RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 CLASRPQ8N2M8 674 aaKnown RBP19.14■□□□□ 0.65
COMMD4-210ENST00000564587 DDRGK1Q96HY6 314 aa19.14■□□□□ 0.65
COMMD4-210ENST00000564587 ARXQ96QS3 562 aa19.14■□□□□ 0.65
COMMD4-210ENST00000564587 SALL3Q9BXA9 1300 aa19.14■□□□□ 0.65
COMMD4-210ENST00000564587 ANKRD36CQ5JPF3 1778 aa19.14■□□□□ 0.65
COMMD4-210ENST00000564587 ITPK1Q13572 414 aa19.13■□□□□ 0.65
COMMD4-210ENST00000564587 RC3H1Q5TC82 1133 aaKnown RBP19.13■□□□□ 0.65
COMMD4-210ENST00000564587 CASC1Q6TDU7 716 aa19.13■□□□□ 0.65
COMMD4-210ENST00000564587 ZBTB38Q8NAP3 1195 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-210ENST00000564587 PLA2G12BQ9BX93 195 aa19.13■□□□□ 0.65
COMMD4-210ENST00000564587 CNTNAP4Q9C0A0 1308 aa19.13■□□□□ 0.65
COMMD4-210ENST00000564587 COL5A3P25940 1745 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-210ENST00000564587 BTAF1O14981 1849 aa19.12■□□□□ 0.65
COMMD4-210ENST00000564587 CDHR2Q9BYE9 1310 aa19.12■□□□□ 0.65
COMMD4-210ENST00000564587 HSP90B1P14625 803 aaKnown RBP19.11■□□□□ 0.65
COMMD4-210ENST00000564587 FOXO4P98177 505 aa19.11■□□□□ 0.65
COMMD4-210ENST00000564587 EPHA10Q5JZY3 1008 aa19.11■□□□□ 0.65
COMMD4-210ENST00000564587 OTUD7AQ8TE49 926 aaPredicted RBP19.11■□□□□ 0.65
COMMD4-210ENST00000564587 GPATCH3Q96I76 525 aa19.11■□□□□ 0.65
COMMD4-210ENST00000564587 ZNF652Q9Y2D9 606 aa19.11■□□□□ 0.65
COMMD4-210ENST00000564587 NUP98P52948 1817 aa19.11■□□□□ 0.65
COMMD4-210ENST00000564587 TTC41PQ6P2S7 1318 aa19.1■□□□□ 0.65
COMMD4-210ENST00000564587 USP42Q9H9J4 1324 aaKnown RBP19.1■□□□□ 0.65
COMMD4-210ENST00000564587 SBF2Q86WG5 1849 aa19.1■□□□□ 0.65
COMMD4-210ENST00000564587 GSPT1P15170 499 aaKnown RBP19.1■□□□□ 0.65
COMMD4-210ENST00000564587 RBM6P78332 1123 aaKnown RBP19.1■□□□□ 0.65
COMMD4-210ENST00000564587 FAM196AQ6ZSG2 479 aa19.1■□□□□ 0.65
COMMD4-210ENST00000564587 NLRP10Q86W26 655 aa19.1■□□□□ 0.65
COMMD4-210ENST00000564587 AK7Q96M32 723 aa19.1■□□□□ 0.65
COMMD4-210ENST00000564587 IPO9Q96P70 1041 aaKnown RBP19.1■□□□□ 0.65
COMMD4-210ENST00000564587 BCL11BQ9C0K0 894 aaPredicted RBP19.1■□□□□ 0.65
COMMD4-210ENST00000564587 FBXO3Q9UK99 471 aa19.1■□□□□ 0.65
COMMD4-210ENST00000564587 RFX5P48382 616 aaPredicted RBP19.09■□□□□ 0.65
COMMD4-210ENST00000564587 HLFQ16534 295 aa19.09■□□□□ 0.65
COMMD4-210ENST00000564587 PARP10Q53GL7 1025 aa19.09■□□□□ 0.65
COMMD4-210ENST00000564587 LMBR1LQ6UX01 489 aa19.09■□□□□ 0.65
COMMD4-210ENST00000564587 ZNF34Q8IZ26 560 aa19.09■□□□□ 0.65
COMMD4-210ENST00000564587 IL1RAPL2Q9NP60 686 aa19.09■□□□□ 0.65
COMMD4-210ENST00000564587 ERC2O15083 957 aa19.08■□□□□ 0.64
COMMD4-210ENST00000564587 CLEC4GQ6UXB4 293 aa19.08■□□□□ 0.64
COMMD4-210ENST00000564587 TBC1D2BQ9UPU7 963 aa19.08■□□□□ 0.64
COMMD4-210ENST00000564587 PA2G4Q9UQ80 394 aaKnown RBP19.08■□□□□ 0.64
COMMD4-210ENST00000564587 MYH14Q7Z406 1995 aaKnown RBP19.08■□□□□ 0.64
COMMD4-210ENST00000564587 IFIT2P09913 472 aaKnown RBP19.07■□□□□ 0.64
COMMD4-210ENST00000564587 SDSP20132 328 aa19.07■□□□□ 0.64
COMMD4-210ENST00000564587 PTPN12Q05209 780 aaKnown RBP19.07■□□□□ 0.64
COMMD4-210ENST00000564587 BCL11AQ9H165 835 aa19.07■□□□□ 0.64
COMMD4-210ENST00000564587 LY75O60449 1722 aa19.06■□□□□ 0.64
COMMD4-210ENST00000564587 CAMTA2O94983 1202 aa19.06■□□□□ 0.64
COMMD4-210ENST00000564587 SEC24BO95487 1268 aa19.06■□□□□ 0.64
COMMD4-210ENST00000564587 TBC1D9Q6ZT07 1266 aa19.06■□□□□ 0.64
COMMD4-210ENST00000564587 KRT27Q7Z3Y8 459 aa19.06■□□□□ 0.64
COMMD4-210ENST00000564587 LINC00116Q8NCU8 138 aa19.06■□□□□ 0.64
COMMD4-210ENST00000564587 JARID2Q92833 1246 aaPredicted RBP19.06■□□□□ 0.64
COMMD4-210ENST00000564587 TBC1D32Q96NH3 1257 aa19.06■□□□□ 0.64
COMMD4-210ENST00000564587 CCNL1Q9UK58 526 aaPredicted RBP19.06■□□□□ 0.64
COMMD4-210ENST00000564587 RPS6KA4O75676 772 aa19.05■□□□□ 0.64
COMMD4-210ENST00000564587 GLRX3O76003 335 aaKnown RBP19.05■□□□□ 0.64
COMMD4-210ENST00000564587 CIAO1O76071 339 aa19.05■□□□□ 0.64
COMMD4-210ENST00000564587 SASH1O94885 1247 aa19.05■□□□□ 0.64
COMMD4-210ENST00000564587 TRMT112Q9UI30 125 aaKnown RBP19.05■□□□□ 0.64
COMMD4-210ENST00000564587 CHMP3Q9Y3E7 222 aa19.05■□□□□ 0.64
COMMD4-210ENST00000564587 CSF1RP07333 972 aa19.04■□□□□ 0.64
COMMD4-210ENST00000564587 IL15P40933 162 aaPredicted RBP19.04■□□□□ 0.64
COMMD4-210ENST00000564587 MFAP1P55081 439 aaKnown RBP19.04■□□□□ 0.64
COMMD4-210ENST00000564587 CCDC57Q2TAC2 916 aa19.04■□□□□ 0.64
COMMD4-210ENST00000564587 NUTM1Q86Y26 1132 aa19.04■□□□□ 0.64
COMMD4-210ENST00000564587 ECHDC1Q9NTX5 307 aa19.04■□□□□ 0.64
COMMD4-210ENST00000564587 GPTP24298 496 aa19.03■□□□□ 0.64
COMMD4-210ENST00000564587 AACSQ86V21 672 aa19.03■□□□□ 0.64
COMMD4-210ENST00000564587 FAM89AQ96GI7 184 aa19.03■□□□□ 0.64
COMMD4-210ENST00000564587 C22orf23Q9BZE7 217 aa19.03■□□□□ 0.64
COMMD4-210ENST00000564587 GPR108Q9NPR9 543 aa19.03■□□□□ 0.64
COMMD4-210ENST00000564587 PDE8AO60658 829 aa19.02■□□□□ 0.64
COMMD4-210ENST00000564587 UTP14AQ9BVJ6 771 aaKnown RBP19.02■□□□□ 0.64
COMMD4-210ENST00000564587 SIL1Q9H173 461 aa19.02■□□□□ 0.64
COMMD4-210ENST00000564587 SH3TC1Q8TE82 1336 aa19.01■□□□□ 0.63
COMMD4-210ENST00000564587 BCORQ6W2J9 1755 aa19.01■□□□□ 0.63
COMMD4-210ENST00000564587 TRIM6-TRIM34B2RNG4 842 aa19.01■□□□□ 0.63
COMMD4-210ENST00000564587 EYA2O00167 538 aa19.01■□□□□ 0.63
COMMD4-210ENST00000564587 IRS4O14654 1257 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-210ENST00000564587 IFIT5Q13325 482 aaKnown RBP19.01■□□□□ 0.63
COMMD4-210ENST00000564587 RTL5Q5HYW3 569 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-210ENST00000564587 SLC27A3Q5K4L6 730 aa19.01■□□□□ 0.63
COMMD4-210ENST00000564587 CNTROBQ8N137 903 aa19.01■□□□□ 0.63
COMMD4-210ENST00000564587 PI4K2BQ8TCG2 481 aa19.01■□□□□ 0.63
COMMD4-210ENST00000564587 RTCBQ9Y3I0 505 aaKnown RBP19.01■□□□□ 0.63
COMMD4-210ENST00000564587 TUBGCP6Q96RT7 1819 aa19.01■□□□□ 0.63
COMMD4-210ENST00000564587 MYH3P11055 1940 aa19■□□□□ 0.63
COMMD4-210ENST00000564587 REC8O95072 547 aa19■□□□□ 0.63
COMMD4-210ENST00000564587 CTSWP56202 376 aa19■□□□□ 0.63
COMMD4-210ENST00000564587 FAM182BQ5T319 152 aa19■□□□□ 0.63
COMMD4-210ENST00000564587 PTF1AQ7RTS3 328 aa19■□□□□ 0.63
COMMD4-210ENST00000564587 TAF1LQ8IZX4 1826 aa19■□□□□ 0.63
COMMD4-210ENST00000564587 UBN2Q6ZU65 1347 aa19■□□□□ 0.63
COMMD4-210ENST00000564587 RBM25P49756 843 aaKnown RBP18.99■□□□□ 0.63
COMMD4-210ENST00000564587 TAF7LQ5H9L4 462 aa18.99■□□□□ 0.63
COMMD4-210ENST00000564587 KLHDC4Q8TBB5 520 aa18.99■□□□□ 0.63
COMMD4-210ENST00000564587 EAF2Q96CJ1 260 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-210ENST00000564587 DAXXQ9UER7 740 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms