RNA–Protein interactions for RNA: ENST00000563522.5

PDXDC1-208, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-208ENST00000563522 TAOK3Q9H2K8 898 aa10.97□□□□□ -0.65
PDXDC1-208ENST00000563522 ZNF330Q9Y3S2 320 aaPredicted RBP10.97□□□□□ -0.65
PDXDC1-208ENST00000563522 TIAM2Q8IVF5 1701 aa10.96□□□□□ -0.65
PDXDC1-208ENST00000563522 BTBD11A6QL63 1104 aa10.96□□□□□ -0.65
PDXDC1-208ENST00000563522 PRPF40BQ6NWY9 871 aaKnown RBP10.96□□□□□ -0.65
PDXDC1-208ENST00000563522 DZIP3Q86Y13 1208 aaKnown RBP10.96□□□□□ -0.65
PDXDC1-208ENST00000563522 TNS4Q8IZW8 715 aa10.96□□□□□ -0.65
PDXDC1-208ENST00000563522 OTUD5Q96G74 571 aa10.96□□□□□ -0.65
PDXDC1-208ENST00000563522 ZNF652Q9Y2D9 606 aa10.96□□□□□ -0.65
PDXDC1-208ENST00000563522 KLRG2A4D1S0 409 aaPredicted RBP10.95□□□□□ -0.66
PDXDC1-208ENST00000563522 SNRPA1P09661 255 aaKnown RBP10.95□□□□□ -0.66
PDXDC1-208ENST00000563522 PRKAR2BP31323 418 aa10.95□□□□□ -0.66
PDXDC1-208ENST00000563522 ZEB1P37275 1124 aaPredicted RBP10.95□□□□□ -0.66
PDXDC1-208ENST00000563522 RSPH6AQ9H0K4 717 aa10.95□□□□□ -0.66
PDXDC1-208ENST00000563522 NUDCQ9Y266 331 aa10.95□□□□□ -0.66
PDXDC1-208ENST00000563522 ANKRD31Q8N7Z5 1873 aa10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 VIRMAQ69YN4 1812 aaKnown RBP10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 IQCA1LA6NCM1 817 aa10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 HSPA1AP0DMV8 641 aaKnown RBP10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 HSPA1BP0DMV9 641 aaKnown RBP10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 NBPF5PQ86XG9 351 aaPredicted RBP10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 CCDC24Q8N4L8 307 aa10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 C7orf43Q8WVR3 580 aa10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 L3MBTL3Q96JM7 780 aaPredicted RBP10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 ZFP91Q96JP5 570 aaPredicted RBP10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 PHACTR3Q96KR7 559 aa10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 USP16Q9Y5T5 823 aa10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 SIPA1L3O60292 1781 aaPredicted RBP10.94□□□□□ -0.66
PDXDC1-208ENST00000563522 COL11A2P13942 1736 aaPredicted RBP10.93□□□□□ -0.66
PDXDC1-208ENST00000563522 KCNQ3O43525 872 aa10.93□□□□□ -0.66
PDXDC1-208ENST00000563522 HTATSF1O43719 755 aaKnown RBP10.93□□□□□ -0.66
PDXDC1-208ENST00000563522 NPR1P16066 1061 aa10.93□□□□□ -0.66
PDXDC1-208ENST00000563522 CCDC93Q567U6 631 aa10.93□□□□□ -0.66
PDXDC1-208ENST00000563522 RTF1Q92541 710 aaKnown RBP10.93□□□□□ -0.66
PDXDC1-208ENST00000563522 FER1L6Q2WGJ9 1857 aa10.92□□□□□ -0.66
PDXDC1-208ENST00000563522 DDNO94850 711 aaPredicted RBP10.92□□□□□ -0.66
PDXDC1-208ENST00000563522 POTEJP0CG39 1038 aa10.92□□□□□ -0.66
PDXDC1-208ENST00000563522 TPTE2Q6XPS3 522 aa10.92□□□□□ -0.66
PDXDC1-208ENST00000563522 LDHDQ86WU2 507 aa10.92□□□□□ -0.66
PDXDC1-208ENST00000563522 RTKN2Q8IZC4 609 aa10.92□□□□□ -0.66
PDXDC1-208ENST00000563522 BCORQ6W2J9 1755 aa10.91□□□□□ -0.66
PDXDC1-208ENST00000563522 FKBP4Q02790 459 aaKnown RBP eCLIP10.91□□□□□ -0.66
PDXDC1-208ENST00000563522 PASKQ96RG2 1323 aa10.9□□□□□ -0.66
PDXDC1-208ENST00000563522 DICER1Q9UPY3 1922 aaKnown RBP10.9□□□□□ -0.66
PDXDC1-208ENST00000563522 U2AF1L5P0DN76 240 aaPredicted RBP10.9□□□□□ -0.66
PDXDC1-208ENST00000563522 ALDH1B1P30837 517 aa10.9□□□□□ -0.66
PDXDC1-208ENST00000563522 U2AF1Q01081 240 aaKnown RBP eCLIP10.9□□□□□ -0.66
PDXDC1-208ENST00000563522 TAF1DQ9H5J8 278 aaPredicted RBP10.9□□□□□ -0.66
PDXDC1-208ENST00000563522 NIP7Q9Y221 180 aaKnown RBP eCLIP10.9□□□□□ -0.66
PDXDC1-208ENST00000563522 ARFGEF2Q9Y6D5 1785 aa10.9□□□□□ -0.67
PDXDC1-208ENST00000563522 CNTNAP1P78357 1384 aa10.9□□□□□ -0.67
PDXDC1-208ENST00000563522 SLX4Q8IY92 1834 aa10.89□□□□□ -0.67
PDXDC1-208ENST00000563522 PRAMEF22A3QJZ6 481 aa10.89□□□□□ -0.67
PDXDC1-208ENST00000563522 NBPF26B4DH59 902 aa10.89□□□□□ -0.67
PDXDC1-208ENST00000563522 PIP4K2AP48426 406 aaPredicted RBP10.89□□□□□ -0.67
PDXDC1-208ENST00000563522 TAF7Q15545 349 aaPredicted RBP10.89□□□□□ -0.67
PDXDC1-208ENST00000563522 NBPF10Q6P3W6 841 aaKnown RBP10.89□□□□□ -0.67
PDXDC1-208ENST00000563522 MCM10Q7L590 875 aa10.89□□□□□ -0.67
PDXDC1-208ENST00000563522 PNMA8AQ86V59 439 aaPredicted RBP10.89□□□□□ -0.67
PDXDC1-208ENST00000563522 NBPF15Q8N660 670 aa10.89□□□□□ -0.67
PDXDC1-208ENST00000563522 HACL1Q9UJ83 578 aa10.89□□□□□ -0.67
PDXDC1-208ENST00000563522 ERVV-1B6SEH8 477 aa10.88□□□□□ -0.67
PDXDC1-208ENST00000563522 G3V3G9 751 aa10.88□□□□□ -0.67
PDXDC1-208ENST00000563522 PPP2R1AP30153 589 aa10.88□□□□□ -0.67
PDXDC1-208ENST00000563522 CNGB1Q14028 1251 aaPredicted RBP10.88□□□□□ -0.67
PDXDC1-208ENST00000563522 CCDC88AQ3V6T2 1871 aa10.88□□□□□ -0.67
PDXDC1-208ENST00000563522 GRIPAP1Q4V328 841 aa10.88□□□□□ -0.67
PDXDC1-208ENST00000563522 CC2D2BQ6DHV5 1058 aa10.88□□□□□ -0.67
PDXDC1-208ENST00000563522 EFCAB3Q8N7B9 438 aa10.88□□□□□ -0.67
PDXDC1-208ENST00000563522 PNISRQ8TF01 805 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-208ENST00000563522 NYXQ9GZU5 481 aa10.88□□□□□ -0.67
PDXDC1-208ENST00000563522 ZNF277Q9NRM2 450 aaPredicted RBP10.88□□□□□ -0.67
PDXDC1-208ENST00000563522 MKRN1Q9UHC7 482 aaKnown RBP10.88□□□□□ -0.67
PDXDC1-208ENST00000563522 ZNF541Q9H0D2 1346 aa10.87□□□□□ -0.67
PDXDC1-208ENST00000563522 RIC1Q4ADV7 1423 aa10.87□□□□□ -0.67
PDXDC1-208ENST00000563522 TMEM88BA6NKF7 163 aa10.87□□□□□ -0.67
PDXDC1-208ENST00000563522 FZD9O00144 591 aa10.87□□□□□ -0.67
PDXDC1-208ENST00000563522 STK25O00506 426 aa10.87□□□□□ -0.67
PDXDC1-208ENST00000563522 ITGBL1O95965 494 aaPredicted RBP10.87□□□□□ -0.67
PDXDC1-208ENST00000563522 GTF2E1P29083 439 aaPredicted RBP10.87□□□□□ -0.67
PDXDC1-208ENST00000563522 CRY2Q49AN0 593 aa10.87□□□□□ -0.67
PDXDC1-208ENST00000563522 PSMD1Q99460 953 aa10.87□□□□□ -0.67
PDXDC1-208ENST00000563522 PRDM10Q9NQV6 1147 aa10.87□□□□□ -0.67
PDXDC1-208ENST00000563522 STK24Q9Y6E0 443 aa10.87□□□□□ -0.67
PDXDC1-208ENST00000563522 IBTKQ9P2D0 1353 aaPredicted RBP10.87□□□□□ -0.67
PDXDC1-208ENST00000563522 SCN4AP35499 1836 aa10.86□□□□□ -0.67
PDXDC1-208ENST00000563522 EPHX2P34913 555 aa10.86□□□□□ -0.67
PDXDC1-208ENST00000563522 IARSP41252 1262 aaKnown RBP10.86□□□□□ -0.67
PDXDC1-208ENST00000563522 GPC2Q8N158 579 aa10.86□□□□□ -0.67
PDXDC1-208ENST00000563522 PDCD7Q8N8D1 485 aaKnown RBP10.86□□□□□ -0.67
PDXDC1-208ENST00000563522 PCNTO95613 3336 aa10.86□□□□□ -0.67
PDXDC1-208ENST00000563522 NEFMP07197 916 aa10.85□□□□□ -0.67
PDXDC1-208ENST00000563522 HOXA10P31260 410 aaPredicted RBP10.85□□□□□ -0.67
PDXDC1-208ENST00000563522 CTCFP49711 727 aaPredicted RBP10.85□□□□□ -0.67
PDXDC1-208ENST00000563522 DCTN1Q14203 1278 aa10.85□□□□□ -0.67
PDXDC1-208ENST00000563522 HLFQ16534 295 aa10.85□□□□□ -0.67
PDXDC1-208ENST00000563522 EAPPQ56P03 285 aaPredicted RBP10.85□□□□□ -0.67
PDXDC1-208ENST00000563522 SYNE4Q8N205 404 aa10.85□□□□□ -0.67
PDXDC1-208ENST00000563522 JDP2Q8WYK2 163 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms