RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 C4BP0C0L5 1744 aa17.44■□□□□ 0.38
SPG7-206ENST00000562775 PLSCR1O15162 318 aa17.43■□□□□ 0.38
SPG7-206ENST00000562775 ZBTB38Q8NAP3 1195 aaPredicted RBP17.43■□□□□ 0.38
SPG7-206ENST00000562775 ZNF652Q9Y2D9 606 aa17.43■□□□□ 0.38
SPG7-206ENST00000562775 BCORQ6W2J9 1755 aa17.42■□□□□ 0.38
SPG7-206ENST00000562775 RAB11FIP3O75154 756 aa17.42■□□□□ 0.38
SPG7-206ENST00000562775 SURF6O75683 361 aaKnown RBP17.42■□□□□ 0.38
SPG7-206ENST00000562775 HSP90AB4PQ58FF6 505 aa17.42■□□□□ 0.38
SPG7-206ENST00000562775 CLEC4GQ6UXB4 293 aa17.42■□□□□ 0.38
SPG7-206ENST00000562775 NOP58Q9Y2X3 529 aaKnown RBP17.42■□□□□ 0.38
SPG7-206ENST00000562775 FOXO4P98177 505 aa17.41■□□□□ 0.38
SPG7-206ENST00000562775 TXNRD1Q16881 649 aa17.41■□□□□ 0.38
SPG7-206ENST00000562775 AK7Q96M32 723 aa17.41■□□□□ 0.38
SPG7-206ENST00000562775 CDHR2Q9BYE9 1310 aa17.41■□□□□ 0.38
SPG7-206ENST00000562775 APBB1O00213 710 aa17.4■□□□□ 0.38
SPG7-206ENST00000562775 PARP10Q53GL7 1025 aa17.4■□□□□ 0.38
SPG7-206ENST00000562775 RTL5Q5HYW3 569 aaPredicted RBP17.4■□□□□ 0.38
SPG7-206ENST00000562775 LRRCC1Q9C099 1032 aa17.4■□□□□ 0.38
SPG7-206ENST00000562775 NARFQ9UHQ1 456 aa17.4■□□□□ 0.38
SPG7-206ENST00000562775 UBN2Q6ZU65 1347 aa17.4■□□□□ 0.38
SPG7-206ENST00000562775 APBA3O96018 575 aa17.4■□□□□ 0.38
SPG7-206ENST00000562775 PLA2G12BQ9BX93 195 aa17.4■□□□□ 0.38
SPG7-206ENST00000562775 TRMT112Q9UI30 125 aaKnown RBP17.4■□□□□ 0.38
SPG7-206ENST00000562775 SMARCA5O60264 1052 aaPredicted RBP17.39■□□□□ 0.37
SPG7-206ENST00000562775 LMBR1LQ6UX01 489 aa17.39■□□□□ 0.37
SPG7-206ENST00000562775 PROM2Q8N271 834 aa17.39■□□□□ 0.37
SPG7-206ENST00000562775 FAM89AQ96GI7 184 aa17.39■□□□□ 0.37
SPG7-206ENST00000562775 TSHZ2Q9NRE2 1034 aa17.39■□□□□ 0.37
SPG7-206ENST00000562775 SCN7AQ01118 1682 aa17.38■□□□□ 0.37
SPG7-206ENST00000562775 ADRA2BP18089 450 aa17.38■□□□□ 0.37
SPG7-206ENST00000562775 TRAPPC3LQ5T215 181 aa17.38■□□□□ 0.37
SPG7-206ENST00000562775 ARHGEF1Q92888 912 aaKnown RBP17.38■□□□□ 0.37
SPG7-206ENST00000562775 KIF1BPQ96EK5 621 aa17.38■□□□□ 0.37
SPG7-206ENST00000562775 NIP7Q9Y221 180 aaKnown RBP eCLIP17.38■□□□□ 0.37
SPG7-206ENST00000562775 ZPR1O75312 459 aa17.37■□□□□ 0.37
SPG7-206ENST00000562775 RFX5P48382 616 aaPredicted RBP17.37■□□□□ 0.37
SPG7-206ENST00000562775 SUSD4Q5VX71 490 aa17.37■□□□□ 0.37
SPG7-206ENST00000562775 SMIM5Q71RC9 77 aa17.37■□□□□ 0.37
SPG7-206ENST00000562775 ERC1Q8IUD2 1116 aa17.37■□□□□ 0.37
SPG7-206ENST00000562775 RHPN1Q8TCX5 695 aa17.37■□□□□ 0.37
SPG7-206ENST00000562775 COPRSQ9NQ92 184 aa17.37■□□□□ 0.37
SPG7-206ENST00000562775 PA2G4Q9UQ80 394 aaKnown RBP17.37■□□□□ 0.37
SPG7-206ENST00000562775 USPL1Q5W0Q7 1092 aa17.36■□□□□ 0.37
SPG7-206ENST00000562775 AMIGO3Q86WK7 504 aa17.36■□□□□ 0.37
SPG7-206ENST00000562775 UTP14AQ9BVJ6 771 aaKnown RBP17.36■□□□□ 0.37
SPG7-206ENST00000562775 BCL2L12Q9HB09 334 aa17.36■□□□□ 0.37
SPG7-206ENST00000562775 TNS1Q9HBL0 1735 aaKnown RBP17.36■□□□□ 0.37
SPG7-206ENST00000562775 RFC4P35249 363 aa17.36■□□□□ 0.37
SPG7-206ENST00000562775 G3BP1Q13283 466 aaKnown RBP eCLIP17.36■□□□□ 0.37
SPG7-206ENST00000562775 OS9Q13438 667 aaPredicted RBP17.36■□□□□ 0.37
SPG7-206ENST00000562775 PLEKHM2Q8IWE5 1019 aa17.36■□□□□ 0.37
SPG7-206ENST00000562775 C16orf71Q8IYS4 520 aaPredicted RBP17.36■□□□□ 0.37
SPG7-206ENST00000562775 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
SPG7-206ENST00000562775 UBR3Q6ZT12 1888 aa17.35■□□□□ 0.37
SPG7-206ENST00000562775 IRS4O14654 1257 aaPredicted RBP17.35■□□□□ 0.37
SPG7-206ENST00000562775 CSF1RP07333 972 aa17.35■□□□□ 0.37
SPG7-206ENST00000562775 PTPN12Q05209 780 aaKnown RBP17.35■□□□□ 0.37
SPG7-206ENST00000562775 FAM161AQ3B820 660 aa17.35■□□□□ 0.37
SPG7-206ENST00000562775 SYNE4Q8N205 404 aa17.35■□□□□ 0.37
SPG7-206ENST00000562775 SRP68Q9UHB9 627 aaKnown RBP17.35■□□□□ 0.37
SPG7-206ENST00000562775 C4AP0C0L4 1744 aa17.34■□□□□ 0.37
SPG7-206ENST00000562775 SSFA2P28290 1259 aa17.34■□□□□ 0.37
SPG7-206ENST00000562775 BACH2Q9BYV9 841 aa17.34■□□□□ 0.37
SPG7-206ENST00000562775 USP42Q9H9J4 1324 aaKnown RBP17.34■□□□□ 0.37
SPG7-206ENST00000562775 CHMP3Q9Y3E7 222 aa17.34■□□□□ 0.37
SPG7-206ENST00000562775 RGPD3A6NKT7 1758 aaPredicted RBP17.33■□□□□ 0.37
SPG7-206ENST00000562775 RGPD4Q7Z3J3 1758 aa17.33■□□□□ 0.37
SPG7-206ENST00000562775 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.33■□□□□ 0.37
SPG7-206ENST00000562775 PDE8AO60658 829 aa17.33■□□□□ 0.37
SPG7-206ENST00000562775 PHF14O94880 888 aa17.33■□□□□ 0.37
SPG7-206ENST00000562775 NTSR2O95665 410 aa17.33■□□□□ 0.37
SPG7-206ENST00000562775 HSP90B1P14625 803 aaKnown RBP17.33■□□□□ 0.37
SPG7-206ENST00000562775 KLHDC4Q8TBB5 520 aa17.33■□□□□ 0.37
SPG7-206ENST00000562775 OTUD7AQ8TE49 926 aaPredicted RBP17.33■□□□□ 0.37
SPG7-206ENST00000562775 BCL11AQ9H165 835 aa17.33■□□□□ 0.37
SPG7-206ENST00000562775 TBC1D9BQ66K14 1250 aa17.32■□□□□ 0.36
SPG7-206ENST00000562775 OSBPL3Q9H4L5 887 aa17.32■□□□□ 0.36
SPG7-206ENST00000562775 IL1RAPL2Q9NP60 686 aa17.32■□□□□ 0.36
SPG7-206ENST00000562775 SALL3Q9BXA9 1300 aa17.32■□□□□ 0.36
SPG7-206ENST00000562775 FAM177BA6PVY3 158 aa17.32■□□□□ 0.36
SPG7-206ENST00000562775 CTSWP56202 376 aa17.32■□□□□ 0.36
SPG7-206ENST00000562775 C8orf34Q49A92 452 aa17.32■□□□□ 0.36
SPG7-206ENST00000562775 BMP2KLQ5H9B9 411 aa17.32■□□□□ 0.36
SPG7-206ENST00000562775 TTLL11Q8NHH1 800 aa17.32■□□□□ 0.36
SPG7-206ENST00000562775 SIL1Q9H173 461 aa17.32■□□□□ 0.36
SPG7-206ENST00000562775 MYH3P11055 1940 aa17.31■□□□□ 0.36
SPG7-206ENST00000562775 EP400Q96L91 3159 aa17.31■□□□□ 0.36
SPG7-206ENST00000562775 SASH1O94885 1247 aa17.31■□□□□ 0.36
SPG7-206ENST00000562775 CCDC57Q2TAC2 916 aa17.31■□□□□ 0.36
SPG7-206ENST00000562775 CLASRPQ8N2M8 674 aaKnown RBP17.31■□□□□ 0.36
SPG7-206ENST00000562775 SETDB2Q96T68 719 aa17.31■□□□□ 0.36
SPG7-206ENST00000562775 PDE1AP54750 535 aa17.3■□□□□ 0.36
SPG7-206ENST00000562775 BICDL1Q6ZP65 573 aa17.3■□□□□ 0.36
SPG7-206ENST00000562775 FBXO3Q9UK99 471 aa17.3■□□□□ 0.36
SPG7-206ENST00000562775 MX1P20591 662 aa17.29■□□□□ 0.36
SPG7-206ENST00000562775 IFIT5Q13325 482 aaKnown RBP17.29■□□□□ 0.36
SPG7-206ENST00000562775 TTC22Q5TAA0 569 aa17.29■□□□□ 0.36
SPG7-206ENST00000562775 AKT1S1Q96B36 256 aa17.29■□□□□ 0.36
SPG7-206ENST00000562775 NYXQ9GZU5 481 aa17.29■□□□□ 0.36
SPG7-206ENST00000562775 STAP2Q9UGK3 403 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms