RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 PDE4AP27815 886 aa14.1□□□□□ -0.15
SNX1-212ENST00000560861 RABL6Q3YEC7 729 aaPredicted RBP14.1□□□□□ -0.15
SNX1-212ENST00000560861 HSP90AB3PQ58FF7 597 aa14.1□□□□□ -0.15
SNX1-212ENST00000560861 SLC27A3Q5K4L6 730 aa14.1□□□□□ -0.15
SNX1-212ENST00000560861 ZNF34Q8IZ26 560 aa14.1□□□□□ -0.15
SNX1-212ENST00000560861 HDAC5Q9UQL6 1122 aa14.1□□□□□ -0.15
SNX1-212ENST00000560861 A0A087WZG4 1122 aa14.09□□□□□ -0.15
SNX1-212ENST00000560861 NLRP10Q86W26 655 aa14.09□□□□□ -0.15
SNX1-212ENST00000560861 AMIGO3Q86WK7 504 aa14.09□□□□□ -0.15
SNX1-212ENST00000560861 PELP1Q8IZL8 1130 aaKnown RBP14.09□□□□□ -0.15
SNX1-212ENST00000560861 PROM2Q8N271 834 aa14.09□□□□□ -0.15
SNX1-212ENST00000560861 MYH3P11055 1940 aa14.08□□□□□ -0.16
SNX1-212ENST00000560861 PLSCR1O15162 318 aa14.08□□□□□ -0.16
SNX1-212ENST00000560861 PCCAP05165 728 aaPredicted RBP14.08□□□□□ -0.16
SNX1-212ENST00000560861 UBE3BQ7Z3V4 1068 aa14.08□□□□□ -0.16
SNX1-212ENST00000560861 CHD1LQ86WJ1 897 aa14.08□□□□□ -0.16
SNX1-212ENST00000560861 BICC1Q9H694 974 aaKnown RBP14.08□□□□□ -0.16
SNX1-212ENST00000560861 BCL2L12Q9HB09 334 aa14.08□□□□□ -0.16
SNX1-212ENST00000560861 NOP58Q9Y2X3 529 aaKnown RBP14.08□□□□□ -0.16
SNX1-212ENST00000560861 UBN2Q6ZU65 1347 aa14.08□□□□□ -0.16
SNX1-212ENST00000560861 CDHR2Q9BYE9 1310 aa14.08□□□□□ -0.16
SNX1-212ENST00000560861 TUBGCP6Q96RT7 1819 aa14.08□□□□□ -0.16
SNX1-212ENST00000560861 DDX60Q8IY21 1712 aaKnown RBP14.07□□□□□ -0.16
SNX1-212ENST00000560861 FOXO4P98177 505 aa14.07□□□□□ -0.16
SNX1-212ENST00000560861 JARID2Q92833 1246 aaPredicted RBP14.07□□□□□ -0.16
SNX1-212ENST00000560861 PLA2G12BQ9BX93 195 aa14.07□□□□□ -0.16
SNX1-212ENST00000560861 GNPATO15228 680 aa14.06□□□□□ -0.16
SNX1-212ENST00000560861 SRGAP3O43295 1099 aa14.06□□□□□ -0.16
SNX1-212ENST00000560861 RFX5P48382 616 aaPredicted RBP14.06□□□□□ -0.16
SNX1-212ENST00000560861 TXNRD1Q16881 649 aa14.06□□□□□ -0.16
SNX1-212ENST00000560861 CLEC4GQ6UXB4 293 aa14.06□□□□□ -0.16
SNX1-212ENST00000560861 NARFQ9UHQ1 456 aa14.06□□□□□ -0.16
SNX1-212ENST00000560861 GPTP24298 496 aa14.05□□□□□ -0.16
SNX1-212ENST00000560861 ANKRD45Q5TZF3 282 aa14.05□□□□□ -0.16
SNX1-212ENST00000560861 SMIM5Q71RC9 77 aa14.05□□□□□ -0.16
SNX1-212ENST00000560861 ZBTB38Q8NAP3 1195 aaPredicted RBP14.05□□□□□ -0.16
SNX1-212ENST00000560861 CASZ1Q86V15 1759 aa14.04□□□□□ -0.16
SNX1-212ENST00000560861 RGS3P49796 1198 aa14.04□□□□□ -0.16
SNX1-212ENST00000560861 NPM2Q86SE8 214 aaKnown RBP14.04□□□□□ -0.16
SNX1-212ENST00000560861 LNPKQ9C0E8 428 aa14.04□□□□□ -0.16
SNX1-212ENST00000560861 EXOC6BQ9Y2D4 811 aa14.04□□□□□ -0.16
SNX1-212ENST00000560861 RTCBQ9Y3I0 505 aaKnown RBP14.04□□□□□ -0.16
SNX1-212ENST00000560861 CACNB1Q02641 598 aaPredicted RBP14.03□□□□□ -0.16
SNX1-212ENST00000560861 PARP10Q53GL7 1025 aa14.03□□□□□ -0.16
SNX1-212ENST00000560861 SUSD4Q5VX71 490 aa14.03□□□□□ -0.16
SNX1-212ENST00000560861 ARXQ96QS3 562 aa14.03□□□□□ -0.16
SNX1-212ENST00000560861 COPRSQ9NQ92 184 aa14.03□□□□□ -0.16
SNX1-212ENST00000560861 SALL3Q9BXA9 1300 aa14.03□□□□□ -0.16
SNX1-212ENST00000560861 USP42Q9H9J4 1324 aaKnown RBP14.03□□□□□ -0.16
SNX1-212ENST00000560861 QSER1Q2KHR3 1735 aa14.02□□□□□ -0.16
SNX1-212ENST00000560861 LRP5O75197 1615 aa14.02□□□□□ -0.16
SNX1-212ENST00000560861 RAB11FIP3O75154 756 aa14.02□□□□□ -0.17
SNX1-212ENST00000560861 NTSR2O95665 410 aa14.02□□□□□ -0.17
SNX1-212ENST00000560861 APBA3O96018 575 aa14.02□□□□□ -0.17
SNX1-212ENST00000560861 CSF1RP07333 972 aa14.02□□□□□ -0.17
SNX1-212ENST00000560861 CCDC125Q86Z20 511 aa14.02□□□□□ -0.17
SNX1-212ENST00000560861 SYNE4Q8N205 404 aa14.02□□□□□ -0.17
SNX1-212ENST00000560861 ARHGEF1Q92888 912 aaKnown RBP14.02□□□□□ -0.17
SNX1-212ENST00000560861 AK7Q96M32 723 aa14.02□□□□□ -0.17
SNX1-212ENST00000560861 SRP68Q9UHB9 627 aaKnown RBP14.02□□□□□ -0.17
SNX1-212ENST00000560861 SMARCA5O60264 1052 aaPredicted RBP14.01□□□□□ -0.17
SNX1-212ENST00000560861 SURF6O75683 361 aaKnown RBP14.01□□□□□ -0.17
SNX1-212ENST00000560861 PTPN12Q05209 780 aaKnown RBP14.01□□□□□ -0.17
SNX1-212ENST00000560861 USPL1Q5W0Q7 1092 aa14.01□□□□□ -0.17
SNX1-212ENST00000560861 LMBR1LQ6UX01 489 aa14.01□□□□□ -0.17
SNX1-212ENST00000560861 AKT1S1Q96B36 256 aa14.01□□□□□ -0.17
SNX1-212ENST00000560861 FAM89AQ96GI7 184 aa14.01□□□□□ -0.17
SNX1-212ENST00000560861 TSHZ2Q9NRE2 1034 aa14.01□□□□□ -0.17
SNX1-212ENST00000560861 PA2G4Q9UQ80 394 aaKnown RBP14.01□□□□□ -0.17
SNX1-212ENST00000560861 ZNF652Q9Y2D9 606 aa14.01□□□□□ -0.17
SNX1-212ENST00000560861 HMGB2P26583 209 aaKnown RBP14□□□□□ -0.17
SNX1-212ENST00000560861 SSFA2P28290 1259 aa14□□□□□ -0.17
SNX1-212ENST00000560861 RTL5Q5HYW3 569 aaPredicted RBP14□□□□□ -0.17
SNX1-212ENST00000560861 PLEKHM2Q8IWE5 1019 aa14□□□□□ -0.17
SNX1-212ENST00000560861 RHPN1Q8TCX5 695 aa14□□□□□ -0.17
SNX1-212ENST00000560861 OTUD7AQ8TE49 926 aaPredicted RBP14□□□□□ -0.17
SNX1-212ENST00000560861 LRRCC1Q9C099 1032 aa14□□□□□ -0.17
SNX1-212ENST00000560861 NIP7Q9Y221 180 aaKnown RBP eCLIP14□□□□□ -0.17
SNX1-212ENST00000560861 SH3TC1Q8TE82 1336 aa13.99□□□□□ -0.17
SNX1-212ENST00000560861 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.99□□□□□ -0.17
SNX1-212ENST00000560861 ZNF827Q17R98 1081 aa13.99□□□□□ -0.17
SNX1-212ENST00000560861 HSP90AB4PQ58FF6 505 aa13.99□□□□□ -0.17
SNX1-212ENST00000560861 TRAPPC3LQ5T215 181 aa13.99□□□□□ -0.17
SNX1-212ENST00000560861 TBC1D9BQ66K14 1250 aa13.99□□□□□ -0.17
SNX1-212ENST00000560861 DEFB132Q7Z7B7 95 aa13.99□□□□□ -0.17
SNX1-212ENST00000560861 C16orf71Q8IYS4 520 aaPredicted RBP13.99□□□□□ -0.17
SNX1-212ENST00000560861 CAMKK2Q96RR4 588 aa13.99□□□□□ -0.17
SNX1-212ENST00000560861 UTP14AQ9BVJ6 771 aaKnown RBP13.99□□□□□ -0.17
SNX1-212ENST00000560861 TRMT112Q9UI30 125 aaKnown RBP13.99□□□□□ -0.17
SNX1-212ENST00000560861 IRS4O14654 1257 aaPredicted RBP13.98□□□□□ -0.17
SNX1-212ENST00000560861 SASH1O94885 1247 aa13.98□□□□□ -0.17
SNX1-212ENST00000560861 TTLL11Q8NHH1 800 aa13.98□□□□□ -0.17
SNX1-212ENST00000560861 KIF1BPQ96EK5 621 aa13.98□□□□□ -0.17
SNX1-212ENST00000560861 OSBPL3Q9H4L5 887 aa13.98□□□□□ -0.17
SNX1-212ENST00000560861 RTL9Q8NET4 1388 aa13.97□□□□□ -0.17
SNX1-212ENST00000560861 APBB1O00213 710 aa13.97□□□□□ -0.17
SNX1-212ENST00000560861 PDE8AO60658 829 aa13.97□□□□□ -0.17
SNX1-212ENST00000560861 ZPR1O75312 459 aa13.97□□□□□ -0.17
SNX1-212ENST00000560861 CTSWP56202 376 aa13.97□□□□□ -0.17
SNX1-212ENST00000560861 C8orf34Q49A92 452 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms