RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 CC2D2BQ6DHV5 1058 aa24.49■■□□□ 1.51
E4F1-203ENST00000563643 FMNL2Q96PY5 1086 aa24.49■■□□□ 1.51
E4F1-203ENST00000563643 HSPA5P11021 654 aaKnown RBP24.48■■□□□ 1.51
E4F1-203ENST00000563643 TEFQ10587 303 aa24.48■■□□□ 1.51
E4F1-203ENST00000563643 NIP7Q9Y221 180 aaKnown RBP eCLIP24.48■■□□□ 1.51
E4F1-203ENST00000563643 FAM177BA6PVY3 158 aa24.47■■□□□ 1.51
E4F1-203ENST00000563643 PIP4K2AP48426 406 aaPredicted RBP24.47■■□□□ 1.51
E4F1-203ENST00000563643 SAGE1Q9NXZ1 904 aa24.47■■□□□ 1.51
E4F1-203ENST00000563643 CRY2Q49AN0 593 aa24.45■■□□□ 1.5
E4F1-203ENST00000563643 NIM1KQ8IY84 436 aa24.45■■□□□ 1.5
E4F1-203ENST00000563643 PGAP2Q9UHJ9 254 aa24.45■■□□□ 1.5
E4F1-203ENST00000563643 HUNKP57058 714 aa24.44■■□□□ 1.5
E4F1-203ENST00000563643 GCC1Q96CN9 775 aa24.44■■□□□ 1.5
E4F1-203ENST00000563643 PANK3Q9H999 370 aa24.44■■□□□ 1.5
E4F1-203ENST00000563643 GTF2E1P29083 439 aaPredicted RBP24.42■■□□□ 1.5
E4F1-203ENST00000563643 GRIPAP1Q4V328 841 aa24.42■■□□□ 1.5
E4F1-203ENST00000563643 NBPF15Q8N660 670 aa24.42■■□□□ 1.5
E4F1-203ENST00000563643 IL17REQ8NFR9 667 aa24.42■■□□□ 1.5
E4F1-203ENST00000563643 CDC37L1Q7L3B6 337 aa24.41■■□□□ 1.5
E4F1-203ENST00000563643 CTU1Q7Z7A3 348 aaKnown RBP24.41■■□□□ 1.5
E4F1-203ENST00000563643 SLC51AQ86UW1 340 aa24.41■■□□□ 1.5
E4F1-203ENST00000563643 ZC3H15Q8WU90 426 aaKnown RBP24.41■■□□□ 1.5
E4F1-203ENST00000563643 USP16Q9Y5T5 823 aa24.41■■□□□ 1.5
E4F1-203ENST00000563643 ABCC12Q96J65 1359 aa24.41■■□□□ 1.5
E4F1-203ENST00000563643 NPC1L1Q9UHC9 1359 aa24.41■■□□□ 1.5
E4F1-203ENST00000563643 SIPA1L3O60292 1781 aaPredicted RBP24.4■■□□□ 1.5
E4F1-203ENST00000563643 FAM155AB1AL88 458 aaPredicted RBP24.4■■□□□ 1.5
E4F1-203ENST00000563643 RGL2O15211 777 aa24.4■■□□□ 1.5
E4F1-203ENST00000563643 PPIP5K2O43314 1243 aa24.4■■□□□ 1.5
E4F1-203ENST00000563643 GMPSP49915 693 aaPredicted RBP24.4■■□□□ 1.5
E4F1-203ENST00000563643 TRPA1O75762 1119 aa24.39■■□□□ 1.49
E4F1-203ENST00000563643 RNF186Q9NXI6 227 aa24.39■■□□□ 1.49
E4F1-203ENST00000563643 HIRAP54198 1017 aaPredicted RBP24.38■■□□□ 1.49
E4F1-203ENST00000563643 CXCL9Q07325 125 aa24.38■■□□□ 1.49
E4F1-203ENST00000563643 AOC3Q16853 763 aa24.38■■□□□ 1.49
E4F1-203ENST00000563643 RGMBQ6NW40 437 aa24.38■■□□□ 1.49
E4F1-203ENST00000563643 RPGRQ92834 1020 aaKnown RBP24.38■■□□□ 1.49
E4F1-203ENST00000563643 HPS5Q9UPZ3 1129 aa24.38■■□□□ 1.49
E4F1-203ENST00000563643 KCNQ3O43525 872 aa24.37■■□□□ 1.49
E4F1-203ENST00000563643 KIF23Q02241 960 aaPredicted RBP24.37■■□□□ 1.49
E4F1-203ENST00000563643 CDHR2Q9BYE9 1310 aa24.36■■□□□ 1.49
E4F1-203ENST00000563643 GNAT3A8MTJ3 354 aa24.36■■□□□ 1.49
E4F1-203ENST00000563643 HOXA10P31260 410 aaPredicted RBP24.36■■□□□ 1.49
E4F1-203ENST00000563643 TRPM4Q8TD43 1214 aa24.36■■□□□ 1.49
E4F1-203ENST00000563643 PRAMEF22A3QJZ6 481 aa24.35■■□□□ 1.49
E4F1-203ENST00000563643 TCERG1O14776 1098 aaKnown RBP24.35■■□□□ 1.49
E4F1-203ENST00000563643 PPEF1O14829 653 aaPredicted RBP24.35■■□□□ 1.49
E4F1-203ENST00000563643 HLFQ16534 295 aa24.35■■□□□ 1.49
E4F1-203ENST00000563643 HABP4Q5JVS0 413 aaKnown RBP24.35■■□□□ 1.49
E4F1-203ENST00000563643 NUTM1Q86Y26 1132 aa24.35■■□□□ 1.49
E4F1-203ENST00000563643 ZNRF3Q9ULT6 936 aa24.35■■□□□ 1.49
E4F1-203ENST00000563643 RIC1Q4ADV7 1423 aa24.35■■□□□ 1.49
E4F1-203ENST00000563643 BTBD11A6QL63 1104 aa24.34■■□□□ 1.49
E4F1-203ENST00000563643 USP48Q86UV5 1035 aa24.34■■□□□ 1.49
E4F1-203ENST00000563643 CCDC102AQ96A19 550 aa24.34■■□□□ 1.49
E4F1-203ENST00000563643 KIF7Q2M1P5 1343 aa24.34■■□□□ 1.49
E4F1-203ENST00000563643 DLK2Q6UY11 383 aa24.33■■□□□ 1.49
E4F1-203ENST00000563643 NYXQ9GZU5 481 aa24.33■■□□□ 1.49
E4F1-203ENST00000563643 CEMIPQ8WUJ3 1361 aa24.32■■□□□ 1.48
E4F1-203ENST00000563643 NBPF26B4DH59 902 aa24.32■■□□□ 1.48
E4F1-203ENST00000563643 NBPF10Q6P3W6 841 aaKnown RBP24.32■■□□□ 1.48
E4F1-203ENST00000563643 BCL2L13Q9BXK5 485 aa24.32■■□□□ 1.48
E4F1-203ENST00000563643 VPS33BQ9H267 617 aa24.32■■□□□ 1.48
E4F1-203ENST00000563643 ZNF157P51786 506 aaPredicted RBP24.31■■□□□ 1.48
E4F1-203ENST00000563643 GAS2L2Q8NHY3 880 aa24.31■■□□□ 1.48
E4F1-203ENST00000563643 RBM17Q96I25 401 aaKnown RBP24.3■■□□□ 1.48
E4F1-203ENST00000563643 CRAMP1Q96RY5 1269 aa24.3■■□□□ 1.48
E4F1-203ENST00000563643 GBA2Q9HCG7 927 aaPredicted RBP24.3■■□□□ 1.48
E4F1-203ENST00000563643 MKI67P46013 3256 aaKnown RBP24.3■■□□□ 1.48
E4F1-203ENST00000563643 DIAPH1O60610 1272 aaKnown RBP24.29■■□□□ 1.48
E4F1-203ENST00000563643 SNRPA1P09661 255 aaKnown RBP24.29■■□□□ 1.48
E4F1-203ENST00000563643 PKN2Q16513 984 aaKnown RBP24.29■■□□□ 1.48
E4F1-203ENST00000563643 SHTN1A0MZ66 631 aa24.28■■□□□ 1.48
E4F1-203ENST00000563643 C2orf69Q8N8R5 385 aa24.28■■□□□ 1.48
E4F1-203ENST00000563643 CSRNP1Q96S65 589 aa24.28■■□□□ 1.48
E4F1-203ENST00000563643 RAD17O75943 681 aa24.27■■□□□ 1.48
E4F1-203ENST00000563643 SLC10A3P09131 477 aa24.27■■□□□ 1.48
E4F1-203ENST00000563643 TMX4Q9H1E5 349 aaPredicted RBP24.27■■□□□ 1.48
E4F1-203ENST00000563643 CNOT7Q9UIV1 285 aaKnown RBP24.27■■□□□ 1.48
E4F1-203ENST00000563643 KNSTRNQ9Y448 316 aa24.27■■□□□ 1.48
E4F1-203ENST00000563643 TNIP1Q15025 636 aa24.26■■□□□ 1.47
E4F1-203ENST00000563643 KRT26Q7Z3Y9 468 aa24.26■■□□□ 1.47
E4F1-203ENST00000563643 SUPT20HQ8NEM7 779 aa24.26■■□□□ 1.47
E4F1-203ENST00000563643 MICALL2Q8IY33 904 aa24.25■■□□□ 1.47
E4F1-203ENST00000563643 RTFDC1Q9BY42 306 aaPredicted RBP24.25■■□□□ 1.47
E4F1-203ENST00000563643 ATP6V0A2Q9Y487 856 aa24.25■■□□□ 1.47
E4F1-203ENST00000563643 AKAP11Q9UKA4 1901 aa24.25■■□□□ 1.47
E4F1-203ENST00000563643 H7C1D1 291 aa24.24■■□□□ 1.47
E4F1-203ENST00000563643 IBTKQ9P2D0 1353 aaPredicted RBP24.24■■□□□ 1.47
E4F1-203ENST00000563643 HDAC9Q9UKV0 1011 aa24.23■■□□□ 1.47
E4F1-203ENST00000563643 ADM5C9JUS6 153 aa24.22■■□□□ 1.47
E4F1-203ENST00000563643 KIAA2012Q0VF49 1180 aa24.22■■□□□ 1.47
E4F1-203ENST00000563643 C3orf67Q6ZVT6 689 aa24.22■■□□□ 1.47
E4F1-203ENST00000563643 UBN2Q6ZU65 1347 aa24.21■■□□□ 1.47
E4F1-203ENST00000563643 AMER1Q5JTC6 1135 aaPredicted RBP24.21■■□□□ 1.47
E4F1-203ENST00000563643 GPTP24298 496 aa24.2■■□□□ 1.46
E4F1-203ENST00000563643 FXR1P51114 621 aaKnown RBP eCLIP24.2■■□□□ 1.46
E4F1-203ENST00000563643 DPP8Q6V1X1 898 aaPredicted RBP24.2■■□□□ 1.46
E4F1-203ENST00000563643 SAMD7Q7Z3H4 446 aa24.2■■□□□ 1.46
E4F1-203ENST00000563643 REM2Q8IYK8 340 aaPredicted RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms