RNA–Protein interactions for RNA: ENST00000561610.1

PPP4C-202, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-202ENST00000561610 CT47B1P0C2W7 299 aaPredicted RBP23.78■■□□□ 1.4
PPP4C-202ENST00000561610 DPEP1P16444 411 aa23.78■■□□□ 1.4
PPP4C-202ENST00000561610 TGFB2P61812 414 aa23.78■■□□□ 1.4
PPP4C-202ENST00000561610 COL13A1Q5TAT6 717 aaPredicted RBP23.78■■□□□ 1.4
PPP4C-202ENST00000561610 SSH1Q8WYL5 1049 aa23.78■■□□□ 1.4
PPP4C-202ENST00000561610 TRMT112Q9UI30 125 aaKnown RBP23.78■■□□□ 1.4
PPP4C-202ENST00000561610 N4BP2Q86UW6 1770 aaPredicted RBP23.78■■□□□ 1.4
PPP4C-202ENST00000561610 NRXN2Q9P2S2 1712 aa23.78■■□□□ 1.4
PPP4C-202ENST00000561610 CHRNA5P30532 468 aa23.77■■□□□ 1.4
PPP4C-202ENST00000561610 NLRP10Q86W26 655 aa23.77■■□□□ 1.4
PPP4C-202ENST00000561610 C2CD5Q86YS7 1000 aa23.77■■□□□ 1.4
PPP4C-202ENST00000561610 MRPL50Q8N5N7 158 aaKnown RBP23.77■■□□□ 1.4
PPP4C-202ENST00000561610 METTL22Q9BUU2 404 aaPredicted RBP23.77■■□□□ 1.4
PPP4C-202ENST00000561610 PDE6BP35913 854 aa23.76■■□□□ 1.39
PPP4C-202ENST00000561610 ERFEQ4G0M1 354 aa23.76■■□□□ 1.39
PPP4C-202ENST00000561610 KIF13BQ9NQT8 1826 aa23.75■■□□□ 1.39
PPP4C-202ENST00000561610 H0YIN7 160 aa23.75■■□□□ 1.39
PPP4C-202ENST00000561610 ALDH1L2Q3SY69 923 aa23.75■■□□□ 1.39
PPP4C-202ENST00000561610 RTL5Q5HYW3 569 aaPredicted RBP23.75■■□□□ 1.39
PPP4C-202ENST00000561610 DNAJC5GQ8N7S2 189 aa23.75■■□□□ 1.39
PPP4C-202ENST00000561610 BRIP1Q9BX63 1249 aa23.75■■□□□ 1.39
PPP4C-202ENST00000561610 PXDNLA1KZ92 1463 aa23.74■■□□□ 1.39
PPP4C-202ENST00000561610 SLC4A10Q6U841 1118 aa23.74■■□□□ 1.39
PPP4C-202ENST00000561610 TNS4Q8IZW8 715 aa23.74■■□□□ 1.39
PPP4C-202ENST00000561610 DNAAF4Q8WXU2 420 aa23.74■■□□□ 1.39
PPP4C-202ENST00000561610 ISCA1Q9BUE6 129 aa23.74■■□□□ 1.39
PPP4C-202ENST00000561610 WDR90Q96KV7 1748 aa23.73■■□□□ 1.39
PPP4C-202ENST00000561610 F6X3S4 739 aa23.73■■□□□ 1.39
PPP4C-202ENST00000561610 NTSR2O95665 410 aa23.73■■□□□ 1.39
PPP4C-202ENST00000561610 ZNF622Q969S3 477 aaKnown RBP eCLIP23.73■■□□□ 1.39
PPP4C-202ENST00000561610 CWC25Q9NXE8 425 aaPredicted RBP23.72■■□□□ 1.39
PPP4C-202ENST00000561610 TOMM70O94826 608 aa23.71■■□□□ 1.39
PPP4C-202ENST00000561610 BCS1LQ9Y276 419 aa23.71■■□□□ 1.39
PPP4C-202ENST00000561610 ABCC12Q96J65 1359 aa23.71■■□□□ 1.39
PPP4C-202ENST00000561610 IBTKQ9P2D0 1353 aaPredicted RBP23.71■■□□□ 1.39
PPP4C-202ENST00000561610 ANKRD31Q8N7Z5 1873 aa23.71■■□□□ 1.39
PPP4C-202ENST00000561610 SH3TC1Q8TE82 1336 aa23.7■■□□□ 1.39
PPP4C-202ENST00000561610 RARSP54136 660 aaKnown RBP23.7■■□□□ 1.38
PPP4C-202ENST00000561610 CWF19L2Q2TBE0 894 aaKnown RBP23.7■■□□□ 1.38
PPP4C-202ENST00000561610 PIM2Q9P1W9 311 aa23.7■■□□□ 1.38
PPP4C-202ENST00000561610 HTRA3P83110 453 aa23.69■■□□□ 1.38
PPP4C-202ENST00000561610 CCDC191Q8NCU4 936 aa23.69■■□□□ 1.38
PPP4C-202ENST00000561610 JARID2Q92833 1246 aaPredicted RBP23.69■■□□□ 1.38
PPP4C-202ENST00000561610 FAM89AQ96GI7 184 aa23.69■■□□□ 1.38
PPP4C-202ENST00000561610 HCLS1P14317 486 aaPredicted RBP23.68■■□□□ 1.38
PPP4C-202ENST00000561610 SYNE4Q8N205 404 aa23.68■■□□□ 1.38
PPP4C-202ENST00000561610 NOB1Q9ULX3 412 aaKnown RBP23.68■■□□□ 1.38
PPP4C-202ENST00000561610 PDZRN3Q9UPQ7 1066 aa23.68■■□□□ 1.38
PPP4C-202ENST00000561610 KIAA1551Q9HCM1 1747 aa23.68■■□□□ 1.38
PPP4C-202ENST00000561610 PTPRCP08575 1304 aa23.68■■□□□ 1.38
PPP4C-202ENST00000561610 PRELPP51888 382 aa23.67■■□□□ 1.38
PPP4C-202ENST00000561610 TRIM28Q13263 835 aaKnown RBP23.67■■□□□ 1.38
PPP4C-202ENST00000561610 RPGRQ92834 1020 aaKnown RBP23.67■■□□□ 1.38
PPP4C-202ENST00000561610 FRAT1Q92837 279 aaPredicted RBP23.67■■□□□ 1.38
PPP4C-202ENST00000561610 NLRP3Q96P20 1036 aa23.67■■□□□ 1.38
PPP4C-202ENST00000561610 RNF123Q5XPI4 1314 aa23.67■■□□□ 1.38
PPP4C-202ENST00000561610 NEURL1BA8MQ27 555 aa23.66■■□□□ 1.38
PPP4C-202ENST00000561610 IGKV5-2P06315 115 aa23.66■■□□□ 1.38
PPP4C-202ENST00000561610 DALRD3Q5D0E6 543 aaKnown RBP23.66■■□□□ 1.38
PPP4C-202ENST00000561610 KLRG1Q96E93 195 aa23.66■■□□□ 1.38
PPP4C-202ENST00000561610 BCAR3O75815 825 aa23.65■■□□□ 1.38
PPP4C-202ENST00000561610 ZBTB38Q8NAP3 1195 aaPredicted RBP23.65■■□□□ 1.38
PPP4C-202ENST00000561610 LINS1Q8NG48 757 aa23.65■■□□□ 1.38
PPP4C-202ENST00000561610 MASTLQ96GX5 879 aa23.65■■□□□ 1.38
PPP4C-202ENST00000561610 ZNF219Q9P2Y4 722 aaPredicted RBP23.65■■□□□ 1.38
PPP4C-202ENST00000561610 TNRC6CQ9HCJ0 1690 aaKnown RBP23.64■■□□□ 1.38
PPP4C-202ENST00000561610 IRS4O14654 1257 aaPredicted RBP23.64■■□□□ 1.38
PPP4C-202ENST00000561610 KCNA3P22001 575 aa23.64■■□□□ 1.38
PPP4C-202ENST00000561610 NMRK2Q9NPI5 230 aa23.64■■□□□ 1.38
PPP4C-202ENST00000561610 KIF16BQ96L93 1317 aa23.64■■□□□ 1.37
PPP4C-202ENST00000561610 COL11A2P13942 1736 aaPredicted RBP23.63■■□□□ 1.37
PPP4C-202ENST00000561610 NPR1P16066 1061 aa23.63■■□□□ 1.37
PPP4C-202ENST00000561610 TTLL6Q8N841 843 aa23.63■■□□□ 1.37
PPP4C-202ENST00000561610 SRCIN1Q9C0H9 1055 aa23.63■■□□□ 1.37
PPP4C-202ENST00000561610 PCCAP05165 728 aaPredicted RBP23.62■■□□□ 1.37
PPP4C-202ENST00000561610 SRGNP10124 158 aa23.62■■□□□ 1.37
PPP4C-202ENST00000561610 C16orf71Q8IYS4 520 aaPredicted RBP23.62■■□□□ 1.37
PPP4C-202ENST00000561610 CNKSR1Q969H4 720 aa23.62■■□□□ 1.37
PPP4C-202ENST00000561610 API5Q9BZZ5 524 aaKnown RBP23.62■■□□□ 1.37
PPP4C-202ENST00000561610 CACNA1SQ13698 1873 aa23.62■■□□□ 1.37
PPP4C-202ENST00000561610 HSP90B1P14625 803 aaKnown RBP23.61■■□□□ 1.37
PPP4C-202ENST00000561610 GCKRQ14397 625 aa23.61■■□□□ 1.37
PPP4C-202ENST00000561610 SLC10A5Q5PT55 438 aa23.61■■□□□ 1.37
PPP4C-202ENST00000561610 BEND3Q5T5X7 828 aa23.61■■□□□ 1.37
PPP4C-202ENST00000561610 STYK1Q6J9G0 422 aa23.61■■□□□ 1.37
PPP4C-202ENST00000561610 C3orf67Q6ZVT6 689 aa23.61■■□□□ 1.37
PPP4C-202ENST00000561610 RBM17Q96I25 401 aaKnown RBP23.61■■□□□ 1.37
PPP4C-202ENST00000561610 DLEC1Q9Y238 1755 aa23.6■■□□□ 1.37
PPP4C-202ENST00000561610 IPO8O15397 1037 aaKnown RBP23.6■■□□□ 1.37
PPP4C-202ENST00000561610 UBE3BQ7Z3V4 1068 aa23.6■■□□□ 1.37
PPP4C-202ENST00000561610 C9orf78Q9NZ63 289 aaPredicted RBP23.6■■□□□ 1.37
PPP4C-202ENST00000561610 RIC1Q4ADV7 1423 aa23.59■■□□□ 1.37
PPP4C-202ENST00000561610 BRCA1P38398 1863 aaKnown RBP23.59■■□□□ 1.37
PPP4C-202ENST00000561610 ALDH1B1P30837 517 aa23.59■■□□□ 1.37
PPP4C-202ENST00000561610 JMYQ8N9B5 988 aa23.59■■□□□ 1.37
PPP4C-202ENST00000561610 DDX60Q8IY21 1712 aaKnown RBP23.58■■□□□ 1.36
PPP4C-202ENST00000561610 KLRG2A4D1S0 409 aaPredicted RBP23.58■■□□□ 1.36
PPP4C-202ENST00000561610 ALDH1L1O75891 902 aa23.58■■□□□ 1.36
PPP4C-202ENST00000561610 ARHGAP27Q6ZUM4 889 aa23.58■■□□□ 1.36
PPP4C-202ENST00000561610 DDX46Q7L014 1031 aaKnown RBP23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms