RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 ATF5Q9Y2D1 282 aaPredicted RBP9.45□□□□□ -0.9
GINS3-205ENST00000564814 COG6Q9Y2V7 657 aa9.45□□□□□ -0.9
GINS3-205ENST00000564814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.44□□□□□ -0.9
GINS3-205ENST00000564814 PIP4K2AP48426 406 aaPredicted RBP9.44□□□□□ -0.9
GINS3-205ENST00000564814 KCNQ4P56696 695 aa9.44□□□□□ -0.9
GINS3-205ENST00000564814 AIMP1Q12904 312 aaKnown RBP9.44□□□□□ -0.9
GINS3-205ENST00000564814 MTX1Q13505 466 aa9.44□□□□□ -0.9
GINS3-205ENST00000564814 GCKRQ14397 625 aa9.44□□□□□ -0.9
GINS3-205ENST00000564814 ZNF827Q17R98 1081 aa9.44□□□□□ -0.9
GINS3-205ENST00000564814 AMIGO3Q86WK7 504 aa9.44□□□□□ -0.9
GINS3-205ENST00000564814 CRBNQ96SW2 442 aa9.44□□□□□ -0.9
GINS3-205ENST00000564814 PLA2G12BQ9BX93 195 aa9.44□□□□□ -0.9
GINS3-205ENST00000564814 USP44Q9H0E7 712 aa9.44□□□□□ -0.9
GINS3-205ENST00000564814 BCL2L12Q9HB09 334 aa9.44□□□□□ -0.9
GINS3-205ENST00000564814 CDHR2Q9BYE9 1310 aa9.44□□□□□ -0.9
GINS3-205ENST00000564814 MYH3P11055 1940 aa9.44□□□□□ -0.9
GINS3-205ENST00000564814 PNPLA7Q6ZV29 1317 aa9.43□□□□□ -0.9
GINS3-205ENST00000564814 H7C1W4 665 aa9.43□□□□□ -0.9
GINS3-205ENST00000564814 GRM8O00222 908 aa9.43□□□□□ -0.9
GINS3-205ENST00000564814 PCCAP05165 728 aaPredicted RBP9.43□□□□□ -0.9
GINS3-205ENST00000564814 CASP7P55210 303 aa9.43□□□□□ -0.9
GINS3-205ENST00000564814 HLFQ16534 295 aa9.43□□□□□ -0.9
GINS3-205ENST00000564814 NLRP10Q86W26 655 aa9.43□□□□□ -0.9
GINS3-205ENST00000564814 ITPRIPQ8IWB1 547 aa9.43□□□□□ -0.9
GINS3-205ENST00000564814 SLC16A10Q8TF71 515 aa9.43□□□□□ -0.9
GINS3-205ENST00000564814 ZBTB3Q9H5J0 574 aa9.43□□□□□ -0.9
GINS3-205ENST00000564814 CWC25Q9NXE8 425 aaPredicted RBP9.43□□□□□ -0.9
GINS3-205ENST00000564814 UBN2Q6ZU65 1347 aa9.42□□□□□ -0.9
GINS3-205ENST00000564814 ZPR1O75312 459 aa9.42□□□□□ -0.9
GINS3-205ENST00000564814 GYS1P13807 737 aa9.42□□□□□ -0.9
GINS3-205ENST00000564814 HSP90B1P14625 803 aaKnown RBP9.42□□□□□ -0.9
GINS3-205ENST00000564814 RFC4P35249 363 aa9.42□□□□□ -0.9
GINS3-205ENST00000564814 RABL6Q3YEC7 729 aaPredicted RBP9.42□□□□□ -0.9
GINS3-205ENST00000564814 SLC4A10Q6U841 1118 aa9.42□□□□□ -0.9
GINS3-205ENST00000564814 ZBTB38Q8NAP3 1195 aaPredicted RBP9.42□□□□□ -0.9
GINS3-205ENST00000564814 EXOC6Q8TAG9 804 aa9.42□□□□□ -0.9
GINS3-205ENST00000564814 MEIS3Q99687 375 aa9.42□□□□□ -0.9
GINS3-205ENST00000564814 MYD88Q99836 296 aa9.42□□□□□ -0.9
GINS3-205ENST00000564814 TBC1D2BQ9UPU7 963 aa9.42□□□□□ -0.9
GINS3-205ENST00000564814 DDX60Q8IY21 1712 aaKnown RBP9.42□□□□□ -0.9
GINS3-205ENST00000564814 CARMIL3Q8ND23 1372 aa9.41□□□□□ -0.9
GINS3-205ENST00000564814 TM4SF1P30408 202 aa9.41□□□□□ -0.9
GINS3-205ENST00000564814 PTGER2P43116 358 aa9.41□□□□□ -0.9
GINS3-205ENST00000564814 PRELPP51888 382 aa9.41□□□□□ -0.9
GINS3-205ENST00000564814 HDAC1Q13547 482 aaPredicted RBP9.41□□□□□ -0.9
GINS3-205ENST00000564814 CWF19L2Q2TBE0 894 aaKnown RBP9.41□□□□□ -0.9
GINS3-205ENST00000564814 PPP1R42Q7Z4L9 355 aa9.41□□□□□ -0.9
GINS3-205ENST00000564814 RPAP2Q8IXW5 612 aaPredicted RBP9.41□□□□□ -0.9
GINS3-205ENST00000564814 NLGN1Q8N2Q7 840 aa9.41□□□□□ -0.9
GINS3-205ENST00000564814 TFCP2L1Q9NZI6 479 aa9.41□□□□□ -0.9
GINS3-205ENST00000564814 RTL9Q8NET4 1388 aa9.4□□□□□ -0.9
GINS3-205ENST00000564814 NTSR2O95665 410 aa9.4□□□□□ -0.9
GINS3-205ENST00000564814 GNAI2P04899 355 aa9.4□□□□□ -0.9
GINS3-205ENST00000564814 UBTFL1P0CB47 393 aaPredicted RBP9.4□□□□□ -0.9
GINS3-205ENST00000564814 C1QBPQ07021 282 aaKnown RBP9.4□□□□□ -0.9
GINS3-205ENST00000564814 FKBP8Q14318 412 aa9.4□□□□□ -0.9
GINS3-205ENST00000564814 SLC10A5Q5PT55 438 aa9.4□□□□□ -0.9
GINS3-205ENST00000564814 USPL1Q5W0Q7 1092 aa9.4□□□□□ -0.9
GINS3-205ENST00000564814 COL23A1Q86Y22 540 aaPredicted RBP9.4□□□□□ -0.9
GINS3-205ENST00000564814 NYXQ9GZU5 481 aa9.4□□□□□ -0.9
GINS3-205ENST00000564814 PPP4R2Q9NY27 417 aa9.4□□□□□ -0.9
GINS3-205ENST00000564814 SH3TC1Q8TE82 1336 aa9.39□□□□□ -0.91
GINS3-205ENST00000564814 NBPF7P0C2Y1 421 aaPredicted RBP9.39□□□□□ -0.91
GINS3-205ENST00000564814 ANKRD44Q8N8A2 993 aa9.39□□□□□ -0.91
GINS3-205ENST00000564814 KAZALD1Q96I82 304 aa9.39□□□□□ -0.91
GINS3-205ENST00000564814 MTFR1LQ9H019 292 aa9.39□□□□□ -0.91
GINS3-205ENST00000564814 C9orf78Q9NZ63 289 aaPredicted RBP9.39□□□□□ -0.91
GINS3-205ENST00000564814 NIP7Q9Y221 180 aaKnown RBP eCLIP9.39□□□□□ -0.91
GINS3-205ENST00000564814 ZNF330Q9Y3S2 320 aaPredicted RBP9.39□□□□□ -0.91
GINS3-205ENST00000564814 KIF13BQ9NQT8 1826 aa9.39□□□□□ -0.91
GINS3-205ENST00000564814 CSF1RP07333 972 aa9.38□□□□□ -0.91
GINS3-205ENST00000564814 POLA2Q14181 598 aa9.38□□□□□ -0.91
GINS3-205ENST00000564814 NFIXQ14938 502 aa9.38□□□□□ -0.91
GINS3-205ENST00000564814 TBC1D9BQ66K14 1250 aa9.38□□□□□ -0.91
GINS3-205ENST00000564814 CEP85Q6P2H3 762 aa9.38□□□□□ -0.91
GINS3-205ENST00000564814 SSH3Q8TE77 659 aa9.38□□□□□ -0.91
GINS3-205ENST00000564814 SETDB2Q96T68 719 aa9.38□□□□□ -0.91
GINS3-205ENST00000564814 UTP14AQ9BVJ6 771 aaKnown RBP9.38□□□□□ -0.91
GINS3-205ENST00000564814 FHDC1Q9C0D6 1143 aaPredicted RBP9.38□□□□□ -0.91
GINS3-205ENST00000564814 SRP68Q9UHB9 627 aaKnown RBP9.38□□□□□ -0.91
GINS3-205ENST00000564814 FBXO3Q9UK99 471 aa9.38□□□□□ -0.91
GINS3-205ENST00000564814 KDM2BQ8NHM5 1336 aa9.37□□□□□ -0.91
GINS3-205ENST00000564814 KLRG2A4D1S0 409 aaPredicted RBP9.37□□□□□ -0.91
GINS3-205ENST00000564814 ATP5J2-PTCD1G3V325 749 aa9.37□□□□□ -0.91
GINS3-205ENST00000564814 POLRMTO00411 1230 aaKnown RBP9.37□□□□□ -0.91
GINS3-205ENST00000564814 PDE8AO60658 829 aa9.37□□□□□ -0.91
GINS3-205ENST00000564814 PHF14O94880 888 aa9.37□□□□□ -0.91
GINS3-205ENST00000564814 ATP8B2P98198 1209 aa9.37□□□□□ -0.91
GINS3-205ENST00000564814 SUSD4Q5VX71 490 aa9.37□□□□□ -0.91
GINS3-205ENST00000564814 TPTE2Q6XPS3 522 aa9.37□□□□□ -0.91
GINS3-205ENST00000564814 SYT17Q9BSW7 474 aa9.37□□□□□ -0.91
GINS3-205ENST00000564814 PCDHB15Q9Y5E8 787 aa9.37□□□□□ -0.91
GINS3-205ENST00000564814 HMMRO75330 724 aa9.36□□□□□ -0.91
GINS3-205ENST00000564814 FOXO4P98177 505 aa9.36□□□□□ -0.91
GINS3-205ENST00000564814 SF3B3Q15393 1217 aaKnown RBP9.36□□□□□ -0.91
GINS3-205ENST00000564814 UBE3BQ7Z3V4 1068 aa9.36□□□□□ -0.91
GINS3-205ENST00000564814 SIRT2Q8IXJ6 389 aa9.36□□□□□ -0.91
GINS3-205ENST00000564814 SMC5Q8IY18 1101 aa9.36□□□□□ -0.91
GINS3-205ENST00000564814 KLHL34Q8N239 644 aa9.36□□□□□ -0.91
GINS3-205ENST00000564814 SUCLG2Q96I99 432 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms