RNA–Protein interactions for RNA: ENST00000562029.5

SPIRE2-204, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 2

Gene SPIRE2, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-204ENST00000562029 NKX1-1Q15270 411 aaPredicted RBP22.37■■□□□ 1.17
SPIRE2-204ENST00000562029 RABL6Q3YEC7 729 aaPredicted RBP22.37■■□□□ 1.17
SPIRE2-204ENST00000562029 COPRSQ9NQ92 184 aa22.37■■□□□ 1.17
SPIRE2-204ENST00000562029 PTPN12Q05209 780 aaKnown RBP22.37■■□□□ 1.17
SPIRE2-204ENST00000562029 INTS4Q96HW7 963 aaKnown RBP22.37■■□□□ 1.17
SPIRE2-204ENST00000562029 BOLA2Q9H3K6 86 aa22.37■■□□□ 1.17
SPIRE2-204ENST00000562029 ERBB4Q15303 1308 aa22.37■■□□□ 1.17
SPIRE2-204ENST00000562029 COL15A1P39059 1388 aa22.36■■□□□ 1.17
SPIRE2-204ENST00000562029 CASP7P55210 303 aa22.36■■□□□ 1.17
SPIRE2-204ENST00000562029 TTLL7Q6ZT98 887 aa22.36■■□□□ 1.17
SPIRE2-204ENST00000562029 KLHL40Q2TBA0 621 aa22.35■■□□□ 1.17
SPIRE2-204ENST00000562029 PANK2Q9BZ23 570 aa22.35■■□□□ 1.17
SPIRE2-204ENST00000562029 DDX49Q9Y6V7 483 aaKnown RBP22.35■■□□□ 1.17
SPIRE2-204ENST00000562029 A1BGP04217 495 aa22.35■■□□□ 1.17
SPIRE2-204ENST00000562029 FOXD4L5Q5VV16 416 aaPredicted RBP22.35■■□□□ 1.17
SPIRE2-204ENST00000562029 FOXD4L4Q8WXT5 416 aaPredicted RBP22.35■■□□□ 1.17
SPIRE2-204ENST00000562029 CHAMP1Q96JM3 812 aa22.35■■□□□ 1.17
SPIRE2-204ENST00000562029 FAM227BQ96M60 508 aa22.35■■□□□ 1.17
SPIRE2-204ENST00000562029 TTC14Q96N46 770 aa22.35■■□□□ 1.17
SPIRE2-204ENST00000562029 EVA1CP58658 441 aa22.34■■□□□ 1.17
SPIRE2-204ENST00000562029 LMBRD1Q9NUN5 540 aa22.34■■□□□ 1.17
SPIRE2-204ENST00000562029 NUP188Q5SRE5 1749 aa22.34■■□□□ 1.17
SPIRE2-204ENST00000562029 NHSL1Q5SYE7 1610 aa22.33■■□□□ 1.17
SPIRE2-204ENST00000562029 NMIQ13287 307 aaPredicted RBP22.33■■□□□ 1.17
SPIRE2-204ENST00000562029 GAS2L3Q86XJ1 694 aa22.33■■□□□ 1.17
SPIRE2-204ENST00000562029 MRE11P49959 708 aa22.33■■□□□ 1.16
SPIRE2-204ENST00000562029 TFCP2Q12800 502 aa22.33■■□□□ 1.16
SPIRE2-204ENST00000562029 GRPEL1Q9HAV7 217 aa22.33■■□□□ 1.16
SPIRE2-204ENST00000562029 TNS2Q63HR2 1409 aa22.32■■□□□ 1.16
SPIRE2-204ENST00000562029 TOGARAM1Q9Y4F4 1720 aa22.32■■□□□ 1.16
SPIRE2-204ENST00000562029 BRD1O95696 1058 aa22.32■■□□□ 1.16
SPIRE2-204ENST00000562029 AK2P54819 239 aa22.32■■□□□ 1.16
SPIRE2-204ENST00000562029 PRPF40BQ6NWY9 871 aaKnown RBP22.32■■□□□ 1.16
SPIRE2-204ENST00000562029 CCDC171Q6TFL3 1326 aa22.32■■□□□ 1.16
SPIRE2-204ENST00000562029 CPA1P15085 419 aa22.31■■□□□ 1.16
SPIRE2-204ENST00000562029 TNNI3KQ59H18 835 aa22.31■■□□□ 1.16
SPIRE2-204ENST00000562029 FSD1Q9BTV5 496 aa22.31■■□□□ 1.16
SPIRE2-204ENST00000562029 DBNLQ9UJU6 430 aaKnown RBP22.31■■□□□ 1.16
SPIRE2-204ENST00000562029 FPGT-TNNI3KV9GXZ4 949 aa22.31■■□□□ 1.16
SPIRE2-204ENST00000562029 HIP1O00291 1037 aa22.31■■□□□ 1.16
SPIRE2-204ENST00000562029 CASTP20810 708 aaKnown RBP22.31■■□□□ 1.16
SPIRE2-204ENST00000562029 LMBR1LQ6UX01 489 aa22.31■■□□□ 1.16
SPIRE2-204ENST00000562029 ISY1Q9ULR0 285 aaKnown RBP22.31■■□□□ 1.16
SPIRE2-204ENST00000562029 TJP1Q07157 1748 aa22.3■■□□□ 1.16
SPIRE2-204ENST00000562029 H7C1W4 665 aa22.3■■□□□ 1.16
SPIRE2-204ENST00000562029 ZBTB3Q9H5J0 574 aa22.3■■□□□ 1.16
SPIRE2-204ENST00000562029 A0A0D9SFI3 127 aa22.3■■□□□ 1.16
SPIRE2-204ENST00000562029 FOXO4P98177 505 aa22.3■■□□□ 1.16
SPIRE2-204ENST00000562029 ADCK5Q3MIX3 580 aa22.3■■□□□ 1.16
SPIRE2-204ENST00000562029 EDC3Q96F86 508 aaKnown RBP22.3■■□□□ 1.16
SPIRE2-204ENST00000562029 LARP6Q9BRS8 491 aaKnown RBP22.3■■□□□ 1.16
SPIRE2-204ENST00000562029 PRPF40AO75400 957 aaKnown RBP22.29■■□□□ 1.16
SPIRE2-204ENST00000562029 RUFY3Q7L099 469 aa22.29■■□□□ 1.16
SPIRE2-204ENST00000562029 CWC25Q9NXE8 425 aaPredicted RBP22.29■■□□□ 1.16
SPIRE2-204ENST00000562029 KCNB2Q92953 911 aa22.29■■□□□ 1.16
SPIRE2-204ENST00000562029 JAKMIP1Q96N16 626 aaKnown RBP22.29■■□□□ 1.16
SPIRE2-204ENST00000562029 CHMP3Q9Y3E7 222 aa22.29■■□□□ 1.16
SPIRE2-204ENST00000562029 RBM8AQ9Y5S9 174 aaKnown RBP22.29■■□□□ 1.16
SPIRE2-204ENST00000562029 NECTIN1Q15223 517 aa22.28■■□□□ 1.16
SPIRE2-204ENST00000562029 SNRKQ9NRH2 765 aa22.27■■□□□ 1.16
SPIRE2-204ENST00000562029 NCLP19338 710 aaKnown RBP22.27■■□□□ 1.16
SPIRE2-204ENST00000562029 MED23Q9ULK4 1368 aa22.26■■□□□ 1.15
SPIRE2-204ENST00000562029 ATP5JP18859 108 aa22.26■■□□□ 1.15
SPIRE2-204ENST00000562029 MAP4K1Q92918 833 aa22.26■■□□□ 1.15
SPIRE2-204ENST00000562029 DBNDD2Q9BQY9 259 aa22.26■■□□□ 1.15
SPIRE2-204ENST00000562029 TMOD3Q9NYL9 352 aa22.26■■□□□ 1.15
SPIRE2-204ENST00000562029 LIMCH1Q9UPQ0 1083 aa22.26■■□□□ 1.15
SPIRE2-204ENST00000562029 NDUFB9Q9Y6M9 179 aa22.26■■□□□ 1.15
SPIRE2-204ENST00000562029 CREB3L3Q68CJ9 461 aa22.26■■□□□ 1.15
SPIRE2-204ENST00000562029 CAVIN1Q6NZI2 390 aaKnown RBP22.26■■□□□ 1.15
SPIRE2-204ENST00000562029 GPT2Q8TD30 523 aa22.25■■□□□ 1.15
SPIRE2-204ENST00000562029 LARGE1O95461 756 aa22.25■■□□□ 1.15
SPIRE2-204ENST00000562029 KCNJ4P48050 445 aa22.25■■□□□ 1.15
SPIRE2-204ENST00000562029 ZSWIM6Q9HCJ5 1215 aa22.25■■□□□ 1.15
SPIRE2-204ENST00000562029 RPAP1Q9BWH6 1393 aaPredicted RBP22.24■■□□□ 1.15
SPIRE2-204ENST00000562029 ZNF589Q86UQ0 364 aaPredicted RBP22.24■■□□□ 1.15
SPIRE2-204ENST00000562029 TM6SF1Q9BZW5 370 aa22.24■■□□□ 1.15
SPIRE2-204ENST00000562029 PDRG1Q9NUG6 133 aa22.24■■□□□ 1.15
SPIRE2-204ENST00000562029 BTG4Q9NY30 223 aa22.24■■□□□ 1.15
SPIRE2-204ENST00000562029 ZKSCAN1P17029 563 aaPredicted RBP22.23■■□□□ 1.15
SPIRE2-204ENST00000562029 CCDC191Q8NCU4 936 aa22.23■■□□□ 1.15
SPIRE2-204ENST00000562029 VPS53Q5VIR6 699 aa22.23■■□□□ 1.15
SPIRE2-204ENST00000562029 CYP46A1Q9Y6A2 500 aa22.23■■□□□ 1.15
SPIRE2-204ENST00000562029 SLC27A2O14975 620 aa22.22■■□□□ 1.15
SPIRE2-204ENST00000562029 ATG9AQ7Z3C6 839 aa22.22■■□□□ 1.15
SPIRE2-204ENST00000562029 DNAJC2Q99543 621 aaKnown RBP22.22■■□□□ 1.15
SPIRE2-204ENST00000562029 ASAP1Q9ULH1 1129 aa22.22■■□□□ 1.15
SPIRE2-204ENST00000562029 ZNF330Q9Y3S2 320 aaPredicted RBP22.22■■□□□ 1.15
SPIRE2-204ENST00000562029 ZSCAN23Q3MJ62 389 aa22.21■■□□□ 1.15
SPIRE2-204ENST00000562029 PIGBQ92521 554 aa22.21■■□□□ 1.15
SPIRE2-204ENST00000562029 CCDC9Q9Y3X0 531 aaKnown RBP22.21■■□□□ 1.15
SPIRE2-204ENST00000562029 JCADQ9P266 1359 aa22.21■■□□□ 1.15
SPIRE2-204ENST00000562029 WDR33Q9C0J8 1336 aaKnown RBP22.21■■□□□ 1.15
SPIRE2-204ENST00000562029 COL9A3Q14050 684 aaPredicted RBP22.21■■□□□ 1.15
SPIRE2-204ENST00000562029 RBM27Q9P2N5 1060 aaKnown RBP22.21■■□□□ 1.15
SPIRE2-204ENST00000562029 CHGBP05060 677 aa22.2■■□□□ 1.14
SPIRE2-204ENST00000562029 FOXD4L6Q3SYB3 417 aaPredicted RBP22.2■■□□□ 1.14
SPIRE2-204ENST00000562029 FOXD4L3Q6VB84 417 aaPredicted RBP22.2■■□□□ 1.14
SPIRE2-204ENST00000562029 DNAJC10Q8IXB1 793 aa22.2■■□□□ 1.14
SPIRE2-204ENST00000562029 NSFL1CQ9UNZ2 370 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms