RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 CHD1LQ86WJ1 897 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 ANKRD44Q8N8A2 993 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 CERKQ8TCT0 537 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 XAGE3Q8WTP9 111 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 DNAAF4Q8WXU2 420 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 JARID2Q92833 1246 aaPredicted RBP7.78□□□□□ -1.16
CHD9-217ENST00000565832 NGLY1Q96IV0 654 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 KDM4CQ9H3R0 1056 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 DDX21Q9NR30 783 aaKnown RBP eCLIP7.78□□□□□ -1.16
CHD9-217ENST00000565832 LRRFIP2Q9Y608 721 aaKnown RBP7.78□□□□□ -1.16
CHD9-217ENST00000565832 GOLGB1Q14789 3259 aaKnown RBP7.78□□□□□ -1.16
CHD9-217ENST00000565832 SHANK3Q9BYB0 1731 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 NBPF26B4DH59 902 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 NBPF14Q5TI25 921 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 NBPF10Q6P3W6 841 aaKnown RBP7.78□□□□□ -1.16
CHD9-217ENST00000565832 LRP10Q7Z4F1 713 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 NBPF15Q8N660 670 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 ACSBG1Q96GR2 724 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 SRCIN1Q9C0H9 1055 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 SPATA31A1Q5TZJ5 1347 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 C5P01031 1676 aa7.78□□□□□ -1.16
CHD9-217ENST00000565832 GNAI2P04899 355 aa7.77□□□□□ -1.17
CHD9-217ENST00000565832 COL14A1Q05707 1796 aaKnown RBP7.77□□□□□ -1.17
CHD9-217ENST00000565832 FAM161AQ3B820 660 aa7.77□□□□□ -1.17
CHD9-217ENST00000565832 KSR2Q6VAB6 950 aa7.77□□□□□ -1.17
CHD9-217ENST00000565832 COL22A1Q8NFW1 1626 aaPredicted RBP7.77□□□□□ -1.17
CHD9-217ENST00000565832 OTUD7AQ8TE49 926 aaPredicted RBP7.77□□□□□ -1.17
CHD9-217ENST00000565832 CHMP4BQ9H444 224 aaKnown RBP7.77□□□□□ -1.17
CHD9-217ENST00000565832 DCTPP1Q9H773 170 aa7.77□□□□□ -1.17
CHD9-217ENST00000565832 ATG3Q9NT62 314 aa7.77□□□□□ -1.17
CHD9-217ENST00000565832 HYPKQ9NX55 129 aa7.77□□□□□ -1.17
CHD9-217ENST00000565832 TMOD3Q9NYL9 352 aa7.77□□□□□ -1.17
CHD9-217ENST00000565832 ATP10DQ9P241 1426 aa7.77□□□□□ -1.17
CHD9-217ENST00000565832 PARP4Q9UKK3 1724 aaKnown RBP7.77□□□□□ -1.17
CHD9-217ENST00000565832 FECHP22830 423 aa7.77□□□□□ -1.17
CHD9-217ENST00000565832 HSPA1LP34931 641 aa7.77□□□□□ -1.17
CHD9-217ENST00000565832 FAM98CQ17RN3 349 aaKnown RBP7.77□□□□□ -1.17
CHD9-217ENST00000565832 RIC3Q7Z5B4 369 aa7.77□□□□□ -1.17
CHD9-217ENST00000565832 RPAP2Q8IXW5 612 aaPredicted RBP7.77□□□□□ -1.17
CHD9-217ENST00000565832 IL27Q8NEV9 243 aa7.77□□□□□ -1.17
CHD9-217ENST00000565832 EXOC6BQ9Y2D4 811 aa7.77□□□□□ -1.17
CHD9-217ENST00000565832 GNPATO15228 680 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 MAP2K5Q13163 448 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 FAM182BQ5T319 152 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 MARCH10Q8NA82 808 aaPredicted RBP7.76□□□□□ -1.17
CHD9-217ENST00000565832 CCDC102AQ96A19 550 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 GCC1Q96CN9 775 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 SLC4A9Q96Q91 983 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 PLSCR2Q9NRY7 297 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 SPATA31A5Q5VU36 1347 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 SPATA31A7Q8IWB4 1347 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 ATP5J2-PTCD1G3V325 749 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 IGKV5-2P06315 115 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 UBTFL1P0CB47 393 aaPredicted RBP7.76□□□□□ -1.17
CHD9-217ENST00000565832 DDB1Q16531 1140 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 TTLL7Q6ZT98 887 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 ANKRD13DQ6ZTN6 518 aa7.76□□□□□ -1.17
CHD9-217ENST00000565832 ZNF330Q9Y3S2 320 aaPredicted RBP7.76□□□□□ -1.17
CHD9-217ENST00000565832 MRC1P22897 1456 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 DISP2A7MBM2 1401 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 TOGARAM1Q9Y4F4 1720 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 IRF6O14896 467 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 KCNQ2O43526 872 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 SLC34A2O95436 690 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 GNAI3P08754 354 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 ATP8B2P98198 1209 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 HIC1Q14526 733 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 RTL5Q5HYW3 569 aaPredicted RBP7.75□□□□□ -1.17
CHD9-217ENST00000565832 PTF1AQ7RTS3 328 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 PPP1R42Q7Z4L9 355 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 UNC5CLQ8IV45 518 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 DNAJC10Q8IXB1 793 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 MYD88Q99836 296 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 PLCH1Q4KWH8 1693 aa7.75□□□□□ -1.17
CHD9-217ENST00000565832 ERICH6Q7L0X2 663 aa7.74□□□□□ -1.17
CHD9-217ENST00000565832 KAZALD1Q96I82 304 aa7.74□□□□□ -1.17
CHD9-217ENST00000565832 ARXQ96QS3 562 aa7.74□□□□□ -1.17
CHD9-217ENST00000565832 ANO8Q9HCE9 1232 aaPredicted RBP7.74□□□□□ -1.17
CHD9-217ENST00000565832 C9orf78Q9NZ63 289 aaPredicted RBP7.74□□□□□ -1.17
CHD9-217ENST00000565832 TSHZ3Q63HK5 1081 aa7.74□□□□□ -1.17
CHD9-217ENST00000565832 CHMP4AQ9BY43 222 aa7.74□□□□□ -1.17
CHD9-217ENST00000565832 BCL9LQ86UU0 1499 aa7.74□□□□□ -1.17
CHD9-217ENST00000565832 ITGB4P16144 1822 aa7.74□□□□□ -1.17
CHD9-217ENST00000565832 SRGAP3O43295 1099 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 KCNQ4P56696 695 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 MYT1Q01538 1121 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 PTGDRQ13258 359 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 PLEKHM2Q8IWE5 1019 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 LINS1Q8NG48 757 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 ZBTB3Q9H5J0 574 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 PLEKHG2Q9H7P9 1386 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 JCADQ9P266 1359 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 SLIT2O94813 1529 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 KCPQ6ZWJ8 1503 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 NEURL1BA8MQ27 555 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 DDX58O95786 925 aaKnown RBP7.73□□□□□ -1.17
CHD9-217ENST00000565832 EPHA10Q5JZY3 1008 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 SUCLG2Q96I99 432 aa7.73□□□□□ -1.17
CHD9-217ENST00000565832 METTL22Q9BUU2 404 aaPredicted RBP7.73□□□□□ -1.17
CHD9-217ENST00000565832 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms