RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	GYS1	P13807	737 aa		12.57	□□□□□ -0.4
TCF4-231	ENST00000566279	COPS6	Q7L5N1	327 aa		12.57	□□□□□ -0.4
TCF4-231	ENST00000566279	BCL2L12	Q9HB09	334 aa		12.57	□□□□□ -0.4
TCF4-231	ENST00000566279	DBF4	Q9UBU7	674 aa	Predicted RBP	12.57	□□□□□ -0.4
TCF4-231	ENST00000566279	ADCY9	O60503	1353 aa		12.57	□□□□□ -0.4
TCF4-231	ENST00000566279	HLF	Q16534	295 aa		12.56	□□□□□ -0.4
TCF4-231	ENST00000566279	MFAP1	P55081	439 aa	Known RBP	12.56	□□□□□ -0.4
TCF4-231	ENST00000566279	BICDL1	Q6ZP65	573 aa		12.56	□□□□□ -0.4
TCF4-231	ENST00000566279	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.56	□□□□□ -0.4
TCF4-231	ENST00000566279	DNAAF4	Q8WXU2	420 aa		12.56	□□□□□ -0.4
TCF4-231	ENST00000566279	NARF	Q9UHQ1	456 aa		12.56	□□□□□ -0.4
TCF4-231	ENST00000566279	LRRFIP2	Q9Y608	721 aa	Known RBP	12.56	□□□□□ -0.4
TCF4-231	ENST00000566279	PI4KAP2	A4QPH2	592 aa		12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	SMARCA5	O60264	1052 aa	Predicted RBP	12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	ZPR1	O75312	459 aa		12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	CAMTA2	O94983	1202 aa		12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	ADRA2B	P18089	450 aa		12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	ATP8B2	P98198	1209 aa		12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	BEND3	Q5T5X7	828 aa		12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	PI4KAP1	Q8N8J0	262 aa		12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	SRCIN1	Q9C0H9	1055 aa		12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	ERBB4	Q15303	1308 aa		12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	ARFGEF2	Q9Y6D5	1785 aa		12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	NUP98	P52948	1817 aa		12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	PNMA6E	A0A0J9YXQ4	647 aa		12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	GSPT1	P15170	499 aa	Known RBP	12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	FLAD1	Q8NFF5	587 aa		12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	DAXX	Q9UER7	740 aa	Predicted RBP	12.55	□□□□□ -0.4
TCF4-231	ENST00000566279	APBB1	O00213	710 aa		12.54	□□□□□ -0.4
TCF4-231	ENST00000566279	UBTFL1	P0CB47	393 aa	Predicted RBP	12.54	□□□□□ -0.4
TCF4-231	ENST00000566279	TTC22	Q5TAA0	569 aa		12.54	□□□□□ -0.4
TCF4-231	ENST00000566279	TBC1D9B	Q66K14	1250 aa		12.54	□□□□□ -0.4
TCF4-231	ENST00000566279	C22orf23	Q9BZE7	217 aa		12.54	□□□□□ -0.4
TCF4-231	ENST00000566279	MTFR1L	Q9H019	292 aa		12.53	□□□□□ -0.4
TCF4-231	ENST00000566279	MAP3K15	Q6ZN16	1313 aa		12.53	□□□□□ -0.4
TCF4-231	ENST00000566279	HMGB2	P26583	209 aa	Known RBP	12.53	□□□□□ -0.4
TCF4-231	ENST00000566279	KIF6	Q6ZMV9	814 aa		12.53	□□□□□ -0.4
TCF4-231	ENST00000566279	HYPK	Q9NX55	129 aa		12.53	□□□□□ -0.4
TCF4-231	ENST00000566279	COL24A1	Q17RW2	1714 aa		12.52	□□□□□ -0.4
TCF4-231	ENST00000566279		A0A087WZG4	1122 aa		12.52	□□□□□ -0.4
TCF4-231	ENST00000566279	FAM177B	A6PVY3	158 aa		12.52	□□□□□ -0.4
TCF4-231	ENST00000566279	GPT	P24298	496 aa		12.52	□□□□□ -0.4
TCF4-231	ENST00000566279	PTGER2	P43116	358 aa		12.52	□□□□□ -0.4
TCF4-231	ENST00000566279	TBC1D9	Q6ZT07	1266 aa		12.52	□□□□□ -0.4
TCF4-231	ENST00000566279	EXOC6B	Q9Y2D4	811 aa		12.52	□□□□□ -0.4
TCF4-231	ENST00000566279	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.52	□□□□□ -0.41
TCF4-231	ENST00000566279	GOLGB1	Q14789	3259 aa	Known RBP	12.52	□□□□□ -0.41
TCF4-231	ENST00000566279	MMP10	P09238	476 aa		12.52	□□□□□ -0.41
TCF4-231	ENST00000566279	DDR1	Q08345	913 aa		12.52	□□□□□ -0.41
TCF4-231	ENST00000566279	NFIX	Q14938	502 aa		12.52	□□□□□ -0.41
TCF4-231	ENST00000566279	KSR2	Q6VAB6	950 aa		12.52	□□□□□ -0.41
TCF4-231	ENST00000566279	CCDC24	Q8N4L8	307 aa		12.52	□□□□□ -0.41
TCF4-231	ENST00000566279	MAP3K2	Q9Y2U5	619 aa		12.52	□□□□□ -0.41
TCF4-231	ENST00000566279	ANKRD36C	Q5JPF3	1778 aa		12.52	□□□□□ -0.41
TCF4-231	ENST00000566279	CDC45	O75419	566 aa		12.51	□□□□□ -0.41
TCF4-231	ENST00000566279	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.51	□□□□□ -0.41
TCF4-231	ENST00000566279	SSH3	Q8TE77	659 aa		12.51	□□□□□ -0.41
TCF4-231	ENST00000566279	AFDN	P55196	1824 aa	Known RBP	12.51	□□□□□ -0.41
TCF4-231	ENST00000566279	BECN1	Q14457	450 aa		12.5	□□□□□ -0.41
TCF4-231	ENST00000566279	NBR1	Q14596	966 aa		12.5	□□□□□ -0.41
TCF4-231	ENST00000566279	ANKRD13D	Q6ZTN6	518 aa		12.5	□□□□□ -0.41
TCF4-231	ENST00000566279	SLC16A10	Q8TF71	515 aa		12.5	□□□□□ -0.41
TCF4-231	ENST00000566279	SGIP1	Q9BQI5	828 aa		12.5	□□□□□ -0.41
TCF4-231	ENST00000566279	UBN2	Q6ZU65	1347 aa		12.5	□□□□□ -0.41
TCF4-231	ENST00000566279	ATP5J2-PTCD1	G3V325	749 aa		12.5	□□□□□ -0.41
TCF4-231	ENST00000566279	ALDH1L1	O75891	902 aa		12.5	□□□□□ -0.41
TCF4-231	ENST00000566279	RBM25	P49756	843 aa	Known RBP	12.5	□□□□□ -0.41
TCF4-231	ENST00000566279	POLA2	Q14181	598 aa		12.5	□□□□□ -0.41
TCF4-231	ENST00000566279	RIC3	Q7Z5B4	369 aa		12.5	□□□□□ -0.41
TCF4-231	ENST00000566279	KLHL34	Q8N239	644 aa		12.5	□□□□□ -0.41
TCF4-231	ENST00000566279	SPON1	Q9HCB6	807 aa		12.5	□□□□□ -0.41
TCF4-231	ENST00000566279	SALL3	Q9BXA9	1300 aa		12.49	□□□□□ -0.41
TCF4-231	ENST00000566279	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.49	□□□□□ -0.41
TCF4-231	ENST00000566279	PPP1R42	Q7Z4L9	355 aa		12.49	□□□□□ -0.41
TCF4-231	ENST00000566279	LRRCC1	Q9C099	1032 aa		12.49	□□□□□ -0.41
TCF4-231	ENST00000566279	OSBPL3	Q9H4L5	887 aa		12.49	□□□□□ -0.41
TCF4-231	ENST00000566279	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
TCF4-231	ENST00000566279	POLRMT	O00411	1230 aa	Known RBP	12.49	□□□□□ -0.41
TCF4-231	ENST00000566279	TM4SF1	P30408	202 aa		12.49	□□□□□ -0.41
TCF4-231	ENST00000566279	NLGN1	Q8N2Q7	840 aa		12.49	□□□□□ -0.41
TCF4-231	ENST00000566279	PLBD2	Q8NHP8	589 aa		12.49	□□□□□ -0.41
TCF4-231	ENST00000566279	MYD88	Q99836	296 aa		12.49	□□□□□ -0.41
TCF4-231	ENST00000566279	ERVV-1	B6SEH8	477 aa		12.48	□□□□□ -0.41
TCF4-231	ENST00000566279	PDE1A	P54750	535 aa		12.48	□□□□□ -0.41
TCF4-231	ENST00000566279	TBC1D2	Q9BYX2	928 aa		12.48	□□□□□ -0.41
TCF4-231	ENST00000566279	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.48	□□□□□ -0.41
TCF4-231	ENST00000566279	CARMIL3	Q8ND23	1372 aa		12.48	□□□□□ -0.41
TCF4-231	ENST00000566279	DDX58	O95786	925 aa	Known RBP	12.47	□□□□□ -0.41
TCF4-231	ENST00000566279	SDS	P20132	328 aa		12.47	□□□□□ -0.41
TCF4-231	ENST00000566279	RTL5	Q5HYW3	569 aa	Predicted RBP	12.47	□□□□□ -0.41
TCF4-231	ENST00000566279	ZNF652	Q9Y2D9	606 aa		12.47	□□□□□ -0.41
TCF4-231	ENST00000566279	CWF19L2	Q2TBE0	894 aa	Known RBP	12.47	□□□□□ -0.41
TCF4-231	ENST00000566279	LINS1	Q8NG48	757 aa		12.47	□□□□□ -0.41
TCF4-231	ENST00000566279	JARID2	Q92833	1246 aa	Predicted RBP	12.47	□□□□□ -0.41
TCF4-231	ENST00000566279	LRP5	O75197	1615 aa		12.47	□□□□□ -0.41
TCF4-231	ENST00000566279	SRGAP3	O43295	1099 aa		12.46	□□□□□ -0.41
TCF4-231	ENST00000566279	SERPINB2	P05120	415 aa		12.46	□□□□□ -0.41
TCF4-231	ENST00000566279	POLD1	P28340	1107 aa		12.46	□□□□□ -0.41
TCF4-231	ENST00000566279	SUSD4	Q5VX71	490 aa		12.46	□□□□□ -0.41

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