RNA–Protein interactions for RNA: ENST00000565034.1

NIP7-206, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-206ENST00000565034 OTUD7AQ8TE49 926 aaPredicted RBP18.07■□□□□ 0.48
NIP7-206ENST00000565034 COPRSQ9NQ92 184 aa18.07■□□□□ 0.48
NIP7-206ENST00000565034 CDHR2Q9BYE9 1310 aa18.06■□□□□ 0.48
NIP7-206ENST00000565034 RGL2O15211 777 aa18.06■□□□□ 0.48
NIP7-206ENST00000565034 CDC45O75419 566 aa18.06■□□□□ 0.48
NIP7-206ENST00000565034 GSPT1P15170 499 aaKnown RBP18.06■□□□□ 0.48
NIP7-206ENST00000565034 FOXO4P98177 505 aa18.06■□□□□ 0.48
NIP7-206ENST00000565034 ZNF772Q68DY9 489 aaPredicted RBP18.06■□□□□ 0.48
NIP7-206ENST00000565034 TAF1LQ8IZX4 1826 aa18.06■□□□□ 0.48
NIP7-206ENST00000565034 RC3H1Q5TC82 1133 aaKnown RBP18.05■□□□□ 0.48
NIP7-206ENST00000565034 CLASRPQ8N2M8 674 aaKnown RBP18.05■□□□□ 0.48
NIP7-206ENST00000565034 ZBTB38Q8NAP3 1195 aaPredicted RBP18.05■□□□□ 0.48
NIP7-206ENST00000565034 ARXQ96QS3 562 aa18.05■□□□□ 0.48
NIP7-206ENST00000565034 PLA2G12BQ9BX93 195 aa18.05■□□□□ 0.48
NIP7-206ENST00000565034 USP42Q9H9J4 1324 aaKnown RBP18.04■□□□□ 0.48
NIP7-206ENST00000565034 MYH3P11055 1940 aa18.04■□□□□ 0.48
NIP7-206ENST00000565034 SCN7AQ01118 1682 aa18.04■□□□□ 0.48
NIP7-206ENST00000565034 RFX5P48382 616 aaPredicted RBP18.04■□□□□ 0.48
NIP7-206ENST00000565034 HLFQ16534 295 aa18.04■□□□□ 0.48
NIP7-206ENST00000565034 NLRP10Q86W26 655 aa18.04■□□□□ 0.48
NIP7-206ENST00000565034 JARID2Q92833 1246 aaPredicted RBP18.04■□□□□ 0.48
NIP7-206ENST00000565034 IL1RAPL2Q9NP60 686 aa18.04■□□□□ 0.48
NIP7-206ENST00000565034 PA2G4Q9UQ80 394 aaKnown RBP18.04■□□□□ 0.48
NIP7-206ENST00000565034 LMBR1LQ6UX01 489 aa18.03■□□□□ 0.48
NIP7-206ENST00000565034 ZNF34Q8IZ26 560 aa18.03■□□□□ 0.48
NIP7-206ENST00000565034 DDRGK1Q96HY6 314 aa18.03■□□□□ 0.48
NIP7-206ENST00000565034 BCL11BQ9C0K0 894 aaPredicted RBP18.03■□□□□ 0.48
NIP7-206ENST00000565034 TBC1D2BQ9UPU7 963 aa18.03■□□□□ 0.48
NIP7-206ENST00000565034 TTC41PQ6P2S7 1318 aa18.02■□□□□ 0.48
NIP7-206ENST00000565034 LAMB2P55268 1798 aa18.02■□□□□ 0.48
NIP7-206ENST00000565034 SEC24BO95487 1268 aa18.02■□□□□ 0.48
NIP7-206ENST00000565034 RBM6P78332 1123 aaKnown RBP18.02■□□□□ 0.48
NIP7-206ENST00000565034 FAM196AQ6ZSG2 479 aa18.02■□□□□ 0.48
NIP7-206ENST00000565034 LINC00116Q8NCU8 138 aa18.02■□□□□ 0.48
NIP7-206ENST00000565034 BCL11AQ9H165 835 aa18.02■□□□□ 0.48
NIP7-206ENST00000565034 ZNF652Q9Y2D9 606 aa18.02■□□□□ 0.48
NIP7-206ENST00000565034 CAMTA2O94983 1202 aa18.01■□□□□ 0.47
NIP7-206ENST00000565034 SDSP20132 328 aa18.01■□□□□ 0.47
NIP7-206ENST00000565034 PTPN12Q05209 780 aaKnown RBP18.01■□□□□ 0.47
NIP7-206ENST00000565034 PARP10Q53GL7 1025 aa18.01■□□□□ 0.47
NIP7-206ENST00000565034 CASC1Q6TDU7 716 aa18.01■□□□□ 0.47
NIP7-206ENST00000565034 KRT27Q7Z3Y8 459 aa18.01■□□□□ 0.47
NIP7-206ENST00000565034 GPATCH3Q96I76 525 aa18.01■□□□□ 0.47
NIP7-206ENST00000565034 IPO9Q96P70 1041 aaKnown RBP18.01■□□□□ 0.47
NIP7-206ENST00000565034 AK9Q5TCS8 1911 aa18.01■□□□□ 0.47
NIP7-206ENST00000565034 SASH1O94885 1247 aa18■□□□□ 0.47
NIP7-206ENST00000565034 GPTP24298 496 aa18■□□□□ 0.47
NIP7-206ENST00000565034 TBC1D9Q6ZT07 1266 aa18■□□□□ 0.47
NIP7-206ENST00000565034 PTF1AQ7RTS3 328 aa18■□□□□ 0.47
NIP7-206ENST00000565034 NUTM1Q86Y26 1132 aa18■□□□□ 0.47
NIP7-206ENST00000565034 AK7Q96M32 723 aa18■□□□□ 0.47
NIP7-206ENST00000565034 CCNL1Q9UK58 526 aaPredicted RBP18■□□□□ 0.47
NIP7-206ENST00000565034 C4BP0C0L5 1744 aa17.99■□□□□ 0.47
NIP7-206ENST00000565034 IFIT2P09913 472 aaKnown RBP17.99■□□□□ 0.47
NIP7-206ENST00000565034 FAM182BQ5T319 152 aa17.99■□□□□ 0.47
NIP7-206ENST00000565034 CLEC4GQ6UXB4 293 aa17.99■□□□□ 0.47
NIP7-206ENST00000565034 TBC1D32Q96NH3 1257 aa17.99■□□□□ 0.47
NIP7-206ENST00000565034 FBXO3Q9UK99 471 aa17.99■□□□□ 0.47
NIP7-206ENST00000565034 CHMP3Q9Y3E7 222 aa17.99■□□□□ 0.47
NIP7-206ENST00000565034 ERC2O15083 957 aa17.98■□□□□ 0.47
NIP7-206ENST00000565034 RPS6KA4O75676 772 aa17.98■□□□□ 0.47
NIP7-206ENST00000565034 CSF1RP07333 972 aa17.98■□□□□ 0.47
NIP7-206ENST00000565034 HSP90B1P14625 803 aaKnown RBP17.98■□□□□ 0.47
NIP7-206ENST00000565034 HMGB2P26583 209 aaKnown RBP17.98■□□□□ 0.47
NIP7-206ENST00000565034 MFAP1P55081 439 aaKnown RBP17.98■□□□□ 0.47
NIP7-206ENST00000565034 RTL5Q5HYW3 569 aaPredicted RBP17.98■□□□□ 0.47
NIP7-206ENST00000565034 FAM89AQ96GI7 184 aa17.98■□□□□ 0.47
NIP7-206ENST00000565034 GLRX3O76003 335 aaKnown RBP17.97■□□□□ 0.47
NIP7-206ENST00000565034 CIAO1O76071 339 aa17.97■□□□□ 0.47
NIP7-206ENST00000565034 AACSQ86V21 672 aa17.97■□□□□ 0.47
NIP7-206ENST00000565034 SIL1Q9H173 461 aa17.97■□□□□ 0.47
NIP7-206ENST00000565034 TRMT112Q9UI30 125 aaKnown RBP17.97■□□□□ 0.47
NIP7-206ENST00000565034 UBN2Q6ZU65 1347 aa17.97■□□□□ 0.47
NIP7-206ENST00000565034 IL15P40933 162 aaPredicted RBP17.96■□□□□ 0.47
NIP7-206ENST00000565034 CCDC57Q2TAC2 916 aa17.96■□□□□ 0.47
NIP7-206ENST00000565034 KLHDC4Q8TBB5 520 aa17.96■□□□□ 0.47
NIP7-206ENST00000565034 PI4K2BQ8TCG2 481 aa17.96■□□□□ 0.47
NIP7-206ENST00000565034 GPR108Q9NPR9 543 aa17.96■□□□□ 0.47
NIP7-206ENST00000565034 ECHDC1Q9NTX5 307 aa17.96■□□□□ 0.47
NIP7-206ENST00000565034 DDX60Q8IY21 1712 aaKnown RBP17.95■□□□□ 0.46
NIP7-206ENST00000565034 EYA2O00167 538 aa17.95■□□□□ 0.46
NIP7-206ENST00000565034 IRS4O14654 1257 aaPredicted RBP17.95■□□□□ 0.46
NIP7-206ENST00000565034 PDE8AO60658 829 aa17.95■□□□□ 0.46
NIP7-206ENST00000565034 UTP14AQ9BVJ6 771 aaKnown RBP17.95■□□□□ 0.46
NIP7-206ENST00000565034 C22orf23Q9BZE7 217 aa17.95■□□□□ 0.46
NIP7-206ENST00000565034 SH3TC1Q8TE82 1336 aa17.95■□□□□ 0.46
NIP7-206ENST00000565034 CTSWP56202 376 aa17.94■□□□□ 0.46
NIP7-206ENST00000565034 SLC27A3Q5K4L6 730 aa17.94■□□□□ 0.46
NIP7-206ENST00000565034 EAF2Q96CJ1 260 aaPredicted RBP17.94■□□□□ 0.46
NIP7-206ENST00000565034 C4AP0C0L4 1744 aa17.94■□□□□ 0.46
NIP7-206ENST00000565034 COL24A1Q17RW2 1714 aa17.94■□□□□ 0.46
NIP7-206ENST00000565034 RBM25P49756 843 aaKnown RBP17.93■□□□□ 0.46
NIP7-206ENST00000565034 IFIT5Q13325 482 aaKnown RBP17.93■□□□□ 0.46
NIP7-206ENST00000565034 TNNI3KQ59H18 835 aa17.93■□□□□ 0.46
NIP7-206ENST00000565034 SUSD4Q5VX71 490 aa17.93■□□□□ 0.46
NIP7-206ENST00000565034 TSHZ3Q63HK5 1081 aa17.93■□□□□ 0.46
NIP7-206ENST00000565034 NARFQ9UHQ1 456 aa17.93■□□□□ 0.46
NIP7-206ENST00000565034 NIP7Q9Y221 180 aaKnown RBP eCLIP17.93■□□□□ 0.46
NIP7-206ENST00000565034 RTCBQ9Y3I0 505 aaKnown RBP17.93■□□□□ 0.46
NIP7-206ENST00000565034 FPGT-TNNI3KV9GXZ4 949 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms