RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 BEGAINQ9BUH8 593 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 DMGDHQ9UI17 866 aaKnown RBP3.85□□□□□ -1.79
CHD9-216ENST00000565803 CTDP1Q9Y5B0 961 aaPredicted RBP3.85□□□□□ -1.79
CHD9-216ENST00000565803 COL4A3BPQ9Y5P4 624 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 RBBP6Q7Z6E9 1792 aaKnown RBP3.85□□□□□ -1.79
CHD9-216ENST00000565803 SBNO1A3KN83 1393 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 MDM2Q00987 491 aaPredicted RBP3.85□□□□□ -1.79
CHD9-216ENST00000565803 MYBPC2Q14324 1141 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 CC2D1AQ6P1N0 951 aaPredicted RBP3.85□□□□□ -1.79
CHD9-216ENST00000565803 HELBQ8NG08 1087 aaPredicted RBP3.85□□□□□ -1.79
CHD9-216ENST00000565803 CCSER2Q9H7U1 834 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 CHMP3Q9Y3E7 222 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 ARFGEF1Q9Y6D6 1849 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 NRDCO43847 1150 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 HIC1Q14526 733 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 ZKSCAN2Q63HK3 967 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 NOP9Q86U38 636 aaKnown RBP3.85□□□□□ -1.79
CHD9-216ENST00000565803 ANO2Q9NQ90 1003 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 SFMBT1Q9UHJ3 866 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 EID1Q9Y6B2 187 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 LY75O60449 1722 aa3.85□□□□□ -1.79
CHD9-216ENST00000565803 FAM83GA6ND36 823 aa3.84□□□□□ -1.79
CHD9-216ENST00000565803 MCCD1P59942 119 aaPredicted RBP3.84□□□□□ -1.79
CHD9-216ENST00000565803 NT5DC4Q86YG4 428 aa3.84□□□□□ -1.79
CHD9-216ENST00000565803 CCDC85AQ96PX6 553 aaPredicted RBP3.84□□□□□ -1.79
CHD9-216ENST00000565803 BACH2Q9BYV9 841 aa3.84□□□□□ -1.79
CHD9-216ENST00000565803 SCUBE2Q9NQ36 999 aa3.84□□□□□ -1.79
CHD9-216ENST00000565803 ATP10DQ9P241 1426 aa3.84□□□□□ -1.79
CHD9-216ENST00000565803 TLDC2A0PJX2 215 aa3.84□□□□□ -1.79
CHD9-216ENST00000565803 SNPHO15079 494 aa3.84□□□□□ -1.79
CHD9-216ENST00000565803 ZRANB2O95218 330 aaKnown RBP eCLIP3.84□□□□□ -1.79
CHD9-216ENST00000565803 RHBDL3P58872 404 aa3.84□□□□□ -1.79
CHD9-216ENST00000565803 FBXO31Q5XUX0 539 aaPredicted RBP3.84□□□□□ -1.79
CHD9-216ENST00000565803 STK11IPQ8N1F8 1099 aa3.84□□□□□ -1.79
CHD9-216ENST00000565803 KCNB2Q92953 911 aa3.84□□□□□ -1.79
CHD9-216ENST00000565803 TPX2Q9ULW0 747 aaKnown RBP3.84□□□□□ -1.79
CHD9-216ENST00000565803 MRPL42Q9Y6G3 142 aaKnown RBP3.84□□□□□ -1.79
CHD9-216ENST00000565803 CLTCL1P53675 1640 aa3.84□□□□□ -1.79
CHD9-216ENST00000565803 AP1G2O75843 785 aa3.84□□□□□ -1.8
CHD9-216ENST00000565803 SLC4A8Q2Y0W8 1093 aa3.84□□□□□ -1.8
CHD9-216ENST00000565803 SH3D19Q5HYK7 790 aa3.84□□□□□ -1.8
CHD9-216ENST00000565803 SLAIN1Q8ND83 568 aa3.84□□□□□ -1.8
CHD9-216ENST00000565803 PPP1R12CQ9BZL4 782 aa3.84□□□□□ -1.8
CHD9-216ENST00000565803 TFIP11Q9UBB9 837 aaKnown RBP3.84□□□□□ -1.8
CHD9-216ENST00000565803 FAM198AQ9UFP1 575 aa3.84□□□□□ -1.8
CHD9-216ENST00000565803 RIMS2Q9UQ26 1411 aa3.84□□□□□ -1.8
CHD9-216ENST00000565803 KIF1BO60333 1816 aa3.84□□□□□ -1.8
CHD9-216ENST00000565803 GOLIM4O00461 696 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 PLIN1O60240 522 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 FCHSD2O94868 740 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 FECHP22830 423 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 SSFA2P28290 1259 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 GNL2Q13823 731 aaKnown RBP3.83□□□□□ -1.8
CHD9-216ENST00000565803 AMOTL1Q8IY63 956 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 TMEM87AQ8NBN3 555 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 TSC1Q92574 1164 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 CEP89Q96ST8 783 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHD9-216ENST00000565803 GNL3LQ9NVN8 582 aaKnown RBP3.83□□□□□ -1.8
CHD9-216ENST00000565803 FAM13BQ9NYF5 915 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 COL18A1P39060 1754 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 ERBB3P21860 1342 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 PALM3A6NDB9 673 aaPredicted RBP3.83□□□□□ -1.8
CHD9-216ENST00000565803 PRC1O43663 620 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 SRPK2P78362 688 aaKnown RBP3.83□□□□□ -1.8
CHD9-216ENST00000565803 SF3B2Q13435 895 aaKnown RBP3.83□□□□□ -1.8
CHD9-216ENST00000565803 ODR4Q5SWX8 454 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 LARGE2Q8N3Y3 721 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 NLRP7Q8WX94 980 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 PAGR1Q9BTK6 254 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 SCNN1AP37088 669 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 MAP3K9P80192 1104 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 TCEAL1Q15170 157 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 KLRG1Q96E93 195 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 MRS2Q9HD23 443 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 IFT57Q9NWB7 429 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 HDAC5Q9UQL6 1122 aa3.83□□□□□ -1.8
CHD9-216ENST00000565803 GNPATO15228 680 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 CC2D1BQ5T0F9 858 aaKnown RBP3.82□□□□□ -1.8
CHD9-216ENST00000565803 KRT27Q7Z3Y8 459 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 MAP3K20Q9NYL2 800 aaKnown RBP3.82□□□□□ -1.8
CHD9-216ENST00000565803 ADGRG1Q9Y653 693 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 E9PCH4 1651 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 CCDC144AA2RUR9 1427 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 PPP1R12AO14974 1030 aaPredicted RBP3.82□□□□□ -1.8
CHD9-216ENST00000565803 HRO43593 1189 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 EIF3JO75822 258 aaKnown RBP3.82□□□□□ -1.8
CHD9-216ENST00000565803 RFC5P40937 340 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 TBX4P57082 545 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 VAC14Q08AM6 782 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 FERMT3Q86UX7 667 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 C1orf131Q8NDD1 294 aaKnown RBP3.82□□□□□ -1.8
CHD9-216ENST00000565803 FAM161BQ96MY7 647 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 PHOX2BQ99453 314 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 ADAM33Q9BZ11 813 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 PIF1Q9H611 641 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 PPCSQ9HAB8 311 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 CDHR5Q9HBB8 845 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 LHX6Q9UPM6 363 aa3.82□□□□□ -1.8
CHD9-216ENST00000565803 LRPPRCP42704 1394 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms