RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 EIF6P56537 245 aaKnown RBP10.56□□□□□ -0.72
HERPUD1-206ENST00000563343 SOX10P56693 466 aa10.56□□□□□ -0.72
HERPUD1-206ENST00000563343 POLA2Q14181 598 aa10.56□□□□□ -0.72
HERPUD1-206ENST00000563343 CIAPIN1Q6FI81 312 aa10.56□□□□□ -0.72
HERPUD1-206ENST00000563343 CLEC4GQ6UXB4 293 aa10.56□□□□□ -0.72
HERPUD1-206ENST00000563343 NBPF5PQ86XG9 351 aaPredicted RBP10.56□□□□□ -0.72
HERPUD1-206ENST00000563343 TTC5Q8N0Z6 440 aa10.56□□□□□ -0.72
HERPUD1-206ENST00000563343 LAMB2P55268 1798 aa10.55□□□□□ -0.72
HERPUD1-206ENST00000563343 HMOX1P09601 288 aa10.55□□□□□ -0.72
HERPUD1-206ENST00000563343 LMOD1P29536 600 aaPredicted RBP10.55□□□□□ -0.72
HERPUD1-206ENST00000563343 SLC51AQ86UW1 340 aa10.55□□□□□ -0.72
HERPUD1-206ENST00000563343 IL17REQ8NFR9 667 aa10.55□□□□□ -0.72
HERPUD1-206ENST00000563343 JDP2Q8WYK2 163 aa10.55□□□□□ -0.72
HERPUD1-206ENST00000563343 PANK3Q9H999 370 aa10.55□□□□□ -0.72
HERPUD1-206ENST00000563343 PGAP2Q9UHJ9 254 aa10.55□□□□□ -0.72
HERPUD1-206ENST00000563343 CELF2O95319 508 aaKnown RBP10.54□□□□□ -0.72
HERPUD1-206ENST00000563343 ALDH1B1P30837 517 aa10.54□□□□□ -0.72
HERPUD1-206ENST00000563343 PIP4K2AP48426 406 aaPredicted RBP10.54□□□□□ -0.72
HERPUD1-206ENST00000563343 CRY2Q49AN0 593 aa10.54□□□□□ -0.72
HERPUD1-206ENST00000563343 RIC1Q4ADV7 1423 aa10.54□□□□□ -0.72
HERPUD1-206ENST00000563343 MORC1Q86VD1 984 aa10.54□□□□□ -0.72
HERPUD1-206ENST00000563343 ADARB2Q9NS39 739 aaKnown RBP10.54□□□□□ -0.72
HERPUD1-206ENST00000563343 CEMIPQ8WUJ3 1361 aa10.53□□□□□ -0.72
HERPUD1-206ENST00000563343 ABCC12Q96J65 1359 aa10.53□□□□□ -0.72
HERPUD1-206ENST00000563343 RGL2O15211 777 aa10.53□□□□□ -0.72
HERPUD1-206ENST00000563343 KCNQ3O43525 872 aa10.53□□□□□ -0.72
HERPUD1-206ENST00000563343 FMNL2Q96PY5 1086 aa10.53□□□□□ -0.72
HERPUD1-206ENST00000563343 GLIS2Q9BZE0 524 aaPredicted RBP10.53□□□□□ -0.72
HERPUD1-206ENST00000563343 GPRC5DQ9NZD1 345 aa10.53□□□□□ -0.72
HERPUD1-206ENST00000563343 USP16Q9Y5T5 823 aa10.53□□□□□ -0.72
HERPUD1-206ENST00000563343 PRAMEF22A3QJZ6 481 aa10.52□□□□□ -0.73
HERPUD1-206ENST00000563343 FAM155AB1AL88 458 aaPredicted RBP10.52□□□□□ -0.73
HERPUD1-206ENST00000563343 CC2D2BQ6DHV5 1058 aa10.52□□□□□ -0.73
HERPUD1-206ENST00000563343 TPTE2Q6XPS3 522 aa10.52□□□□□ -0.73
HERPUD1-206ENST00000563343 NIP7Q9Y221 180 aaKnown RBP eCLIP10.52□□□□□ -0.73
HERPUD1-206ENST00000563343 COL3A1P02461 1466 aaPredicted RBP10.52□□□□□ -0.73
HERPUD1-206ENST00000563343 ANKRD36CQ5JPF3 1778 aa10.52□□□□□ -0.73
HERPUD1-206ENST00000563343 TAF1P21675 1872 aa10.51□□□□□ -0.73
HERPUD1-206ENST00000563343 NBPF26B4DH59 902 aa10.51□□□□□ -0.73
HERPUD1-206ENST00000563343 HIRAP54198 1017 aaPredicted RBP10.51□□□□□ -0.73
HERPUD1-206ENST00000563343 NOGQ13253 232 aa10.51□□□□□ -0.73
HERPUD1-206ENST00000563343 NBPF10Q6P3W6 841 aaKnown RBP10.51□□□□□ -0.73
HERPUD1-206ENST00000563343 LARGE2Q8N3Y3 721 aa10.51□□□□□ -0.73
HERPUD1-206ENST00000563343 NBPF15Q8N660 670 aa10.51□□□□□ -0.73
HERPUD1-206ENST00000563343 NPC1L1Q9UHC9 1359 aa10.51□□□□□ -0.73
HERPUD1-206ENST00000563343 HOXA10P31260 410 aaPredicted RBP10.5□□□□□ -0.73
HERPUD1-206ENST00000563343 TEFQ10587 303 aa10.5□□□□□ -0.73
HERPUD1-206ENST00000563343 HLFQ16534 295 aa10.5□□□□□ -0.73
HERPUD1-206ENST00000563343 POLR3GLQ9BT43 218 aa10.5□□□□□ -0.73
HERPUD1-206ENST00000563343 SAGE1Q9NXZ1 904 aa10.5□□□□□ -0.73
HERPUD1-206ENST00000563343 ZNF652Q9Y2D9 606 aa10.5□□□□□ -0.73
HERPUD1-206ENST00000563343 KIF7Q2M1P5 1343 aa10.5□□□□□ -0.73
HERPUD1-206ENST00000563343 FAM177BA6PVY3 158 aa10.49□□□□□ -0.73
HERPUD1-206ENST00000563343 GNAT3A8MTJ3 354 aa10.49□□□□□ -0.73
HERPUD1-206ENST00000563343 CXCL9Q07325 125 aa10.49□□□□□ -0.73
HERPUD1-206ENST00000563343 NPM2Q86SE8 214 aaKnown RBP10.49□□□□□ -0.73
HERPUD1-206ENST00000563343 ZC3H15Q8WU90 426 aaKnown RBP10.49□□□□□ -0.73
HERPUD1-206ENST00000563343 CDHR2Q9BYE9 1310 aa10.49□□□□□ -0.73
HERPUD1-206ENST00000563343 LRRC37AA6NMS7 1700 aa10.49□□□□□ -0.73
HERPUD1-206ENST00000563343 KDM3BQ7LBC6 1761 aa10.49□□□□□ -0.73
HERPUD1-206ENST00000563343 RBBP6Q7Z6E9 1792 aaKnown RBP10.49□□□□□ -0.73
HERPUD1-206ENST00000563343 DUOX1Q9NRD9 1551 aa10.48□□□□□ -0.73
HERPUD1-206ENST00000563343 GRIPAP1Q4V328 841 aa10.48□□□□□ -0.73
HERPUD1-206ENST00000563343 AMER1Q5JTC6 1135 aaPredicted RBP10.48□□□□□ -0.73
HERPUD1-206ENST00000563343 DLK2Q6UY11 383 aa10.48□□□□□ -0.73
HERPUD1-206ENST00000563343 NUTM1Q86Y26 1132 aa10.48□□□□□ -0.73
HERPUD1-206ENST00000563343 NIM1KQ8IY84 436 aa10.48□□□□□ -0.73
HERPUD1-206ENST00000563343 TRPM4Q8TD43 1214 aa10.48□□□□□ -0.73
HERPUD1-206ENST00000563343 ZNF408Q9H9D4 720 aa10.48□□□□□ -0.73
HERPUD1-206ENST00000563343 DDX60Q8IY21 1712 aaKnown RBP10.47□□□□□ -0.73
HERPUD1-206ENST00000563343 DLG5Q8TDM6 1919 aa10.47□□□□□ -0.73
HERPUD1-206ENST00000563343 PPIP5K2O43314 1243 aa10.47□□□□□ -0.73
HERPUD1-206ENST00000563343 GMPSP49915 693 aaPredicted RBP10.47□□□□□ -0.73
HERPUD1-206ENST00000563343 HUNKP57058 714 aa10.47□□□□□ -0.73
HERPUD1-206ENST00000563343 KIF23Q02241 960 aaPredicted RBP10.47□□□□□ -0.73
HERPUD1-206ENST00000563343 AOC3Q16853 763 aa10.47□□□□□ -0.73
HERPUD1-206ENST00000563343 CDC37L1Q7L3B6 337 aa10.47□□□□□ -0.73
HERPUD1-206ENST00000563343 CRAMP1Q96RY5 1269 aa10.47□□□□□ -0.73
HERPUD1-206ENST00000563343 RNF186Q9NXI6 227 aa10.47□□□□□ -0.73
HERPUD1-206ENST00000563343 IBTKQ9P2D0 1353 aaPredicted RBP10.47□□□□□ -0.73
HERPUD1-206ENST00000563343 MKI67P46013 3256 aaKnown RBP10.46□□□□□ -0.73
HERPUD1-206ENST00000563343 SHTN1A0MZ66 631 aa10.46□□□□□ -0.73
HERPUD1-206ENST00000563343 BTBD11A6QL63 1104 aa10.46□□□□□ -0.73
HERPUD1-206ENST00000563343 DIAPH1O60610 1272 aaKnown RBP10.46□□□□□ -0.73
HERPUD1-206ENST00000563343 RGMBQ6NW40 437 aa10.46□□□□□ -0.73
HERPUD1-206ENST00000563343 CTU1Q7Z7A3 348 aaKnown RBP10.46□□□□□ -0.73
HERPUD1-206ENST00000563343 GAS2L2Q8NHY3 880 aa10.46□□□□□ -0.73
HERPUD1-206ENST00000563343 RTFDC1Q9BY42 306 aaPredicted RBP10.46□□□□□ -0.73
HERPUD1-206ENST00000563343 VPS33BQ9H267 617 aa10.46□□□□□ -0.73
HERPUD1-206ENST00000563343 ZNRF3Q9ULT6 936 aa10.46□□□□□ -0.73
HERPUD1-206ENST00000563343 HPS5Q9UPZ3 1129 aa10.46□□□□□ -0.73
HERPUD1-206ENST00000563343 PSME4Q14997 1843 aa10.45□□□□□ -0.74
HERPUD1-206ENST00000563343 PAPPA2Q9BXP8 1791 aa10.45□□□□□ -0.74
HERPUD1-206ENST00000563343 UBN2Q6ZU65 1347 aa10.45□□□□□ -0.74
HERPUD1-206ENST00000563343 PPEF1O14829 653 aaPredicted RBP10.45□□□□□ -0.74
HERPUD1-206ENST00000563343 TRPA1O75762 1119 aa10.45□□□□□ -0.74
HERPUD1-206ENST00000563343 SNRPA1P09661 255 aaKnown RBP10.45□□□□□ -0.74
HERPUD1-206ENST00000563343 C3orf67Q6ZVT6 689 aa10.45□□□□□ -0.74
HERPUD1-206ENST00000563343 NYXQ9GZU5 481 aa10.45□□□□□ -0.74
HERPUD1-206ENST00000563343 SCN9AQ15858 1988 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms