RNA–Protein interactions for RNA: ENST00000564793.1

CFDP1-204, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-204ENST00000564793 MTFR1Q15390 333 aa7.91□□□□□ -1.14
CFDP1-204ENST00000564793 MRPL14Q6P1L8 145 aaKnown RBP7.91□□□□□ -1.14
CFDP1-204ENST00000564793 SLC9A9Q8IVB4 645 aa7.91□□□□□ -1.14
CFDP1-204ENST00000564793 SCG3Q8WXD2 468 aaKnown RBP7.91□□□□□ -1.14
CFDP1-204ENST00000564793 PURBQ96QR8 312 aaKnown RBP7.91□□□□□ -1.14
CFDP1-204ENST00000564793 RTEL1-TNFRSF6BF6WH68 1400 aa7.91□□□□□ -1.14
CFDP1-204ENST00000564793 NPATQ14207 1427 aa7.91□□□□□ -1.14
CFDP1-204ENST00000564793 PRDM15P57071 1507 aaPredicted RBP7.91□□□□□ -1.14
CFDP1-204ENST00000564793 SHANK2Q9UPX8 1470 aa7.9□□□□□ -1.14
CFDP1-204ENST00000564793 SPINT1O43278 529 aa7.9□□□□□ -1.14
CFDP1-204ENST00000564793 C21orf2O43822 256 aa7.9□□□□□ -1.14
CFDP1-204ENST00000564793 IGFBP4P22692 258 aa7.9□□□□□ -1.14
CFDP1-204ENST00000564793 FKBP5Q13451 457 aaPredicted RBP7.9□□□□□ -1.14
CFDP1-204ENST00000564793 MKNK1Q9BUB5 465 aa7.9□□□□□ -1.14
CFDP1-204ENST00000564793 POLMQ9NP87 494 aaPredicted RBP7.9□□□□□ -1.14
CFDP1-204ENST00000564793 NEURL4Q96JN8 1562 aa7.89□□□□□ -1.15
CFDP1-204ENST00000564793 MYOM3Q5VTT5 1437 aa7.89□□□□□ -1.15
CFDP1-204ENST00000564793 UHRF1BP1Q6BDS2 1440 aa7.89□□□□□ -1.15
CFDP1-204ENST00000564793 AXIN1O15169 862 aa7.89□□□□□ -1.15
CFDP1-204ENST00000564793 PPP1R12BO60237 982 aaPredicted RBP7.89□□□□□ -1.15
CFDP1-204ENST00000564793 CTSOP43234 321 aaPredicted RBP7.89□□□□□ -1.15
CFDP1-204ENST00000564793 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
CFDP1-204ENST00000564793 CTC1Q2NKJ3 1217 aa7.89□□□□□ -1.15
CFDP1-204ENST00000564793 FOXD4L5Q5VV16 416 aaPredicted RBP7.89□□□□□ -1.15
CFDP1-204ENST00000564793 TRIM46Q7Z4K8 759 aa7.89□□□□□ -1.15
CFDP1-204ENST00000564793 ZSCAN10Q96SZ4 725 aaPredicted RBP7.89□□□□□ -1.15
CFDP1-204ENST00000564793 IQSEC3Q9UPP2 1182 aaPredicted RBP7.89□□□□□ -1.15
CFDP1-204ENST00000564793 ATAD2Q6PL18 1390 aa7.88□□□□□ -1.15
CFDP1-204ENST00000564793 ST8SIA5O15466 376 aa7.88□□□□□ -1.15
CFDP1-204ENST00000564793 NBPF15Q8N660 670 aa7.88□□□□□ -1.15
CFDP1-204ENST00000564793 C1orf216Q8TAB5 229 aa7.88□□□□□ -1.15
CFDP1-204ENST00000564793 IVNS1ABPQ9Y6Y0 642 aa7.88□□□□□ -1.15
CFDP1-204ENST00000564793 LTBP4Q8N2S1 1624 aa7.88□□□□□ -1.15
CFDP1-204ENST00000564793 ABCC3O15438 1527 aa7.88□□□□□ -1.15
CFDP1-204ENST00000564793 TCOF1Q13428 1488 aaKnown RBP7.87□□□□□ -1.15
CFDP1-204ENST00000564793 PTPRKQ15262 1439 aa7.87□□□□□ -1.15
CFDP1-204ENST00000564793 NCOA1Q15788 1441 aa7.87□□□□□ -1.15
CFDP1-204ENST00000564793 SPAG9O60271 1321 aaKnown RBP7.87□□□□□ -1.15
CFDP1-204ENST00000564793 ZNF644Q9H582 1327 aaPredicted RBP7.87□□□□□ -1.15
CFDP1-204ENST00000564793 PATL2C9JE40 543 aaKnown RBP7.87□□□□□ -1.15
CFDP1-204ENST00000564793 CDK2AP1O14519 115 aa7.87□□□□□ -1.15
CFDP1-204ENST00000564793 SCARF1Q14162 830 aa7.87□□□□□ -1.15
CFDP1-204ENST00000564793 LAPTM4AQ15012 233 aa7.87□□□□□ -1.15
CFDP1-204ENST00000564793 SLC27A3Q5K4L6 730 aa7.87□□□□□ -1.15
CFDP1-204ENST00000564793 TMEM214Q6NUQ4 689 aaKnown RBP7.87□□□□□ -1.15
CFDP1-204ENST00000564793 TAS1R3Q7RTX0 852 aa7.87□□□□□ -1.15
CFDP1-204ENST00000564793 SPATA31D1Q6ZQQ2 1576 aa7.87□□□□□ -1.15
CFDP1-204ENST00000564793 PZPP20742 1482 aa7.87□□□□□ -1.15
CFDP1-204ENST00000564793 PLA2R1Q13018 1463 aa7.87□□□□□ -1.15
CFDP1-204ENST00000564793 MIA2Q96PC5 1412 aa7.86□□□□□ -1.15
CFDP1-204ENST00000564793 UBR1Q8IWV7 1749 aa7.86□□□□□ -1.15
CFDP1-204ENST00000564793 FOXO3O43524 673 aa7.86□□□□□ -1.15
CFDP1-204ENST00000564793 GPC1P35052 558 aa7.86□□□□□ -1.15
CFDP1-204ENST00000564793 RNF144AP50876 292 aaPredicted RBP7.86□□□□□ -1.15
CFDP1-204ENST00000564793 PSMA6P60900 246 aaKnown RBP7.86□□□□□ -1.15
CFDP1-204ENST00000564793 MLECQ14165 292 aa7.86□□□□□ -1.15
CFDP1-204ENST00000564793 CAPN12Q6ZSI9 719 aa7.86□□□□□ -1.15
CFDP1-204ENST00000564793 TXNDC2Q86VQ3 553 aa7.86□□□□□ -1.15
CFDP1-204ENST00000564793 PPARGC1BQ86YN6 1023 aaKnown RBP7.86□□□□□ -1.15
CFDP1-204ENST00000564793 ZNF295-AS1Q8N0V1 137 aa7.86□□□□□ -1.15
CFDP1-204ENST00000564793 CRIPAKQ8N1N5 446 aa7.86□□□□□ -1.15
CFDP1-204ENST00000564793 IRX2Q9BZI1 471 aaPredicted RBP7.86□□□□□ -1.15
CFDP1-204ENST00000564793 GRIP2Q9C0E4 1043 aa7.86□□□□□ -1.15
CFDP1-204ENST00000564793 CFDP1Q9UEE9 299 aaPredicted RBP7.86□□□□□ -1.15
CFDP1-204ENST00000564793 VWDEQ8N2E2 1590 aa7.85□□□□□ -1.15
CFDP1-204ENST00000564793 GTF2E1P29083 439 aaPredicted RBP7.85□□□□□ -1.15
CFDP1-204ENST00000564793 ARID4AP29374 1257 aaPredicted RBP7.85□□□□□ -1.15
CFDP1-204ENST00000564793 SERPINB4P48594 390 aa7.85□□□□□ -1.15
CFDP1-204ENST00000564793 RNF217Q8TC41 542 aa7.85□□□□□ -1.15
CFDP1-204ENST00000564793 ZDHHC1Q8WTX9 485 aa7.85□□□□□ -1.15
CFDP1-204ENST00000564793 VTI1AQ96AJ9 217 aa7.85□□□□□ -1.15
CFDP1-204ENST00000564793 CABP1Q9NZU7 370 aa7.85□□□□□ -1.15
CFDP1-204ENST00000564793 SEPT3Q9UH03 358 aa7.85□□□□□ -1.15
CFDP1-204ENST00000564793 GNEQ9Y223 722 aaKnown RBP7.85□□□□□ -1.15
CFDP1-204ENST00000564793 KDM5AP29375 1690 aaKnown RBP7.85□□□□□ -1.15
CFDP1-204ENST00000564793 DUOX2Q9NRD8 1548 aa7.84□□□□□ -1.15
CFDP1-204ENST00000564793 HNRNPMP52272 730 aaKnown RBP eCLIP7.84□□□□□ -1.15
CFDP1-204ENST00000564793 HSPA2P54652 639 aa7.84□□□□□ -1.15
CFDP1-204ENST00000564793 GNASQ5JWF2 1037 aa7.84□□□□□ -1.15
CFDP1-204ENST00000564793 SH3PXD2AQ5TCZ1 1133 aa7.84□□□□□ -1.15
CFDP1-204ENST00000564793 CCER1Q8TC90 406 aaPredicted RBP7.84□□□□□ -1.15
CFDP1-204ENST00000564793 RHBDD1Q8TEB9 315 aa7.84□□□□□ -1.15
CFDP1-204ENST00000564793 ZFP42Q96MM3 310 aa7.84□□□□□ -1.15
CFDP1-204ENST00000564793 C2orf49Q9BVC5 232 aaPredicted RBP7.84□□□□□ -1.15
CFDP1-204ENST00000564793 AAASQ9NRG9 546 aa7.84□□□□□ -1.15
CFDP1-204ENST00000564793 PARP3Q9Y6F1 533 aa7.84□□□□□ -1.15
CFDP1-204ENST00000564793 UNC13BO14795 1591 aa7.84□□□□□ -1.15
CFDP1-204ENST00000564793 GCC2Q8IWJ2 1684 aa7.83□□□□□ -1.16
CFDP1-204ENST00000564793 A2ML1A8K2U0 1454 aa7.83□□□□□ -1.16
CFDP1-204ENST00000564793 FIGNL2A6NMB9 653 aa7.83□□□□□ -1.16
CFDP1-204ENST00000564793 TTLL8A6PVC2 850 aa7.83□□□□□ -1.16
CFDP1-204ENST00000564793 EML1O00423 815 aa7.83□□□□□ -1.16
CFDP1-204ENST00000564793 PLA2G4AP47712 749 aa7.83□□□□□ -1.16
CFDP1-204ENST00000564793 CEBPAP49715 358 aaPredicted RBP7.83□□□□□ -1.16
CFDP1-204ENST00000564793 C4orf17Q53FE4 359 aa7.83□□□□□ -1.16
CFDP1-204ENST00000564793 PRICKLE2Q7Z3G6 844 aa7.83□□□□□ -1.16
CFDP1-204ENST00000564793 NIFKQ9BYG3 293 aaKnown RBP7.83□□□□□ -1.16
CFDP1-204ENST00000564793 GZF1Q9H116 711 aaPredicted RBP7.83□□□□□ -1.16
CFDP1-204ENST00000564793 PODXL2Q9NZ53 605 aa7.83□□□□□ -1.16
CFDP1-204ENST00000564793 DACH1Q9UI36 760 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms