RNA–Protein interactions for RNA: ENST00000561003.5

CSHL1-210, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2 BASIC

Gene CSHL1, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-210ENST00000561003 ERBB4Q15303 1308 aa13.61□□□□□ -0.23
CSHL1-210ENST00000561003 WDR33Q9C0J8 1336 aaKnown RBP13.61□□□□□ -0.23
CSHL1-210ENST00000561003 ZNF541Q9H0D2 1346 aa13.61□□□□□ -0.23
CSHL1-210ENST00000561003 COL3A1P02461 1466 aaPredicted RBP13.61□□□□□ -0.23
CSHL1-210ENST00000561003 BBOX1O75936 387 aa13.6□□□□□ -0.23
CSHL1-210ENST00000561003 EIF4A1P60842 406 aaKnown RBP13.6□□□□□ -0.23
CSHL1-210ENST00000561003 OLFM4Q6UX06 510 aa13.6□□□□□ -0.23
CSHL1-210ENST00000561003 NIM1KQ8IY84 436 aa13.6□□□□□ -0.23
CSHL1-210ENST00000561003 RNF123Q5XPI4 1314 aa13.6□□□□□ -0.23
CSHL1-210ENST00000561003 LBX1P52954 281 aa13.59□□□□□ -0.23
CSHL1-210ENST00000561003 SLC10A5Q5PT55 438 aa13.59□□□□□ -0.23
CSHL1-210ENST00000561003 GIGYF2Q6Y7W6 1299 aaKnown RBP13.59□□□□□ -0.23
CSHL1-210ENST00000561003 NUTM1Q86Y26 1132 aa13.59□□□□□ -0.23
CSHL1-210ENST00000561003 ZNF34Q8IZ26 560 aa13.59□□□□□ -0.23
CSHL1-210ENST00000561003 BABAM1Q9NWV8 329 aa13.59□□□□□ -0.23
CSHL1-210ENST00000561003 PPEF1O14829 653 aaPredicted RBP13.58□□□□□ -0.24
CSHL1-210ENST00000561003 MYL6BP14649 208 aa13.58□□□□□ -0.24
CSHL1-210ENST00000561003 MAP2K2P36507 400 aa13.58□□□□□ -0.24
CSHL1-210ENST00000561003 NFE2L2Q16236 605 aa13.58□□□□□ -0.24
CSHL1-210ENST00000561003 GPR101Q96P66 508 aaPredicted RBP13.58□□□□□ -0.24
CSHL1-210ENST00000561003 UTP14AQ9BVJ6 771 aaKnown RBP13.58□□□□□ -0.24
CSHL1-210ENST00000561003 UBR2Q8IWV8 1755 aa13.58□□□□□ -0.24
CSHL1-210ENST00000561003 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.24
CSHL1-210ENST00000561003 GPTP24298 496 aa13.57□□□□□ -0.24
CSHL1-210ENST00000561003 TNIP1Q15025 636 aa13.57□□□□□ -0.24
CSHL1-210ENST00000561003 HSP90AB3PQ58FF7 597 aa13.57□□□□□ -0.24
CSHL1-210ENST00000561003 SUSD4Q5VX71 490 aa13.57□□□□□ -0.24
CSHL1-210ENST00000561003 TTLL7Q6ZT98 887 aa13.57□□□□□ -0.24
CSHL1-210ENST00000561003 ZBTB3Q9H5J0 574 aa13.57□□□□□ -0.24
CSHL1-210ENST00000561003 ADARB2Q9NS39 739 aaKnown RBP13.57□□□□□ -0.24
CSHL1-210ENST00000561003 ZNRF3Q9ULT6 936 aa13.57□□□□□ -0.24
CSHL1-210ENST00000561003 ATP6V0A2Q9Y487 856 aa13.57□□□□□ -0.24
CSHL1-210ENST00000561003 MAPK8IP3Q9UPT6 1336 aa13.57□□□□□ -0.24
CSHL1-210ENST00000561003 DLEC1Q9Y238 1755 aa13.56□□□□□ -0.24
CSHL1-210ENST00000561003 PPIP5K2O43314 1243 aa13.56□□□□□ -0.24
CSHL1-210ENST00000561003 CA12O43570 354 aa13.56□□□□□ -0.24
CSHL1-210ENST00000561003 EPS15P42566 896 aa13.56□□□□□ -0.24
CSHL1-210ENST00000561003 PAXIP1Q6ZW49 1069 aaPredicted RBP13.56□□□□□ -0.24
CSHL1-210ENST00000561003 ZC3H15Q8WU90 426 aaKnown RBP13.56□□□□□ -0.24
CSHL1-210ENST00000561003 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
CSHL1-210ENST00000561003 SCNN1DP51172 638 aa13.55□□□□□ -0.24
CSHL1-210ENST00000561003 TMC4Q7Z404 712 aa13.55□□□□□ -0.24
CSHL1-210ENST00000561003 SP8Q8IXZ3 490 aa13.55□□□□□ -0.24
CSHL1-210ENST00000561003 CAPNS2Q96L46 248 aa13.55□□□□□ -0.24
CSHL1-210ENST00000561003 FER1L6Q2WGJ9 1857 aa13.55□□□□□ -0.24
CSHL1-210ENST00000561003 TCERG1O14776 1098 aaKnown RBP13.54□□□□□ -0.24
CSHL1-210ENST00000561003 HSPA8P11142 646 aaKnown RBP13.54□□□□□ -0.24
CSHL1-210ENST00000561003 LMOD3Q0VAK6 560 aa13.54□□□□□ -0.24
CSHL1-210ENST00000561003 DPP8Q6V1X1 898 aaPredicted RBP13.54□□□□□ -0.24
CSHL1-210ENST00000561003 MPNDQ8N594 471 aa13.54□□□□□ -0.24
CSHL1-210ENST00000561003 HHIPL1Q96JK4 782 aa13.54□□□□□ -0.24
CSHL1-210ENST00000561003 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
CSHL1-210ENST00000561003 RTFDC1Q9BY42 306 aaPredicted RBP13.54□□□□□ -0.24
CSHL1-210ENST00000561003 GPRC5DQ9NZD1 345 aa13.54□□□□□ -0.24
CSHL1-210ENST00000561003 TSPYL4Q9UJ04 414 aa13.54□□□□□ -0.24
CSHL1-210ENST00000561003 RIC1Q4ADV7 1423 aa13.54□□□□□ -0.24
CSHL1-210ENST00000561003 NTSR2O95665 410 aa13.53□□□□□ -0.24
CSHL1-210ENST00000561003 CXCL9Q07325 125 aa13.53□□□□□ -0.24
CSHL1-210ENST00000561003 DDX46Q7L014 1031 aaKnown RBP13.53□□□□□ -0.24
CSHL1-210ENST00000561003 ABHD8Q96I13 439 aa13.53□□□□□ -0.24
CSHL1-210ENST00000561003 BCL2L13Q9BXK5 485 aa13.53□□□□□ -0.24
CSHL1-210ENST00000561003 PGAP2Q9UHJ9 254 aa13.53□□□□□ -0.24
CSHL1-210ENST00000561003 TLL2Q9Y6L7 1015 aa13.53□□□□□ -0.24
CSHL1-210ENST00000561003 H7C1D1 291 aa13.52□□□□□ -0.25
CSHL1-210ENST00000561003 EIF2S2P20042 333 aaKnown RBP13.52□□□□□ -0.25
CSHL1-210ENST00000561003 CST9Q5W186 159 aa13.52□□□□□ -0.25
CSHL1-210ENST00000561003 CIAPIN1Q6FI81 312 aa13.52□□□□□ -0.25
CSHL1-210ENST00000561003 CDC37L1Q7L3B6 337 aa13.52□□□□□ -0.25
CSHL1-210ENST00000561003 UBN2Q6ZU65 1347 aa13.52□□□□□ -0.25
CSHL1-210ENST00000561003 CDHR2Q9BYE9 1310 aa13.52□□□□□ -0.25
CSHL1-210ENST00000561003 SCN7AQ01118 1682 aa13.52□□□□□ -0.25
CSHL1-210ENST00000561003 SCN4AP35499 1836 aa13.52□□□□□ -0.25
CSHL1-210ENST00000561003 ANKRD31Q8N7Z5 1873 aa13.51□□□□□ -0.25
CSHL1-210ENST00000561003 RIPK4P57078 832 aa13.51□□□□□ -0.25
CSHL1-210ENST00000561003 AOC3Q16853 763 aa13.51□□□□□ -0.25
CSHL1-210ENST00000561003 TRMT112Q9UI30 125 aaKnown RBP13.51□□□□□ -0.25
CSHL1-210ENST00000561003 DICER1Q9UPY3 1922 aaKnown RBP13.51□□□□□ -0.25
CSHL1-210ENST00000561003 TIAM2Q8IVF5 1701 aa13.5□□□□□ -0.25
CSHL1-210ENST00000561003 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
CSHL1-210ENST00000561003 CELF2O95319 508 aaKnown RBP13.5□□□□□ -0.25
CSHL1-210ENST00000561003 HSP90B1P14625 803 aaKnown RBP13.5□□□□□ -0.25
CSHL1-210ENST00000561003 KIAA2012Q0VF49 1180 aa13.5□□□□□ -0.25
CSHL1-210ENST00000561003 GRM1Q13255 1194 aa13.5□□□□□ -0.25
CSHL1-210ENST00000561003 TCIRG1Q13488 830 aa13.5□□□□□ -0.25
CSHL1-210ENST00000561003 CYP4F22Q6NT55 531 aa13.5□□□□□ -0.25
CSHL1-210ENST00000561003 COPS6Q7L5N1 327 aa13.5□□□□□ -0.25
CSHL1-210ENST00000561003 SAPCD2Q86UD0 394 aa13.5□□□□□ -0.25
CSHL1-210ENST00000561003 CCDC88AQ3V6T2 1871 aa13.49□□□□□ -0.25
CSHL1-210ENST00000561003 SH3TC1Q8TE82 1336 aa13.49□□□□□ -0.25
CSHL1-210ENST00000561003 GMPSP49915 693 aaPredicted RBP13.49□□□□□ -0.25
CSHL1-210ENST00000561003 PDIA6Q15084 440 aa13.49□□□□□ -0.25
CSHL1-210ENST00000561003 DPF2Q92785 391 aa13.49□□□□□ -0.25
CSHL1-210ENST00000561003 THUMPD2Q9BTF0 503 aaKnown RBP13.49□□□□□ -0.25
CSHL1-210ENST00000561003 CCDC85CA6NKD9 419 aa13.48□□□□□ -0.25
CSHL1-210ENST00000561003 TRAF5O00463 557 aa13.48□□□□□ -0.25
CSHL1-210ENST00000561003 GRAPQ13588 217 aa13.48□□□□□ -0.25
CSHL1-210ENST00000561003 NLRP10Q86W26 655 aa13.48□□□□□ -0.25
CSHL1-210ENST00000561003 GRAPLQ8TC17 118 aaPredicted RBP13.48□□□□□ -0.25
CSHL1-210ENST00000561003 CNOT7Q9UIV1 285 aaKnown RBP13.48□□□□□ -0.25
CSHL1-210ENST00000561003 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms