 RIC1Q4ADV7 1423 aa20.73■□□□□ 0.91
SCAMP2-208ENST00000566557 KCNA3P22001 575 aa20.73■□□□□ 0.91
SCAMP2-208ENST00000566557 SYNE4Q8N205 404 aa20.73■□□□□ 0.91
SCAMP2-208ENST00000566557 LINS1Q8NG48 757 aa20.73■□□□□ 0.91
SCAMP2-208ENST00000566557 ZNF622Q969S3 477 aaKnown RBP eCLIP20.73■□□□□ 0.91
SCAMP2-208ENST00000566557 HCLS1P14317 486 aaPredicted RBP20.72■□□□□ 0.91
SCAMP2-208ENST00000566557 JARID2Q92833 1246 aaPredicted RBP20.72■□□□□ 0.91
SCAMP2-208ENST00000566557 API5Q9BZZ5 524 aaKnown RBP20.72■□□□□ 0.91
SCAMP2-208ENST00000566557 RNF181Q9P0P0 153 aa20.72■□□□□ 0.91
SCAMP2-208ENST00000566557 PIM2Q9P1W9 311 aa20.72■□□□□ 0.91
SCAMP2-208ENST00000566557 BEND3Q5T5X7 828 aa20.71■□□□□ 0.91
SCAMP2-208ENST00000566557 ZBTB38Q8NAP3 1195 aaPredicted RBP20.71■□□□□ 0.91
SCAMP2-208ENST00000566557 SRCIN1Q9C0H9 1055 aa20.71■□□□□ 0.91
SCAMP2-208ENST00000566557 PDZRN3Q9UPQ7 1066 aa20.71■□□□□ 0.91
SCAMP2-208ENST00000566557 IRS4O14654 1257 aaPredicted RBP20.7■□□□□ 0.9
SCAMP2-208ENST00000566557 PCCAP05165 728 aaPredicted RBP20.7■□□□□ 0.9
SCAMP2-208ENST00000566557 BRPF1P55201 1214 aaPredicted RBP20.7■□□□□ 0.9
SCAMP2-208ENST00000566557 DALRD3Q5D0E6 543 aaKnown RBP20.7■□□□□ 0.9
SCAMP2-208ENST00000566557 SMC1BQ8NDV3 1235 aa20.7■□□□□ 0.9
SCAMP2-208ENST00000566557 RPGRQ92834 1020 aaKnown RBP20.7■□□□□ 0.9
SCAMP2-208ENST00000566557 NLRP3Q96P20 1036 aa20.7■□□□□ 0.9
SCAMP2-208ENST00000566557 IPO8O15397 1037 aaKnown RBP20.69■□□□□ 0.9
SCAMP2-208ENST00000566557 GCKRQ14397 625 aa20.69■□□□□ 0.9
SCAMP2-208ENST00000566557 UBE3BQ7Z3V4 1068 aa20.69■□□□□ 0.9
SCAMP2-208ENST00000566557 SRGNP10124 158 aa20.68■□□□□ 0.9
SCAMP2-208ENST00000566557 C3orf67Q6ZVT6 689 aa20.68■□□□□ 0.9
SCAMP2-208ENST00000566557 MASTLQ96GX5 879 aa20.68■□□□□ 0.9
SCAMP2-208ENST00000566557 RCAN3Q9UKA8 241 aa20.68■□□□□ 0.9
SCAMP2-208ENST00000566557 ALDH1L1O75891 902 aa20.67■□□□□ 0.9
SCAMP2-208ENST00000566557 HSPA1AP0DMV8 641 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms