RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 KDM2BQ8NHM5 1336 aa24.55■■□□□ 1.52
CPNE7-208ENST00000566398 TNRC6CQ9HCJ0 1690 aaKnown RBP24.54■■□□□ 1.52
CPNE7-208ENST00000566398 CCDC93Q567U6 631 aa24.54■■□□□ 1.52
CPNE7-208ENST00000566398 ANKRD13DQ6ZTN6 518 aa24.54■■□□□ 1.52
CPNE7-208ENST00000566398 NLRP10Q86W26 655 aa24.54■■□□□ 1.52
CPNE7-208ENST00000566398 LTBP3Q9NS15 1303 aa24.54■■□□□ 1.52
CPNE7-208ENST00000566398 KIF3CO14782 793 aa24.53■■□□□ 1.52
CPNE7-208ENST00000566398 FAM9BQ8IZU0 186 aa24.53■■□□□ 1.52
CPNE7-208ENST00000566398 C7orf43Q8WVR3 580 aa24.53■■□□□ 1.52
CPNE7-208ENST00000566398 GOLGA2Q08379 1002 aa24.52■■□□□ 1.52
CPNE7-208ENST00000566398 NMRK2Q9NPI5 230 aa24.52■■□□□ 1.52
CPNE7-208ENST00000566398 CCDC30Q5VVM6 783 aa24.51■■□□□ 1.51
CPNE7-208ENST00000566398 NLRP3Q96P20 1036 aa24.51■■□□□ 1.51
CPNE7-208ENST00000566398 SALL2Q9Y467 1007 aaPredicted RBP24.51■■□□□ 1.51
CPNE7-208ENST00000566398 SLX4Q8IY92 1834 aa24.5■■□□□ 1.51
CPNE7-208ENST00000566398 HOXA10P31260 410 aaPredicted RBP24.5■■□□□ 1.51
CPNE7-208ENST00000566398 TSPYL6Q8N831 410 aa24.5■■□□□ 1.51
CPNE7-208ENST00000566398 TRMT112Q9UI30 125 aaKnown RBP24.5■■□□□ 1.51
CPNE7-208ENST00000566398 SLC10A5Q5PT55 438 aa24.49■■□□□ 1.51
CPNE7-208ENST00000566398 C3orf67Q6ZVT6 689 aa24.49■■□□□ 1.51
CPNE7-208ENST00000566398 RBM17Q96I25 401 aaKnown RBP24.49■■□□□ 1.51
CPNE7-208ENST00000566398 SH3TC1Q8TE82 1336 aa24.49■■□□□ 1.51
CPNE7-208ENST00000566398 ARFGEF2Q9Y6D5 1785 aa24.49■■□□□ 1.51
CPNE7-208ENST00000566398 RTKN2Q8IZC4 609 aa24.48■■□□□ 1.51
CPNE7-208ENST00000566398 FKBP4Q02790 459 aaKnown RBP eCLIP24.47■■□□□ 1.51
CPNE7-208ENST00000566398 OLFM4Q6UX06 510 aa24.47■■□□□ 1.51
CPNE7-208ENST00000566398 RIC3Q7Z5B4 369 aa24.47■■□□□ 1.51
CPNE7-208ENST00000566398 WDR63Q8IWG1 891 aa24.47■■□□□ 1.51
CPNE7-208ENST00000566398 CRAMP1Q96RY5 1269 aa24.47■■□□□ 1.51
CPNE7-208ENST00000566398 ISCA1Q9BUE6 129 aa24.47■■□□□ 1.51
CPNE7-208ENST00000566398 PHAXQ9H814 394 aaKnown RBP24.47■■□□□ 1.51
CPNE7-208ENST00000566398 FANCIQ9NVI1 1328 aa24.46■■□□□ 1.51
CPNE7-208ENST00000566398 ATP5J2-PTCD1G3V325 749 aa24.46■■□□□ 1.51
CPNE7-208ENST00000566398 TWISTNBQ3B726 338 aaPredicted RBP24.46■■□□□ 1.51
CPNE7-208ENST00000566398 GLTPD2A6NH11 291 aa24.45■■□□□ 1.5
CPNE7-208ENST00000566398 DDX58O95786 925 aaKnown RBP24.45■■□□□ 1.5
CPNE7-208ENST00000566398 HCLS1P14317 486 aaPredicted RBP24.45■■□□□ 1.5
CPNE7-208ENST00000566398 CC2D2BQ6DHV5 1058 aa24.45■■□□□ 1.5
CPNE7-208ENST00000566398 STK31Q9BXU1 1019 aa24.45■■□□□ 1.5
CPNE7-208ENST00000566398 PPEF1O14829 653 aaPredicted RBP24.44■■□□□ 1.5
CPNE7-208ENST00000566398 TOMM70O94826 608 aa24.44■■□□□ 1.5
CPNE7-208ENST00000566398 C16orf71Q8IYS4 520 aaPredicted RBP24.44■■□□□ 1.5
CPNE7-208ENST00000566398 SYNE4Q8N205 404 aa24.44■■□□□ 1.5
CPNE7-208ENST00000566398 ZNF428Q96B54 188 aa24.44■■□□□ 1.5
CPNE7-208ENST00000566398 ANKRD36CQ5JPF3 1778 aa24.44■■□□□ 1.5
CPNE7-208ENST00000566398 SBF1O95248 1867 aa24.43■■□□□ 1.5
CPNE7-208ENST00000566398 TRIM28Q13263 835 aaKnown RBP24.43■■□□□ 1.5
CPNE7-208ENST00000566398 FER1L6Q2WGJ9 1857 aa24.43■■□□□ 1.5
CPNE7-208ENST00000566398 TIAM2Q8IVF5 1701 aa24.42■■□□□ 1.5
CPNE7-208ENST00000566398 DPY19L2Q6NUT2 758 aa24.42■■□□□ 1.5
CPNE7-208ENST00000566398 RRAGCQ9HB90 399 aa24.42■■□□□ 1.5
CPNE7-208ENST00000566398 ZNF277Q9NRM2 450 aaPredicted RBP24.42■■□□□ 1.5
CPNE7-208ENST00000566398 ABCC4O15439 1325 aa24.41■■□□□ 1.5
CPNE7-208ENST00000566398 CACNA1SQ13698 1873 aa24.41■■□□□ 1.5
CPNE7-208ENST00000566398 GRIPAP1Q4V328 841 aa24.41■■□□□ 1.5
CPNE7-208ENST00000566398 FAM89AQ96GI7 184 aa24.41■■□□□ 1.5
CPNE7-208ENST00000566398 MYD88Q99836 296 aa24.41■■□□□ 1.5
CPNE7-208ENST00000566398 TCERG1O14776 1098 aaKnown RBP24.4■■□□□ 1.5
CPNE7-208ENST00000566398 PSMD1Q99460 953 aa24.4■■□□□ 1.5
CPNE7-208ENST00000566398 TMX4Q9H1E5 349 aaPredicted RBP24.4■■□□□ 1.5
CPNE7-208ENST00000566398 SNED1Q8TER0 1413 aa24.4■■□□□ 1.5
CPNE7-208ENST00000566398 DDX46Q7L014 1031 aaKnown RBP24.39■■□□□ 1.49
CPNE7-208ENST00000566398 RBM46Q8TBY0 533 aaKnown RBP24.38■■□□□ 1.49
CPNE7-208ENST00000566398 MYH16Q9H6N6 1097 aa24.38■■□□□ 1.49
CPNE7-208ENST00000566398 VEGFAP15692 232 aaPredicted RBP24.37■■□□□ 1.49
CPNE7-208ENST00000566398 IARSP41252 1262 aaKnown RBP24.37■■□□□ 1.49
CPNE7-208ENST00000566398 RTL5Q5HYW3 569 aaPredicted RBP24.37■■□□□ 1.49
CPNE7-208ENST00000566398 CCDC191Q8NCU4 936 aa24.37■■□□□ 1.49
CPNE7-208ENST00000566398 METTL22Q9BUU2 404 aaPredicted RBP24.37■■□□□ 1.49
CPNE7-208ENST00000566398 MAP3K2Q9Y2U5 619 aa24.37■■□□□ 1.49
CPNE7-208ENST00000566398 ATP6V0A2Q9Y487 856 aa24.37■■□□□ 1.49
CPNE7-208ENST00000566398 IRS4O14654 1257 aaPredicted RBP24.36■■□□□ 1.49
CPNE7-208ENST00000566398 BBOX1O75936 387 aa24.36■■□□□ 1.49
CPNE7-208ENST00000566398 SLC4A2P04920 1241 aa24.36■■□□□ 1.49
CPNE7-208ENST00000566398 HSPA6P17066 643 aa24.36■■□□□ 1.49
CPNE7-208ENST00000566398 EXOSC9Q06265 439 aaKnown RBP24.36■■□□□ 1.49
CPNE7-208ENST00000566398 KSR2Q6VAB6 950 aa24.36■■□□□ 1.49
CPNE7-208ENST00000566398 ZBTB38Q8NAP3 1195 aaPredicted RBP24.36■■□□□ 1.49
CPNE7-208ENST00000566398 CWC25Q9NXE8 425 aaPredicted RBP24.36■■□□□ 1.49
CPNE7-208ENST00000566398 PI4KAP2A4QPH2 592 aa24.35■■□□□ 1.49
CPNE7-208ENST00000566398 HSP90B1P14625 803 aaKnown RBP24.35■■□□□ 1.49
CPNE7-208ENST00000566398 GRAPQ13588 217 aa24.35■■□□□ 1.49
CPNE7-208ENST00000566398 SLC51AQ86UW1 340 aa24.35■■□□□ 1.49
CPNE7-208ENST00000566398 PI4KAP1Q8N8J0 262 aa24.35■■□□□ 1.49
CPNE7-208ENST00000566398 GRAPLQ8TC17 118 aaPredicted RBP24.35■■□□□ 1.49
CPNE7-208ENST00000566398 SPINK5Q9NQ38 1064 aaPredicted RBP24.35■■□□□ 1.49
CPNE7-208ENST00000566398 SF3B3Q15393 1217 aaKnown RBP24.34■■□□□ 1.49
CPNE7-208ENST00000566398 NEXNQ0ZGT2 675 aa24.33■■□□□ 1.49
CPNE7-208ENST00000566398 JDP2Q8WYK2 163 aa24.33■■□□□ 1.49
CPNE7-208ENST00000566398 CEP350Q5VT06 3117 aa24.32■■□□□ 1.48
CPNE7-208ENST00000566398 VAMP4O75379 141 aa24.32■■□□□ 1.48
CPNE7-208ENST00000566398 DDNO94850 711 aaPredicted RBP24.32■■□□□ 1.48
CPNE7-208ENST00000566398 FSTL1Q12841 308 aa24.32■■□□□ 1.48
CPNE7-208ENST00000566398 G2E3Q7L622 706 aa24.32■■□□□ 1.48
CPNE7-208ENST00000566398 ZNF541Q9H0D2 1346 aa24.32■■□□□ 1.48
CPNE7-208ENST00000566398 PCCAP05165 728 aaPredicted RBP24.31■■□□□ 1.48
CPNE7-208ENST00000566398 FLIIQ13045 1269 aa24.31■■□□□ 1.48
CPNE7-208ENST00000566398 TMC4Q7Z404 712 aa24.31■■□□□ 1.48
CPNE7-208ENST00000566398 SP8Q8IXZ3 490 aa24.31■■□□□ 1.48
CPNE7-208ENST00000566398 ZNF521Q96K83 1311 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms