RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 PXDNLA1KZ92 1463 aa9.28□□□□□ -0.92
IDH3A-220ENST00000560667 PSDA5PKW4 1024 aaPredicted RBP9.28□□□□□ -0.92
IDH3A-220ENST00000560667 SUSD4Q5VX71 490 aa9.28□□□□□ -0.92
IDH3A-220ENST00000560667 LMBR1LQ6UX01 489 aa9.28□□□□□ -0.92
IDH3A-220ENST00000560667 KIF6Q6ZMV9 814 aa9.28□□□□□ -0.92
IDH3A-220ENST00000560667 BICDL1Q6ZP65 573 aa9.28□□□□□ -0.92
IDH3A-220ENST00000560667 NLRP10Q86W26 655 aa9.28□□□□□ -0.92
IDH3A-220ENST00000560667 ZNF594Q96JF6 807 aaPredicted RBP9.28□□□□□ -0.92
IDH3A-220ENST00000560667 SIL1Q9H173 461 aa9.28□□□□□ -0.92
IDH3A-220ENST00000560667 CWC25Q9NXE8 425 aaPredicted RBP9.28□□□□□ -0.92
IDH3A-220ENST00000560667 ARFGEF2Q9Y6D5 1785 aa9.27□□□□□ -0.92
IDH3A-220ENST00000560667 GNPATO15228 680 aa9.27□□□□□ -0.93
IDH3A-220ENST00000560667 APBA3O96018 575 aa9.27□□□□□ -0.93
IDH3A-220ENST00000560667 EN1Q05925 392 aaPredicted RBP9.27□□□□□ -0.93
IDH3A-220ENST00000560667 ARHGEF1Q92888 912 aaKnown RBP9.27□□□□□ -0.93
IDH3A-220ENST00000560667 GCC1Q96CN9 775 aa9.27□□□□□ -0.93
IDH3A-220ENST00000560667 USPL1Q5W0Q7 1092 aa9.26□□□□□ -0.93
IDH3A-220ENST00000560667 NUTM1Q86Y26 1132 aa9.26□□□□□ -0.93
IDH3A-220ENST00000560667 PLEKHM2Q8IWE5 1019 aa9.26□□□□□ -0.93
IDH3A-220ENST00000560667 ZNF34Q8IZ26 560 aa9.26□□□□□ -0.93
IDH3A-220ENST00000560667 CCDC191Q8NCU4 936 aa9.26□□□□□ -0.93
IDH3A-220ENST00000560667 RBM19Q9Y4C8 960 aaKnown RBP9.26□□□□□ -0.93
IDH3A-220ENST00000560667 SASH1O94885 1247 aa9.26□□□□□ -0.93
IDH3A-220ENST00000560667 HCLS1P14317 486 aaPredicted RBP9.26□□□□□ -0.93
IDH3A-220ENST00000560667 RFX5P48382 616 aaPredicted RBP9.26□□□□□ -0.93
IDH3A-220ENST00000560667 C8orf34Q49A92 452 aa9.26□□□□□ -0.93
IDH3A-220ENST00000560667 TXNRD1Q16881 649 aa9.25□□□□□ -0.93
IDH3A-220ENST00000560667 TBC1D9BQ66K14 1250 aa9.25□□□□□ -0.93
IDH3A-220ENST00000560667 BACH2Q9BYV9 841 aa9.25□□□□□ -0.93
IDH3A-220ENST00000560667 PUS3Q9BZE2 481 aaKnown RBP9.25□□□□□ -0.93
IDH3A-220ENST00000560667 NUP188Q5SRE5 1749 aa9.25□□□□□ -0.93
IDH3A-220ENST00000560667 RPS6KA4O75676 772 aa9.25□□□□□ -0.93
IDH3A-220ENST00000560667 PTPN12Q05209 780 aaKnown RBP9.25□□□□□ -0.93
IDH3A-220ENST00000560667 TRIM28Q13263 835 aaKnown RBP9.25□□□□□ -0.93
IDH3A-220ENST00000560667 MTX1Q13505 466 aa9.25□□□□□ -0.93
IDH3A-220ENST00000560667 C3orf67Q6ZVT6 689 aa9.25□□□□□ -0.93
IDH3A-220ENST00000560667 TRMT112Q9UI30 125 aaKnown RBP9.25□□□□□ -0.93
IDH3A-220ENST00000560667 NIP7Q9Y221 180 aaKnown RBP eCLIP9.25□□□□□ -0.93
IDH3A-220ENST00000560667 CHMP3Q9Y3E7 222 aa9.25□□□□□ -0.93
IDH3A-220ENST00000560667 NHSQ6T4R5 1651 aa9.24□□□□□ -0.93
IDH3A-220ENST00000560667 COL15A1P39059 1388 aa9.24□□□□□ -0.93
IDH3A-220ENST00000560667 ERVV-1B6SEH8 477 aa9.24□□□□□ -0.93
IDH3A-220ENST00000560667 RABL6Q3YEC7 729 aaPredicted RBP9.24□□□□□ -0.93
IDH3A-220ENST00000560667 NPM2Q86SE8 214 aaKnown RBP9.24□□□□□ -0.93
IDH3A-220ENST00000560667 RHPN1Q8TCX5 695 aa9.24□□□□□ -0.93
IDH3A-220ENST00000560667 IBTKQ9P2D0 1353 aaPredicted RBP9.24□□□□□ -0.93
IDH3A-220ENST00000560667 NUP98P52948 1817 aa9.23□□□□□ -0.93
IDH3A-220ENST00000560667 AFDNP55196 1824 aaKnown RBP9.23□□□□□ -0.93
IDH3A-220ENST00000560667 HMMRO75330 724 aa9.23□□□□□ -0.93
IDH3A-220ENST00000560667 GSPT1P15170 499 aaKnown RBP9.23□□□□□ -0.93
IDH3A-220ENST00000560667 R3HDM1Q15032 1099 aaKnown RBP9.23□□□□□ -0.93
IDH3A-220ENST00000560667 ZNF827Q17R98 1081 aa9.23□□□□□ -0.93
IDH3A-220ENST00000560667 LRRC24Q50LG9 513 aa9.23□□□□□ -0.93
IDH3A-220ENST00000560667 SLC51AQ86UW1 340 aa9.23□□□□□ -0.93
IDH3A-220ENST00000560667 ZBTB38Q8NAP3 1195 aaPredicted RBP9.23□□□□□ -0.93
IDH3A-220ENST00000560667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.23□□□□□ -0.93
IDH3A-220ENST00000560667 RC3H1Q5TC82 1133 aaKnown RBP9.23□□□□□ -0.93
IDH3A-220ENST00000560667 LRRCC1Q9C099 1032 aa9.23□□□□□ -0.93
IDH3A-220ENST00000560667 NOP58Q9Y2X3 529 aaKnown RBP9.23□□□□□ -0.93
IDH3A-220ENST00000560667 RTCBQ9Y3I0 505 aaKnown RBP9.23□□□□□ -0.93
IDH3A-220ENST00000560667 N4BP2Q86UW6 1770 aaPredicted RBP9.23□□□□□ -0.93
IDH3A-220ENST00000560667 CNTNAP4Q9C0A0 1308 aa9.23□□□□□ -0.93
IDH3A-220ENST00000560667 COL5A3P25940 1745 aaPredicted RBP9.22□□□□□ -0.93
IDH3A-220ENST00000560667 WTIPA6NIX2 430 aaPredicted RBP9.22□□□□□ -0.93
IDH3A-220ENST00000560667 IRS4O14654 1257 aaPredicted RBP9.22□□□□□ -0.93
IDH3A-220ENST00000560667 MAP4K4O95819 1239 aaPredicted RBP9.22□□□□□ -0.93
IDH3A-220ENST00000560667 PCCAP05165 728 aaPredicted RBP9.22□□□□□ -0.93
IDH3A-220ENST00000560667 EZH2Q15910 746 aaKnown RBP9.22□□□□□ -0.93
IDH3A-220ENST00000560667 FAM161AQ3B820 660 aa9.22□□□□□ -0.93
IDH3A-220ENST00000560667 TRAPPC3LQ5T215 181 aa9.22□□□□□ -0.93
IDH3A-220ENST00000560667 TTLL11Q8NHH1 800 aa9.22□□□□□ -0.93
IDH3A-220ENST00000560667 EAF2Q96CJ1 260 aaPredicted RBP9.22□□□□□ -0.93
IDH3A-220ENST00000560667 PDGFDQ9GZP0 370 aaPredicted RBP9.22□□□□□ -0.93
IDH3A-220ENST00000560667 CCDC8Q9H0W5 538 aaPredicted RBP9.22□□□□□ -0.93
IDH3A-220ENST00000560667 GREM2Q9H772 168 aa9.22□□□□□ -0.93
IDH3A-220ENST00000560667 TLR7Q9NYK1 1049 aaKnown RBP9.22□□□□□ -0.93
IDH3A-220ENST00000560667 ERFEQ4G0M1 354 aa9.22□□□□□ -0.93
IDH3A-220ENST00000560667 ATG9AQ7Z3C6 839 aa9.22□□□□□ -0.93
IDH3A-220ENST00000560667 SEC31BQ9NQW1 1179 aa9.22□□□□□ -0.93
IDH3A-220ENST00000560667 NARFQ9UHQ1 456 aa9.22□□□□□ -0.93
IDH3A-220ENST00000560667 SALL3Q9BXA9 1300 aa9.21□□□□□ -0.93
IDH3A-220ENST00000560667 SNAP23O00161 211 aa9.21□□□□□ -0.94
IDH3A-220ENST00000560667 CSF1RP07333 972 aa9.21□□□□□ -0.94
IDH3A-220ENST00000560667 TFCP2Q12800 502 aa9.21□□□□□ -0.94
IDH3A-220ENST00000560667 AK7Q96M32 723 aa9.21□□□□□ -0.94
IDH3A-220ENST00000560667 NDUFB9Q9Y6M9 179 aa9.21□□□□□ -0.94
IDH3A-220ENST00000560667 LY75O60449 1722 aa9.21□□□□□ -0.94
IDH3A-220ENST00000560667 NTSR2O95665 410 aa9.2□□□□□ -0.94
IDH3A-220ENST00000560667 RFC4P35249 363 aa9.2□□□□□ -0.94
IDH3A-220ENST00000560667 PDE1AP54750 535 aa9.2□□□□□ -0.94
IDH3A-220ENST00000560667 TIMM10P62072 90 aa9.2□□□□□ -0.94
IDH3A-220ENST00000560667 OS9Q13438 667 aaPredicted RBP9.2□□□□□ -0.94
IDH3A-220ENST00000560667 CAMKK2Q96RR4 588 aa9.2□□□□□ -0.94
IDH3A-220ENST00000560667 PLSCR1O15162 318 aa9.2□□□□□ -0.94
IDH3A-220ENST00000560667 ZPR1O75312 459 aa9.2□□□□□ -0.94
IDH3A-220ENST00000560667 G3BP1Q13283 466 aaKnown RBP eCLIP9.2□□□□□ -0.94
IDH3A-220ENST00000560667 UTP14AQ9BVJ6 771 aaKnown RBP9.2□□□□□ -0.94
IDH3A-220ENST00000560667 COPRSQ9NQ92 184 aa9.2□□□□□ -0.94
IDH3A-220ENST00000560667 TAF1LQ8IZX4 1826 aa9.2□□□□□ -0.94
IDH3A-220ENST00000560667 COL4A1P02462 1669 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms