RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 RNF20Q5VTR2 975 aa25.7■■□□□ 1.7
SPSB3-208ENST00000566339 FOXD4L3Q6VB84 417 aaPredicted RBP25.7■■□□□ 1.7
SPSB3-208ENST00000566339 PI4KAP1Q8N8J0 262 aa25.7■■□□□ 1.7
SPSB3-208ENST00000566339 MAP4K1Q92918 833 aa25.7■■□□□ 1.7
SPSB3-208ENST00000566339 CAVIN2O95810 425 aa25.69■■□□□ 1.7
SPSB3-208ENST00000566339 IFIT2P09913 472 aaKnown RBP25.69■■□□□ 1.7
SPSB3-208ENST00000566339 DNM1Q05193 864 aaKnown RBP25.69■■□□□ 1.7
SPSB3-208ENST00000566339 CHAF1AQ13111 956 aaPredicted RBP25.69■■□□□ 1.7
SPSB3-208ENST00000566339 SCAND2PQ9GZW5 306 aaPredicted RBP25.69■■□□□ 1.7
SPSB3-208ENST00000566339 PHF8Q9UPP1 1060 aa25.69■■□□□ 1.7
SPSB3-208ENST00000566339 KIF3AQ9Y496 699 aa25.69■■□□□ 1.7
SPSB3-208ENST00000566339 UTYO14607 1347 aa25.69■■□□□ 1.7
SPSB3-208ENST00000566339 SLIT3O75094 1523 aa25.69■■□□□ 1.7
SPSB3-208ENST00000566339 TSGA10IPQ3SY00 556 aa25.69■■□□□ 1.7
SPSB3-208ENST00000566339 HMG20BQ9P0W2 317 aa25.69■■□□□ 1.7
SPSB3-208ENST00000566339 SPG7Q9UQ90 795 aa25.69■■□□□ 1.7
SPSB3-208ENST00000566339 AKAP4Q5JQC9 854 aa25.68■■□□□ 1.7
SPSB3-208ENST00000566339 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.68■■□□□ 1.7
SPSB3-208ENST00000566339 DDX19AQ9NUU7 478 aaKnown RBP25.68■■□□□ 1.7
SPSB3-208ENST00000566339 CHPF2Q9P2E5 772 aa25.68■■□□□ 1.7
SPSB3-208ENST00000566339 JCADQ9P266 1359 aa25.68■■□□□ 1.7
SPSB3-208ENST00000566339 LARGE1O95461 756 aa25.67■■□□□ 1.7
SPSB3-208ENST00000566339 PTH1RQ03431 593 aa25.67■■□□□ 1.7
SPSB3-208ENST00000566339 MAP3K11Q16584 847 aa25.67■■□□□ 1.7
SPSB3-208ENST00000566339 PRPF40BQ6NWY9 871 aaKnown RBP25.67■■□□□ 1.7
SPSB3-208ENST00000566339 TTC12Q9H892 705 aaPredicted RBP25.67■■□□□ 1.7
SPSB3-208ENST00000566339 CREB3L3Q68CJ9 461 aa25.67■■□□□ 1.7
SPSB3-208ENST00000566339 GIMAP6Q6P9H5 292 aa25.67■■□□□ 1.7
SPSB3-208ENST00000566339 RBM43Q6ZSC3 357 aaKnown RBP25.67■■□□□ 1.7
SPSB3-208ENST00000566339 GIGYF1O75420 1035 aaPredicted RBP25.66■■□□□ 1.7
SPSB3-208ENST00000566339 ME3Q16798 604 aa25.66■■□□□ 1.7
SPSB3-208ENST00000566339 AMOTQ4VCS5 1084 aa25.66■■□□□ 1.7
SPSB3-208ENST00000566339 KSR2Q6VAB6 950 aa25.66■■□□□ 1.7
SPSB3-208ENST00000566339 NUP62CLQ9H1M0 184 aa25.66■■□□□ 1.7
SPSB3-208ENST00000566339 HEG1Q9ULI3 1381 aa25.66■■□□□ 1.7
SPSB3-208ENST00000566339 ADAMTS7Q9UKP4 1686 aa25.65■■□□□ 1.7
SPSB3-208ENST00000566339 NUTM2GQ5VZR2 741 aa25.65■■□□□ 1.7
SPSB3-208ENST00000566339 LARP1BQ659C4 914 aaKnown RBP25.65■■□□□ 1.7
SPSB3-208ENST00000566339 RBM8AQ9Y5S9 174 aaKnown RBP25.65■■□□□ 1.7
SPSB3-208ENST00000566339 RFX7Q2KHR2 1363 aa25.65■■□□□ 1.7
SPSB3-208ENST00000566339 SIPA1L3O60292 1781 aaPredicted RBP25.65■■□□□ 1.7
SPSB3-208ENST00000566339 MRC1P22897 1456 aa25.64■■□□□ 1.7
SPSB3-208ENST00000566339 ST3GAL1Q11201 340 aa25.64■■□□□ 1.7
SPSB3-208ENST00000566339 NPHP3Q7Z494 1330 aa25.64■■□□□ 1.7
SPSB3-208ENST00000566339 EIF2S2P20042 333 aaKnown RBP25.64■■□□□ 1.69
SPSB3-208ENST00000566339 SYCP1Q15431 976 aa25.64■■□□□ 1.69
SPSB3-208ENST00000566339 ADCK5Q3MIX3 580 aa25.64■■□□□ 1.69
SPSB3-208ENST00000566339 DCCP43146 1447 aa25.63■■□□□ 1.69
SPSB3-208ENST00000566339 TEFQ10587 303 aa25.63■■□□□ 1.69
SPSB3-208ENST00000566339 PLEKHO1Q53GL0 409 aaPredicted RBP25.63■■□□□ 1.69
SPSB3-208ENST00000566339 UTP14CQ5TAP6 766 aaKnown RBP25.63■■□□□ 1.69
SPSB3-208ENST00000566339 C9orf78Q9NZ63 289 aaPredicted RBP25.63■■□□□ 1.69
SPSB3-208ENST00000566339 KRT32Q14532 448 aa25.62■■□□□ 1.69
SPSB3-208ENST00000566339 TRPM3Q9HCF6 1732 aaPredicted RBP25.62■■□□□ 1.69
SPSB3-208ENST00000566339 VPS37CA5D8V6 355 aaPredicted RBP25.61■■□□□ 1.69
SPSB3-208ENST00000566339 BLOC1S2Q6QNY1 142 aa25.61■■□□□ 1.69
SPSB3-208ENST00000566339 KCNH5Q8NCM2 988 aa25.61■■□□□ 1.69
SPSB3-208ENST00000566339 LINS1Q8NG48 757 aa25.61■■□□□ 1.69
SPSB3-208ENST00000566339 ZNF830Q96NB3 372 aaPredicted RBP25.61■■□□□ 1.69
SPSB3-208ENST00000566339 PHLPP1O60346 1717 aa25.61■■□□□ 1.69
SPSB3-208ENST00000566339 MED23Q9ULK4 1368 aa25.61■■□□□ 1.69
SPSB3-208ENST00000566339 SLC27A2O14975 620 aa25.61■■□□□ 1.69
SPSB3-208ENST00000566339 TTC6Q86TZ1 520 aa25.61■■□□□ 1.69
SPSB3-208ENST00000566339 BTBD11A6QL63 1104 aa25.6■■□□□ 1.69
SPSB3-208ENST00000566339 TYRO3Q06418 890 aa25.6■■□□□ 1.69
SPSB3-208ENST00000566339 TICAM2Q86XR7 235 aa25.6■■□□□ 1.69
SPSB3-208ENST00000566339 LTV1Q96GA3 475 aaPredicted RBP25.6■■□□□ 1.69
SPSB3-208ENST00000566339 TPCN1Q9ULQ1 816 aa25.6■■□□□ 1.69
SPSB3-208ENST00000566339 DDX58O95786 925 aaKnown RBP25.59■■□□□ 1.69
SPSB3-208ENST00000566339 RPS6KB1P23443 525 aa25.59■■□□□ 1.69
SPSB3-208ENST00000566339 BRINP3Q76B58 766 aa25.59■■□□□ 1.69
SPSB3-208ENST00000566339 KCNJ4P48050 445 aa25.59■■□□□ 1.69
SPSB3-208ENST00000566339 G3BP1Q13283 466 aaKnown RBP eCLIP25.59■■□□□ 1.69
SPSB3-208ENST00000566339 NBPF6Q5VWK0 638 aa25.59■■□□□ 1.69
SPSB3-208ENST00000566339 ILDR2Q71H61 639 aa25.59■■□□□ 1.69
SPSB3-208ENST00000566339 AACSQ86V21 672 aa25.59■■□□□ 1.69
SPSB3-208ENST00000566339 USHBP1Q8N6Y0 703 aa25.59■■□□□ 1.69
SPSB3-208ENST00000566339 TDRD7Q8NHU6 1098 aaKnown RBP25.59■■□□□ 1.69
SPSB3-208ENST00000566339 NBPF4Q96M43 638 aa25.59■■□□□ 1.69
SPSB3-208ENST00000566339 KCNF1Q9H3M0 494 aa25.59■■□□□ 1.69
SPSB3-208ENST00000566339 MRVI1Q9Y6F6 885 aa25.59■■□□□ 1.69
SPSB3-208ENST00000566339 MST1RQ04912 1400 aa25.59■■□□□ 1.69
SPSB3-208ENST00000566339 CTIFO43310 598 aaKnown RBP25.58■■□□□ 1.69
SPSB3-208ENST00000566339 ZNF710Q8N1W2 664 aa25.58■■□□□ 1.69
SPSB3-208ENST00000566339 CLSTN2Q9H4D0 955 aa25.58■■□□□ 1.69
SPSB3-208ENST00000566339 MAP3K2Q9Y2U5 619 aa25.58■■□□□ 1.69
SPSB3-208ENST00000566339 AP5Z1O43299 807 aa25.57■■□□□ 1.68
SPSB3-208ENST00000566339 CPA1P15085 419 aa25.57■■□□□ 1.68
SPSB3-208ENST00000566339 CDC25BP30305 580 aa25.57■■□□□ 1.68
SPSB3-208ENST00000566339 PRDM4Q9UKN5 801 aa25.57■■□□□ 1.68
SPSB3-208ENST00000566339 GRM8O00222 908 aa25.56■■□□□ 1.68
SPSB3-208ENST00000566339 NMIQ13287 307 aaPredicted RBP25.56■■□□□ 1.68
SPSB3-208ENST00000566339 USPL1Q5W0Q7 1092 aa25.56■■□□□ 1.68
SPSB3-208ENST00000566339 TNMDQ9H2S6 317 aa25.56■■□□□ 1.68
SPSB3-208ENST00000566339 LGR6Q9HBX8 967 aa25.56■■□□□ 1.68
SPSB3-208ENST00000566339 GOLGA6L4A6NEF3 574 aa25.56■■□□□ 1.68
SPSB3-208ENST00000566339 ZSCAN16Q9H4T2 348 aaPredicted RBP25.56■■□□□ 1.68
SPSB3-208ENST00000566339 RNMTO43148 476 aaKnown RBP25.55■■□□□ 1.68
SPSB3-208ENST00000566339 ANKRD7Q92527 254 aa25.55■■□□□ 1.68
SPSB3-208ENST00000566339 PXDNQ92626 1479 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms