RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 RGL2O15211 777 aa13.36□□□□□ -0.27
TPM1-225ENST00000560679 ECE1P42892 770 aa13.36□□□□□ -0.27
TPM1-225ENST00000560679 TPTE2Q6XPS3 522 aa13.36□□□□□ -0.27
TPM1-225ENST00000560679 PAXIP1Q6ZW49 1069 aaPredicted RBP13.36□□□□□ -0.27
TPM1-225ENST00000560679 ALDH1B1P30837 517 aa13.35□□□□□ -0.27
TPM1-225ENST00000560679 CC2D1BQ5T0F9 858 aaKnown RBP13.35□□□□□ -0.27
TPM1-225ENST00000560679 JDP2Q8WYK2 163 aa13.35□□□□□ -0.27
TPM1-225ENST00000560679 MCOLN1Q9GZU1 580 aa13.35□□□□□ -0.27
TPM1-225ENST00000560679 PCDH10Q9P2E7 1040 aa13.35□□□□□ -0.27
TPM1-225ENST00000560679 CLSPNQ9HAW4 1339 aa13.35□□□□□ -0.27
TPM1-225ENST00000560679 CASP8AP2Q9UKL3 1982 aa13.34□□□□□ -0.27
TPM1-225ENST00000560679 NUP98P52948 1817 aa13.34□□□□□ -0.27
TPM1-225ENST00000560679 SNRPA1P09661 255 aaKnown RBP13.34□□□□□ -0.27
TPM1-225ENST00000560679 LMOD1P29536 600 aaPredicted RBP13.34□□□□□ -0.27
TPM1-225ENST00000560679 EIF6P56537 245 aaKnown RBP13.34□□□□□ -0.27
TPM1-225ENST00000560679 NUTM1Q86Y26 1132 aa13.34□□□□□ -0.27
TPM1-225ENST00000560679 BEGAINQ9BUH8 593 aa13.34□□□□□ -0.27
TPM1-225ENST00000560679 USP50Q70EL3 339 aaPredicted RBP13.33□□□□□ -0.28
TPM1-225ENST00000560679 SAPCD2Q86UD0 394 aa13.33□□□□□ -0.28
TPM1-225ENST00000560679 RSPH6AQ9H0K4 717 aa13.33□□□□□ -0.28
TPM1-225ENST00000560679 PDE4DIPQ5VU43 2346 aa13.32□□□□□ -0.28
TPM1-225ENST00000560679 HOXA10P31260 410 aaPredicted RBP13.32□□□□□ -0.28
TPM1-225ENST00000560679 PRKAR2BP31323 418 aa13.32□□□□□ -0.28
TPM1-225ENST00000560679 MAP2K2P36507 400 aa13.32□□□□□ -0.28
TPM1-225ENST00000560679 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
TPM1-225ENST00000560679 MCM10Q7L590 875 aa13.32□□□□□ -0.28
TPM1-225ENST00000560679 LARGE2Q8N3Y3 721 aa13.32□□□□□ -0.28
TPM1-225ENST00000560679 UBN2Q6ZU65 1347 aa13.32□□□□□ -0.28
TPM1-225ENST00000560679 KDM3BQ7LBC6 1761 aa13.32□□□□□ -0.28
TPM1-225ENST00000560679 IBTKQ9P2D0 1353 aaPredicted RBP13.32□□□□□ -0.28
TPM1-225ENST00000560679 ZEB1P37275 1124 aaPredicted RBP13.31□□□□□ -0.28
TPM1-225ENST00000560679 C3orf67Q6ZVT6 689 aa13.31□□□□□ -0.28
TPM1-225ENST00000560679 NPC1L1Q9UHC9 1359 aa13.31□□□□□ -0.28
TPM1-225ENST00000560679 CELF2O95319 508 aaKnown RBP13.3□□□□□ -0.28
TPM1-225ENST00000560679 BRPF1P55201 1214 aaPredicted RBP13.3□□□□□ -0.28
TPM1-225ENST00000560679 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
TPM1-225ENST00000560679 ADARB2Q9NS39 739 aaKnown RBP13.3□□□□□ -0.28
TPM1-225ENST00000560679 GPRC5DQ9NZD1 345 aa13.3□□□□□ -0.28
TPM1-225ENST00000560679 PPEF1O14829 653 aaPredicted RBP13.29□□□□□ -0.28
TPM1-225ENST00000560679 CA12O43570 354 aa13.29□□□□□ -0.28
TPM1-225ENST00000560679 GTF2E1P29083 439 aaPredicted RBP13.29□□□□□ -0.28
TPM1-225ENST00000560679 DCTN1Q14203 1278 aa13.29□□□□□ -0.28
TPM1-225ENST00000560679 AOC3Q16853 763 aa13.29□□□□□ -0.28
TPM1-225ENST00000560679 NIM1KQ8IY84 436 aa13.29□□□□□ -0.28
TPM1-225ENST00000560679 RPGRQ92834 1020 aaKnown RBP13.29□□□□□ -0.28
TPM1-225ENST00000560679 HHIPL1Q96JK4 782 aa13.29□□□□□ -0.28
TPM1-225ENST00000560679 GLIS2Q9BZE0 524 aaPredicted RBP13.29□□□□□ -0.28
TPM1-225ENST00000560679 NYXQ9GZU5 481 aa13.29□□□□□ -0.28
TPM1-225ENST00000560679 LAMB2P55268 1798 aa13.28□□□□□ -0.28
TPM1-225ENST00000560679 TCERG1O14776 1098 aaKnown RBP13.28□□□□□ -0.28
TPM1-225ENST00000560679 PPIP5K2O43314 1243 aa13.28□□□□□ -0.28
TPM1-225ENST00000560679 DGKZQ13574 1117 aa13.28□□□□□ -0.28
TPM1-225ENST00000560679 CIAPIN1Q6FI81 312 aa13.28□□□□□ -0.28
TPM1-225ENST00000560679 ZIC5Q96T25 663 aa13.28□□□□□ -0.28
TPM1-225ENST00000560679 MAP3K15Q6ZN16 1313 aa13.28□□□□□ -0.28
TPM1-225ENST00000560679 ERVV-1B6SEH8 477 aa13.27□□□□□ -0.29
TPM1-225ENST00000560679 NTSR2O95665 410 aa13.27□□□□□ -0.29
TPM1-225ENST00000560679 GPTP24298 496 aa13.27□□□□□ -0.29
TPM1-225ENST00000560679 GMPSP49915 693 aaPredicted RBP13.27□□□□□ -0.29
TPM1-225ENST00000560679 HIRAP54198 1017 aaPredicted RBP13.27□□□□□ -0.29
TPM1-225ENST00000560679 CXCL9Q07325 125 aa13.27□□□□□ -0.29
TPM1-225ENST00000560679 GRIPAP1Q4V328 841 aa13.27□□□□□ -0.29
TPM1-225ENST00000560679 TTLL7Q6ZT98 887 aa13.27□□□□□ -0.29
TPM1-225ENST00000560679 TRPM4Q8TD43 1214 aa13.27□□□□□ -0.29
TPM1-225ENST00000560679 CRAMP1Q96RY5 1269 aa13.27□□□□□ -0.29
TPM1-225ENST00000560679 PGAP2Q9UHJ9 254 aa13.27□□□□□ -0.29
TPM1-225ENST00000560679 DUOX1Q9NRD9 1551 aa13.27□□□□□ -0.29
TPM1-225ENST00000560679 CNGB1Q14028 1251 aaPredicted RBP13.26□□□□□ -0.29
TPM1-225ENST00000560679 SUSD4Q5VX71 490 aa13.26□□□□□ -0.29
TPM1-225ENST00000560679 NGEFQ8N5V2 710 aa13.26□□□□□ -0.29
TPM1-225ENST00000560679 DLG5Q8TDM6 1919 aa13.25□□□□□ -0.29
TPM1-225ENST00000560679 CDHR2Q9BYE9 1310 aa13.25□□□□□ -0.29
TPM1-225ENST00000560679 SHTN1A0MZ66 631 aa13.25□□□□□ -0.29
TPM1-225ENST00000560679 RTF1Q92541 710 aaKnown RBP13.25□□□□□ -0.29
TPM1-225ENST00000560679 RBM17Q96I25 401 aaKnown RBP13.25□□□□□ -0.29
TPM1-225ENST00000560679 ZBTB3Q9H5J0 574 aa13.25□□□□□ -0.29
TPM1-225ENST00000560679 ZNF408Q9H9D4 720 aa13.25□□□□□ -0.29
TPM1-225ENST00000560679 MIS18AQ9NYP9 233 aa13.25□□□□□ -0.29
TPM1-225ENST00000560679 ZNRF3Q9ULT6 936 aa13.25□□□□□ -0.29
TPM1-225ENST00000560679 ABCC4O15439 1325 aa13.24□□□□□ -0.29
TPM1-225ENST00000560679 DLK2Q6UY11 383 aa13.24□□□□□ -0.29
TPM1-225ENST00000560679 ZNF34Q8IZ26 560 aa13.24□□□□□ -0.29
TPM1-225ENST00000560679 RTFDC1Q9BY42 306 aaPredicted RBP13.24□□□□□ -0.29
TPM1-225ENST00000560679 ATP6V0A2Q9Y487 856 aa13.24□□□□□ -0.29
TPM1-225ENST00000560679 LRRC37AA6NMS7 1700 aa13.24□□□□□ -0.29
TPM1-225ENST00000560679 ANKRD36CQ5JPF3 1778 aa13.23□□□□□ -0.29
TPM1-225ENST00000560679 NOGQ13253 232 aa13.23□□□□□ -0.29
TPM1-225ENST00000560679 TAF7Q15545 349 aaPredicted RBP13.23□□□□□ -0.29
TPM1-225ENST00000560679 KIF6Q6ZMV9 814 aa13.23□□□□□ -0.29
TPM1-225ENST00000560679 YDJCA8MPS7 323 aa13.22□□□□□ -0.29
TPM1-225ENST00000560679 FAM155AB1AL88 458 aaPredicted RBP13.22□□□□□ -0.29
TPM1-225ENST00000560679 RAD17O75943 681 aa13.22□□□□□ -0.29
TPM1-225ENST00000560679 SOX10P56693 466 aa13.22□□□□□ -0.29
TPM1-225ENST00000560679 ZC3H15Q8WU90 426 aaKnown RBP13.22□□□□□ -0.29
TPM1-225ENST00000560679 VPS33BQ9H267 617 aa13.22□□□□□ -0.29
TPM1-225ENST00000560679 RRP7AQ9Y3A4 280 aaKnown RBP13.22□□□□□ -0.29
TPM1-225ENST00000560679 TAF1P21675 1872 aa13.21□□□□□ -0.29
TPM1-225ENST00000560679 HTATSF1O43719 755 aaKnown RBP13.21□□□□□ -0.29
TPM1-225ENST00000560679 U2AF1L5P0DN76 240 aaPredicted RBP13.21□□□□□ -0.29
TPM1-225ENST00000560679 MYL6BP14649 208 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms