RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 PLVAPQ9BX97 442 aa6.22□□□□□ -1.41
SHCBP1-202ENST00000563219 VRTNQ9H8Y1 702 aa6.22□□□□□ -1.41
SHCBP1-202ENST00000563219 KCNH4Q9UQ05 1017 aa6.22□□□□□ -1.41
SHCBP1-202ENST00000563219 FAM196BA6NMK8 535 aa6.21□□□□□ -1.42
SHCBP1-202ENST00000563219 TYRO3Q06418 890 aa6.21□□□□□ -1.42
SHCBP1-202ENST00000563219 DPYDQ12882 1025 aa6.21□□□□□ -1.42
SHCBP1-202ENST00000563219 HIF1AQ16665 826 aa6.21□□□□□ -1.42
SHCBP1-202ENST00000563219 CD163Q86VB7 1156 aa6.21□□□□□ -1.42
SHCBP1-202ENST00000563219 ATG7O95352 703 aa6.2□□□□□ -1.42
SHCBP1-202ENST00000563219 BTLAQ7Z6A9 289 aa6.2□□□□□ -1.42
SHCBP1-202ENST00000563219 ANKMY2Q8IV38 441 aa6.2□□□□□ -1.42
SHCBP1-202ENST00000563219 STARD13Q9Y3M8 1113 aa6.2□□□□□ -1.42
SHCBP1-202ENST00000563219 USP17L15C9J2P7 530 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 USP17L10C9JJH3 530 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 USP17L13C9JLJ4 530 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 USP17L12C9JPN9 530 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 USP17L11C9JVI0 530 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 USP17L21D6R901 530 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 USP17L18D6R9N7 530 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 USP17L22D6RA61 530 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 USP17L17D6RBQ6 530 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 USP17L19D6RCP7 530 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 USP17L20D6RJB6 530 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 M0R082 166 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 IGFBP4P22692 258 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 USP17L24Q0WX57 530 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 COL9A3Q14050 684 aaPredicted RBP6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 ELOAQ14241 798 aaKnown RBP6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 RTN1Q16799 776 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 RAB44Q7Z6P3 723 aaPredicted RBP6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 ZNF417Q8TAU3 575 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 NGLY1Q96IV0 654 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 ARXQ96QS3 562 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 ZNF587Q96SQ5 575 aaPredicted RBP6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 PRDM6Q9NQX0 595 aa6.19□□□□□ -1.42
SHCBP1-202ENST00000563219 LGR5O75473 907 aa6.18□□□□□ -1.42
SHCBP1-202ENST00000563219 SPATA31C1P0DKV0 1188 aa6.18□□□□□ -1.42
SHCBP1-202ENST00000563219 ADH7P40394 386 aa6.18□□□□□ -1.42
SHCBP1-202ENST00000563219 CHRNA4P43681 627 aa6.18□□□□□ -1.42
SHCBP1-202ENST00000563219 IER5Q5VY09 327 aa6.18□□□□□ -1.42
SHCBP1-202ENST00000563219 MICALL1Q8N3F8 863 aa6.18□□□□□ -1.42
SHCBP1-202ENST00000563219 EFCC1Q9HA90 598 aa6.18□□□□□ -1.42
SHCBP1-202ENST00000563219 SPDYE3A6NKU9 549 aa6.17□□□□□ -1.42
SHCBP1-202ENST00000563219 K7ELQ4 463 aaPredicted RBP6.17□□□□□ -1.42
SHCBP1-202ENST00000563219 CDCA8Q53HL2 280 aa6.17□□□□□ -1.42
SHCBP1-202ENST00000563219 C20orf204Q6ZNR8 217 aa6.17□□□□□ -1.42
SHCBP1-202ENST00000563219 BHMTQ93088 406 aa6.17□□□□□ -1.42
SHCBP1-202ENST00000563219 DMGDHQ9UI17 866 aaKnown RBP6.17□□□□□ -1.42
SHCBP1-202ENST00000563219 BCS1LQ9Y276 419 aa6.17□□□□□ -1.42
SHCBP1-202ENST00000563219 ACIN1Q9UKV3 1341 aaKnown RBP6.17□□□□□ -1.42
SHCBP1-202ENST00000563219 TGFBR3LH3BV60 316 aa6.16□□□□□ -1.42
SHCBP1-202ENST00000563219 ALBP02768 609 aa6.16□□□□□ -1.42
SHCBP1-202ENST00000563219 FURINP09958 794 aa6.16□□□□□ -1.42
SHCBP1-202ENST00000563219 WEE1P30291 646 aa6.16□□□□□ -1.42
SHCBP1-202ENST00000563219 GSX2Q9BZM3 304 aa6.16□□□□□ -1.42
SHCBP1-202ENST00000563219 PRRT3Q5FWE3 981 aa6.15□□□□□ -1.42
SHCBP1-202ENST00000563219 C8orf86Q6ZUL3 223 aa6.15□□□□□ -1.42
SHCBP1-202ENST00000563219 FAM200AQ8TCP9 573 aa6.15□□□□□ -1.42
SHCBP1-202ENST00000563219 ZMIZ1Q9ULJ6 1067 aa6.15□□□□□ -1.42
SHCBP1-202ENST00000563219 NID1P14543 1247 aa6.14□□□□□ -1.43
SHCBP1-202ENST00000563219 INPP5BP32019 993 aa6.14□□□□□ -1.43
SHCBP1-202ENST00000563219 CCINQ13939 588 aa6.14□□□□□ -1.43
SHCBP1-202ENST00000563219 HOMEZQ8IX15 550 aa6.14□□□□□ -1.43
SHCBP1-202ENST00000563219 RETREG2Q8NC44 543 aa6.14□□□□□ -1.43
SHCBP1-202ENST00000563219 UBE2OQ9C0C9 1292 aaKnown RBP6.14□□□□□ -1.43
SHCBP1-202ENST00000563219 NOVA2Q9UNW9 492 aaKnown RBP6.14□□□□□ -1.43
SHCBP1-202ENST00000563219 FOXO3O43524 673 aa6.13□□□□□ -1.43
SHCBP1-202ENST00000563219 LILRB5O75023 590 aa6.13□□□□□ -1.43
SHCBP1-202ENST00000563219 GATA4P43694 442 aa6.13□□□□□ -1.43
SHCBP1-202ENST00000563219 TRIM28Q13263 835 aaKnown RBP6.13□□□□□ -1.43
SHCBP1-202ENST00000563219 IGFLR1Q9H665 355 aa6.13□□□□□ -1.43
SHCBP1-202ENST00000563219 QTRT2Q9H974 415 aaKnown RBP6.13□□□□□ -1.43
SHCBP1-202ENST00000563219 C11orf16Q9NQ32 467 aa6.13□□□□□ -1.43
SHCBP1-202ENST00000563219 KLK14Q9P0G3 267 aa6.13□□□□□ -1.43
SHCBP1-202ENST00000563219 SLC6A14Q9UN76 642 aa6.13□□□□□ -1.43
SHCBP1-202ENST00000563219 USTQ9Y2C2 406 aa6.13□□□□□ -1.43
SHCBP1-202ENST00000563219 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.13□□□□□ -1.43
SHCBP1-202ENST00000563219 APBA3O96018 575 aa6.12□□□□□ -1.43
SHCBP1-202ENST00000563219 EPB42P16452 691 aa6.12□□□□□ -1.43
SHCBP1-202ENST00000563219 GRNP28799 593 aaKnown RBP6.12□□□□□ -1.43
SHCBP1-202ENST00000563219 PDE4CQ08493 712 aa6.12□□□□□ -1.43
SHCBP1-202ENST00000563219 DGKZQ13574 1117 aa6.12□□□□□ -1.43
SHCBP1-202ENST00000563219 C11orf91Q3C1V1 193 aa6.12□□□□□ -1.43
SHCBP1-202ENST00000563219 TMEM164Q5U3C3 297 aa6.12□□□□□ -1.43
SHCBP1-202ENST00000563219 STK32AQ8WU08 396 aa6.12□□□□□ -1.43
SHCBP1-202ENST00000563219 PNMA5Q96PV4 448 aa6.12□□□□□ -1.43
SHCBP1-202ENST00000563219 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.12□□□□□ -1.43
SHCBP1-202ENST00000563219 DNAJB12Q9NXW2 375 aaKnown RBP6.12□□□□□ -1.43
SHCBP1-202ENST00000563219 TMEM88BA6NKF7 163 aa6.11□□□□□ -1.43
SHCBP1-202ENST00000563219 FAM229AH3BQW9 127 aa6.11□□□□□ -1.43
SHCBP1-202ENST00000563219 MICAL2O94851 1124 aa6.11□□□□□ -1.43
SHCBP1-202ENST00000563219 NFKB1P19838 968 aa6.11□□□□□ -1.43
SHCBP1-202ENST00000563219 IDH3AP50213 366 aa6.11□□□□□ -1.43
SHCBP1-202ENST00000563219 TBC1D8BQ0IIM8 1120 aa6.11□□□□□ -1.43
SHCBP1-202ENST00000563219 DOC2BQ14184 412 aa6.11□□□□□ -1.43
SHCBP1-202ENST00000563219 TRAPPC3LQ5T215 181 aa6.11□□□□□ -1.43
SHCBP1-202ENST00000563219 VTI1AQ96AJ9 217 aa6.11□□□□□ -1.43
SHCBP1-202ENST00000563219 MYO19Q96H55 970 aa6.11□□□□□ -1.43
SHCBP1-202ENST00000563219 MAP3K6O95382 1288 aa6.1□□□□□ -1.43
SHCBP1-202ENST00000563219 FAM69CQ0P6D2 419 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms