RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 ZNF652Q9Y2D9 606 aa17.72■□□□□ 0.43
CNN2-204ENST00000562075 RAB11FIP3O75154 756 aa17.71■□□□□ 0.43
CNN2-204ENST00000562075 HSP90AB4PQ58FF6 505 aa17.71■□□□□ 0.43
CNN2-204ENST00000562075 ZNF34Q8IZ26 560 aa17.71■□□□□ 0.43
CNN2-204ENST00000562075 AK7Q96M32 723 aa17.71■□□□□ 0.43
CNN2-204ENST00000562075 TSHZ2Q9NRE2 1034 aa17.71■□□□□ 0.43
CNN2-204ENST00000562075 RTCBQ9Y3I0 505 aaKnown RBP17.71■□□□□ 0.43
CNN2-204ENST00000562075 SCN7AQ01118 1682 aa17.71■□□□□ 0.42
CNN2-204ENST00000562075 SMARCA5O60264 1052 aaPredicted RBP17.7■□□□□ 0.42
CNN2-204ENST00000562075 RABL6Q3YEC7 729 aaPredicted RBP17.7■□□□□ 0.42
CNN2-204ENST00000562075 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
CNN2-204ENST00000562075 LRRCC1Q9C099 1032 aa17.7■□□□□ 0.42
CNN2-204ENST00000562075 LRRC4BQ9NT99 713 aa17.7■□□□□ 0.42
CNN2-204ENST00000562075 HMGB2P26583 209 aaKnown RBP17.69■□□□□ 0.42
CNN2-204ENST00000562075 OS9Q13438 667 aaPredicted RBP17.69■□□□□ 0.42
CNN2-204ENST00000562075 BCL11AQ9H165 835 aa17.69■□□□□ 0.42
CNN2-204ENST00000562075 NOP58Q9Y2X3 529 aaKnown RBP17.69■□□□□ 0.42
CNN2-204ENST00000562075 UBN2Q6ZU65 1347 aa17.69■□□□□ 0.42
CNN2-204ENST00000562075 APBA3O96018 575 aa17.68■□□□□ 0.42
CNN2-204ENST00000562075 FOXO4P98177 505 aa17.68■□□□□ 0.42
CNN2-204ENST00000562075 PARP10Q53GL7 1025 aa17.68■□□□□ 0.42
CNN2-204ENST00000562075 LMBR1LQ6UX01 489 aa17.68■□□□□ 0.42
CNN2-204ENST00000562075 CLEC4GQ6UXB4 293 aa17.68■□□□□ 0.42
CNN2-204ENST00000562075 FAM89AQ96GI7 184 aa17.68■□□□□ 0.42
CNN2-204ENST00000562075 TRMT112Q9UI30 125 aaKnown RBP17.68■□□□□ 0.42
CNN2-204ENST00000562075 CHMP3Q9Y3E7 222 aa17.68■□□□□ 0.42
CNN2-204ENST00000562075 CDHR2Q9BYE9 1310 aa17.68■□□□□ 0.42
CNN2-204ENST00000562075 RGL2O15211 777 aa17.67■□□□□ 0.42
CNN2-204ENST00000562075 TXNRD1Q16881 649 aa17.67■□□□□ 0.42
CNN2-204ENST00000562075 SMIM5Q71RC9 77 aa17.67■□□□□ 0.42
CNN2-204ENST00000562075 NARFQ9UHQ1 456 aa17.67■□□□□ 0.42
CNN2-204ENST00000562075 PA2G4Q9UQ80 394 aaKnown RBP17.67■□□□□ 0.42
CNN2-204ENST00000562075 TNS1Q9HBL0 1735 aaKnown RBP17.67■□□□□ 0.42
CNN2-204ENST00000562075 ZPR1O75312 459 aa17.66■□□□□ 0.42
CNN2-204ENST00000562075 FAM161AQ3B820 660 aa17.66■□□□□ 0.42
CNN2-204ENST00000562075 ERC1Q8IUD2 1116 aa17.66■□□□□ 0.42
CNN2-204ENST00000562075 KIF1BPQ96EK5 621 aa17.66■□□□□ 0.42
CNN2-204ENST00000562075 PLA2G12BQ9BX93 195 aa17.66■□□□□ 0.42
CNN2-204ENST00000562075 NIP7Q9Y221 180 aaKnown RBP eCLIP17.66■□□□□ 0.42
CNN2-204ENST00000562075 PLSCR1O15162 318 aa17.65■□□□□ 0.42
CNN2-204ENST00000562075 PHF14O94880 888 aa17.65■□□□□ 0.42
CNN2-204ENST00000562075 G3BP1Q13283 466 aaKnown RBP eCLIP17.65■□□□□ 0.42
CNN2-204ENST00000562075 SUSD4Q5VX71 490 aa17.65■□□□□ 0.42
CNN2-204ENST00000562075 USPL1Q5W0Q7 1092 aa17.65■□□□□ 0.42
CNN2-204ENST00000562075 C16orf71Q8IYS4 520 aaPredicted RBP17.65■□□□□ 0.42
CNN2-204ENST00000562075 RHPN1Q8TCX5 695 aa17.65■□□□□ 0.42
CNN2-204ENST00000562075 UTP14AQ9BVJ6 771 aaKnown RBP17.65■□□□□ 0.42
CNN2-204ENST00000562075 SRP68Q9UHB9 627 aaKnown RBP17.65■□□□□ 0.42
CNN2-204ENST00000562075 C4AP0C0L4 1744 aa17.64■□□□□ 0.41
CNN2-204ENST00000562075 IRS4O14654 1257 aaPredicted RBP17.64■□□□□ 0.41
CNN2-204ENST00000562075 ADRA2BP18089 450 aa17.64■□□□□ 0.41
CNN2-204ENST00000562075 RFX5P48382 616 aaPredicted RBP17.64■□□□□ 0.41
CNN2-204ENST00000562075 TRAPPC3LQ5T215 181 aa17.64■□□□□ 0.41
CNN2-204ENST00000562075 PLEKHM2Q8IWE5 1019 aa17.64■□□□□ 0.41
CNN2-204ENST00000562075 ARHGEF1Q92888 912 aaKnown RBP17.64■□□□□ 0.41
CNN2-204ENST00000562075 UBR3Q6ZT12 1888 aa17.63■□□□□ 0.41
CNN2-204ENST00000562075 FAM177BA6PVY3 158 aa17.63■□□□□ 0.41
CNN2-204ENST00000562075 RFC4P35249 363 aa17.63■□□□□ 0.41
CNN2-204ENST00000562075 AMIGO3Q86WK7 504 aa17.63■□□□□ 0.41
CNN2-204ENST00000562075 SYNE4Q8N205 404 aa17.63■□□□□ 0.41
CNN2-204ENST00000562075 OTUD7AQ8TE49 926 aaPredicted RBP17.63■□□□□ 0.41
CNN2-204ENST00000562075 BACH2Q9BYV9 841 aa17.63■□□□□ 0.41
CNN2-204ENST00000562075 SIL1Q9H173 461 aa17.63■□□□□ 0.41
CNN2-204ENST00000562075 IL1RAPL2Q9NP60 686 aa17.63■□□□□ 0.41
CNN2-204ENST00000562075 COPRSQ9NQ92 184 aa17.63■□□□□ 0.41
CNN2-204ENST00000562075 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
CNN2-204ENST00000562075 RGPD3A6NKT7 1758 aaPredicted RBP17.63■□□□□ 0.41
CNN2-204ENST00000562075 RGPD4Q7Z3J3 1758 aa17.63■□□□□ 0.41
CNN2-204ENST00000562075 PTPN12Q05209 780 aaKnown RBP17.62■□□□□ 0.41
CNN2-204ENST00000562075 PROM2Q8N271 834 aa17.62■□□□□ 0.41
CNN2-204ENST00000562075 KLHDC4Q8TBB5 520 aa17.62■□□□□ 0.41
CNN2-204ENST00000562075 USP42Q9H9J4 1324 aaKnown RBP17.62■□□□□ 0.41
CNN2-204ENST00000562075 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.61■□□□□ 0.41
CNN2-204ENST00000562075 PDE8AO60658 829 aa17.61■□□□□ 0.41
CNN2-204ENST00000562075 NTSR2O95665 410 aa17.61■□□□□ 0.41
CNN2-204ENST00000562075 HSP90B1P14625 803 aaKnown RBP17.61■□□□□ 0.41
CNN2-204ENST00000562075 SSFA2P28290 1259 aa17.61■□□□□ 0.41
CNN2-204ENST00000562075 CTSWP56202 376 aa17.61■□□□□ 0.41
CNN2-204ENST00000562075 C8orf34Q49A92 452 aa17.61■□□□□ 0.41
CNN2-204ENST00000562075 BMP2KLQ5H9B9 411 aa17.61■□□□□ 0.41
CNN2-204ENST00000562075 TBC1D9BQ66K14 1250 aa17.61■□□□□ 0.41
CNN2-204ENST00000562075 BICDL1Q6ZP65 573 aa17.61■□□□□ 0.41
CNN2-204ENST00000562075 BCL2L12Q9HB09 334 aa17.61■□□□□ 0.41
CNN2-204ENST00000562075 MYH3P11055 1940 aa17.6■□□□□ 0.41
CNN2-204ENST00000562075 CSF1RP07333 972 aa17.6■□□□□ 0.41
CNN2-204ENST00000562075 CCDC57Q2TAC2 916 aa17.6■□□□□ 0.41
CNN2-204ENST00000562075 LAMB2P55268 1798 aa17.6■□□□□ 0.41
CNN2-204ENST00000562075 COL24A1Q17RW2 1714 aa17.59■□□□□ 0.41
CNN2-204ENST00000562075 MX1P20591 662 aa17.59■□□□□ 0.41
CNN2-204ENST00000562075 IFIT5Q13325 482 aaKnown RBP17.59■□□□□ 0.41
CNN2-204ENST00000562075 TTC22Q5TAA0 569 aa17.59■□□□□ 0.41
CNN2-204ENST00000562075 CLASRPQ8N2M8 674 aaKnown RBP17.59■□□□□ 0.41
CNN2-204ENST00000562075 SALL3Q9BXA9 1300 aa17.58■□□□□ 0.4
CNN2-204ENST00000562075 SASH1O94885 1247 aa17.58■□□□□ 0.4
CNN2-204ENST00000562075 PDE1AP54750 535 aa17.58■□□□□ 0.4
CNN2-204ENST00000562075 TAF7LQ5H9L4 462 aa17.58■□□□□ 0.4
CNN2-204ENST00000562075 NUTM1Q86Y26 1132 aa17.58■□□□□ 0.4
CNN2-204ENST00000562075 TTLL11Q8NHH1 800 aa17.58■□□□□ 0.4
CNN2-204ENST00000562075 CCDC85AQ96PX6 553 aaPredicted RBP17.58■□□□□ 0.4
CNN2-204ENST00000562075 SETDB2Q96T68 719 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms