RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 H3BQV1 296 aa15.02■□□□□ -0
CCDC187-201ENST00000563590 IRX5P78411 483 aaPredicted RBP15.02■□□□□ -0
CCDC187-201ENST00000563590 ARID5BQ14865 1188 aa15.02■□□□□ -0
CCDC187-201ENST00000563590 IFFO2Q5TF58 517 aa15.02■□□□□ -0
CCDC187-201ENST00000563590 AATKQ6ZMQ8 1374 aa15.02□□□□□ -0.01
CCDC187-201ENST00000563590 LIG1P18858 919 aa15.02□□□□□ -0.01
CCDC187-201ENST00000563590 PDRG1Q9NUG6 133 aa15.02□□□□□ -0.01
CCDC187-201ENST00000563590 SSH2Q76I76 1423 aa15.02□□□□□ -0.01
CCDC187-201ENST00000563590 RUFY3Q7L099 469 aa15.01□□□□□ -0.01
CCDC187-201ENST00000563590 RASEFQ8IZ41 740 aa15.01□□□□□ -0.01
CCDC187-201ENST00000563590 CALCOCO1Q9P1Z2 691 aa15.01□□□□□ -0.01
CCDC187-201ENST00000563590 SNX14Q9Y5W7 946 aa15.01□□□□□ -0.01
CCDC187-201ENST00000563590 KAT6BQ8WYB5 2073 aa15.01□□□□□ -0.01
CCDC187-201ENST00000563590 SKILP12757 684 aa15.01□□□□□ -0.01
CCDC187-201ENST00000563590 TAF7Q15545 349 aaPredicted RBP15.01□□□□□ -0.01
CCDC187-201ENST00000563590 PAXIP1Q6ZW49 1069 aaPredicted RBP15.01□□□□□ -0.01
CCDC187-201ENST00000563590 CTNNA3Q9UI47 895 aa15.01□□□□□ -0.01
CCDC187-201ENST00000563590 LARGE1O95461 756 aa15.01□□□□□ -0.01
CCDC187-201ENST00000563590 CBX8Q9HC52 389 aa15.01□□□□□ -0.01
CCDC187-201ENST00000563590 PLEKHG1Q9ULL1 1385 aa15.01□□□□□ -0.01
CCDC187-201ENST00000563590 ATP8B2P98198 1209 aa15□□□□□ -0.01
CCDC187-201ENST00000563590 GABPB1Q06547 395 aaPredicted RBP15□□□□□ -0.01
CCDC187-201ENST00000563590 DDX11Q96FC9 970 aa15□□□□□ -0.01
CCDC187-201ENST00000563590 STAP2Q9UGK3 403 aa15□□□□□ -0.01
CCDC187-201ENST00000563590 USP16Q9Y5T5 823 aa15□□□□□ -0.01
CCDC187-201ENST00000563590 MYO5BQ9ULV0 1848 aa15□□□□□ -0.01
CCDC187-201ENST00000563590 SMC2O95347 1197 aa15□□□□□ -0.01
CCDC187-201ENST00000563590 ZSCAN25Q6NSZ9 544 aa15□□□□□ -0.01
CCDC187-201ENST00000563590 MNS1Q8NEH6 495 aa15□□□□□ -0.01
CCDC187-201ENST00000563590 PAXBP1Q9Y5B6 917 aa15□□□□□ -0.01
CCDC187-201ENST00000563590 TMEM131LA2VDJ0 1609 aa14.99□□□□□ -0.01
CCDC187-201ENST00000563590 ZNF397Q8NF99 534 aaPredicted RBP14.99□□□□□ -0.01
CCDC187-201ENST00000563590 ERCC4Q92889 916 aaPredicted RBP14.99□□□□□ -0.01
CCDC187-201ENST00000563590 TTC14Q96N46 770 aa14.99□□□□□ -0.01
CCDC187-201ENST00000563590 CPS1P31327 1500 aa14.99□□□□□ -0.01
CCDC187-201ENST00000563590 NRDCO43847 1150 aa14.99□□□□□ -0.01
CCDC187-201ENST00000563590 GNAI3P08754 354 aa14.99□□□□□ -0.01
CCDC187-201ENST00000563590 ZKSCAN1P17029 563 aaPredicted RBP14.99□□□□□ -0.01
CCDC187-201ENST00000563590 TEX35Q5T0J7 233 aa14.99□□□□□ -0.01
CCDC187-201ENST00000563590 KIF18AQ8NI77 898 aa14.99□□□□□ -0.01
CCDC187-201ENST00000563590 CACTINQ8WUQ7 758 aaKnown RBP14.99□□□□□ -0.01
CCDC187-201ENST00000563590 ANKRD7Q92527 254 aa14.99□□□□□ -0.01
CCDC187-201ENST00000563590 EYA1Q99502 592 aa14.99□□□□□ -0.01
CCDC187-201ENST00000563590 FLIIQ13045 1269 aa14.99□□□□□ -0.01
CCDC187-201ENST00000563590 TERF2Q15554 542 aa14.99□□□□□ -0.01
CCDC187-201ENST00000563590 ZNF530Q6P9A1 599 aaPredicted RBP14.99□□□□□ -0.01
CCDC187-201ENST00000563590 PA2G4Q9UQ80 394 aaKnown RBP14.99□□□□□ -0.01
CCDC187-201ENST00000563590 RAD50Q92878 1312 aa14.98□□□□□ -0.01
CCDC187-201ENST00000563590 SLC39A6Q13433 755 aa14.98□□□□□ -0.01
CCDC187-201ENST00000563590 IL17RAQ96F46 866 aa14.98□□□□□ -0.01
CCDC187-201ENST00000563590 CYP46A1Q9Y6A2 500 aa14.98□□□□□ -0.01
CCDC187-201ENST00000563590 MAP3K19Q56UN5 1328 aa14.98□□□□□ -0.01
CCDC187-201ENST00000563590 KCNQ3O43525 872 aa14.97□□□□□ -0.01
CCDC187-201ENST00000563590 NEK11Q8NG66 645 aa14.97□□□□□ -0.01
CCDC187-201ENST00000563590 DDX41Q9UJV9 622 aaKnown RBP14.97□□□□□ -0.01
CCDC187-201ENST00000563590 NDUFB9Q9Y6M9 179 aa14.97□□□□□ -0.01
CCDC187-201ENST00000563590 SGSM2O43147 1006 aa14.97□□□□□ -0.01
CCDC187-201ENST00000563590 STK11IPQ8N1F8 1099 aa14.97□□□□□ -0.01
CCDC187-201ENST00000563590 CCDC8Q9H0W5 538 aaPredicted RBP14.97□□□□□ -0.01
CCDC187-201ENST00000563590 MTMR6Q9Y217 621 aa14.97□□□□□ -0.01
CCDC187-201ENST00000563590 CRB1P82279 1406 aa14.97□□□□□ -0.01
CCDC187-201ENST00000563590 USP27XA6NNY8 438 aa14.97□□□□□ -0.01
CCDC187-201ENST00000563590 ERCC6LQ2NKX8 1250 aa14.97□□□□□ -0.01
CCDC187-201ENST00000563590 PI4KAP2A4QPH2 592 aa14.96□□□□□ -0.01
CCDC187-201ENST00000563590 KMT5BQ4FZB7 885 aa14.96□□□□□ -0.01
CCDC187-201ENST00000563590 C1orf141Q5JVX7 400 aa14.96□□□□□ -0.01
CCDC187-201ENST00000563590 C10orf67Q8IYJ2 551 aa14.96□□□□□ -0.01
CCDC187-201ENST00000563590 PI4KAP1Q8N8J0 262 aa14.96□□□□□ -0.01
CCDC187-201ENST00000563590 CABLES1Q8TDN4 633 aa14.96□□□□□ -0.01
CCDC187-201ENST00000563590 DNAJC2Q99543 621 aaKnown RBP14.96□□□□□ -0.01
CCDC187-201ENST00000563590 SETD1BQ9UPS6 1966 aaKnown RBP14.96□□□□□ -0.01
CCDC187-201ENST00000563590 CTIFO43310 598 aaKnown RBP14.96□□□□□ -0.01
CCDC187-201ENST00000563590 ZNF75DP51815 510 aa14.96□□□□□ -0.01
CCDC187-201ENST00000563590 FBXO38Q6PIJ6 1188 aa14.96□□□□□ -0.01
CCDC187-201ENST00000563590 KLHDC4Q8TBB5 520 aa14.96□□□□□ -0.01
CCDC187-201ENST00000563590 LSG1Q9H089 658 aaKnown RBP14.96□□□□□ -0.01
CCDC187-201ENST00000563590 SLFN14P0C7P3 912 aa14.96□□□□□ -0.02
CCDC187-201ENST00000563590 CCDC30Q5VVM6 783 aa14.96□□□□□ -0.02
CCDC187-201ENST00000563590 CNTROBQ8N137 903 aa14.96□□□□□ -0.02
CCDC187-201ENST00000563590 IPO4Q8TEX9 1081 aaKnown RBP14.96□□□□□ -0.02
CCDC187-201ENST00000563590 IFIT2P09913 472 aaKnown RBP14.95□□□□□ -0.02
CCDC187-201ENST00000563590 TTC6Q86TZ1 520 aa14.95□□□□□ -0.02
CCDC187-201ENST00000563590 LGR6Q9HBX8 967 aa14.95□□□□□ -0.02
CCDC187-201ENST00000563590 CCDC69A6NI79 296 aa14.95□□□□□ -0.02
CCDC187-201ENST00000563590 RAB11FIP3O75154 756 aa14.95□□□□□ -0.02
CCDC187-201ENST00000563590 SYT10Q6XYQ8 523 aa14.95□□□□□ -0.02
CCDC187-201ENST00000563590 KRT28Q7Z3Y7 464 aa14.95□□□□□ -0.02
CCDC187-201ENST00000563590 UBXN4Q92575 508 aa14.95□□□□□ -0.02
CCDC187-201ENST00000563590 CCDC34Q96HJ3 373 aa14.95□□□□□ -0.02
CCDC187-201ENST00000563590 SDF4Q9BRK5 362 aa14.95□□□□□ -0.02
CCDC187-201ENST00000563590 MRVI1Q9Y6F6 885 aa14.95□□□□□ -0.02
CCDC187-201ENST00000563590 ARHGAP29Q52LW3 1261 aa14.94□□□□□ -0.02
CCDC187-201ENST00000563590 CDC37L1Q7L3B6 337 aa14.94□□□□□ -0.02
CCDC187-201ENST00000563590 NEUROD6Q96NK8 337 aa14.94□□□□□ -0.02
CCDC187-201ENST00000563590 SPATA31D1Q6ZQQ2 1576 aa14.94□□□□□ -0.02
CCDC187-201ENST00000563590 SLU7O95391 586 aaKnown RBP14.94□□□□□ -0.02
CCDC187-201ENST00000563590 ISM2Q6H9L7 571 aa14.94□□□□□ -0.02
CCDC187-201ENST00000563590 PPP1R42Q7Z4L9 355 aa14.94□□□□□ -0.02
CCDC187-201ENST00000563590 SOS1Q07889 1333 aaPredicted RBP14.94□□□□□ -0.02
CCDC187-201ENST00000563590 URI1O94763 535 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms