RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 DNAAF4Q8WXU2 420 aa29.52■■■□□ 2.32
SHF-207ENST00000560540 SPATA31A1Q5TZJ5 1347 aa29.52■■■□□ 2.32
SHF-207ENST00000560540 MAP4K4O95819 1239 aaPredicted RBP29.51■■■□□ 2.31
SHF-207ENST00000560540 MEX3CQ5U5Q3 659 aaKnown RBP29.51■■■□□ 2.31
SHF-207ENST00000560540 ZCRB1Q8TBF4 217 aaKnown RBP29.51■■■□□ 2.31
SHF-207ENST00000560540 PLEKHG2Q9H7P9 1386 aa29.5■■■□□ 2.31
SHF-207ENST00000560540 GLRX3O76003 335 aaKnown RBP29.5■■■□□ 2.31
SHF-207ENST00000560540 NBPF7P0C2Y1 421 aaPredicted RBP29.5■■■□□ 2.31
SHF-207ENST00000560540 MTX1Q13505 466 aa29.5■■■□□ 2.31
SHF-207ENST00000560540 DISP2A7MBM2 1401 aa29.5■■■□□ 2.31
SHF-207ENST00000560540 RUFY3Q7L099 469 aa29.49■■■□□ 2.31
SHF-207ENST00000560540 CCDC9Q9Y3X0 531 aaKnown RBP29.49■■■□□ 2.31
SHF-207ENST00000560540 ATP6V1DQ9Y5K8 247 aa29.49■■■□□ 2.31
SHF-207ENST00000560540 STX6O43752 255 aa29.49■■■□□ 2.31
SHF-207ENST00000560540 UBE2HP62256 183 aa29.49■■■□□ 2.31
SHF-207ENST00000560540 RASEFQ8IZ41 740 aa29.49■■■□□ 2.31
SHF-207ENST00000560540 SPATA31A5Q5VU36 1347 aa29.49■■■□□ 2.31
SHF-207ENST00000560540 SPATA31A7Q8IWB4 1347 aa29.49■■■□□ 2.31
SHF-207ENST00000560540 RNMTO43148 476 aaKnown RBP29.48■■■□□ 2.31
SHF-207ENST00000560540 IFNL2Q8IZJ0 200 aa29.48■■■□□ 2.31
SHF-207ENST00000560540 RUFY2Q8WXA3 655 aa29.48■■■□□ 2.31
SHF-207ENST00000560540 CHPF2Q9P2E5 772 aa29.48■■■□□ 2.31
SHF-207ENST00000560540 PTMAP06454 111 aaKnown RBP29.47■■■□□ 2.31
SHF-207ENST00000560540 FOXD4L6Q3SYB3 417 aaPredicted RBP29.47■■■□□ 2.31
SHF-207ENST00000560540 FOXD4L3Q6VB84 417 aaPredicted RBP29.47■■■□□ 2.31
SHF-207ENST00000560540 F13A1P00488 732 aa29.46■■■□□ 2.31
SHF-207ENST00000560540 SYT1P21579 422 aa29.46■■■□□ 2.31
SHF-207ENST00000560540 USP21Q9UK80 565 aa29.46■■■□□ 2.31
SHF-207ENST00000560540 SMC3Q9UQE7 1217 aa29.46■■■□□ 2.31
SHF-207ENST00000560540 CNPY2Q9Y2B0 182 aa29.46■■■□□ 2.31
SHF-207ENST00000560540 KDM6AO15550 1401 aaPredicted RBP29.46■■■□□ 2.31
SHF-207ENST00000560540 SHANK3Q9BYB0 1731 aa29.46■■■□□ 2.31
SHF-207ENST00000560540 ADCY9O60503 1353 aa29.46■■■□□ 2.31
SHF-207ENST00000560540 MAP7D2Q96T17 732 aa29.46■■■□□ 2.31
SHF-207ENST00000560540 PI4KAP2A4QPH2 592 aa29.45■■■□□ 2.31
SHF-207ENST00000560540 EIF2S2P20042 333 aaKnown RBP29.45■■■□□ 2.31
SHF-207ENST00000560540 KIAA2012Q0VF49 1180 aa29.45■■■□□ 2.31
SHF-207ENST00000560540 CWC27Q6UX04 472 aaKnown RBP29.45■■■□□ 2.31
SHF-207ENST00000560540 PI4KAP1Q8N8J0 262 aa29.45■■■□□ 2.31
SHF-207ENST00000560540 DDX54Q8TDD1 881 aaKnown RBP29.45■■■□□ 2.31
SHF-207ENST00000560540 PCDH11XQ9BZA7 1347 aa29.45■■■□□ 2.3
SHF-207ENST00000560540 PCDH11YQ9BZA8 1340 aa29.45■■■□□ 2.3
SHF-207ENST00000560540 KCNB2Q92953 911 aa29.44■■■□□ 2.3
SHF-207ENST00000560540 TM6SF1Q9BZW5 370 aa29.44■■■□□ 2.3
SHF-207ENST00000560540 UQCRHLA0A096LP55 91 aa29.44■■■□□ 2.3
SHF-207ENST00000560540 UQCRHP07919 91 aa29.44■■■□□ 2.3
SHF-207ENST00000560540 SASS6Q6UVJ0 657 aa29.44■■■□□ 2.3
SHF-207ENST00000560540 DIAPH3Q9NSV4 1193 aa29.44■■■□□ 2.3
SHF-207ENST00000560540 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.44■■■□□ 2.3
SHF-207ENST00000560540 ADAMTS7Q9UKP4 1686 aa29.43■■■□□ 2.3
SHF-207ENST00000560540 VPS72Q15906 364 aa29.43■■■□□ 2.3
SHF-207ENST00000560540 VPS53Q5VIR6 699 aa29.43■■■□□ 2.3
SHF-207ENST00000560540 HYPKQ9NX55 129 aa29.43■■■□□ 2.3
SHF-207ENST00000560540 WNK3Q9BYP7 1800 aa29.42■■■□□ 2.3
SHF-207ENST00000560540 AFF2P51816 1311 aa29.42■■■□□ 2.3
SHF-207ENST00000560540 CASTP20810 708 aaKnown RBP29.42■■■□□ 2.3
SHF-207ENST00000560540 CLASRPQ8N2M8 674 aaKnown RBP29.42■■■□□ 2.3
SHF-207ENST00000560540 ZSCAN31Q96LW9 406 aaPredicted RBP29.42■■■□□ 2.3
SHF-207ENST00000560540 SH2B1Q9NRF2 756 aaPredicted RBP29.42■■■□□ 2.3
SHF-207ENST00000560540 DYNC1I1O14576 645 aa29.41■■■□□ 2.3
SHF-207ENST00000560540 TEFQ10587 303 aa29.41■■■□□ 2.3
SHF-207ENST00000560540 ERC1Q8IUD2 1116 aa29.41■■■□□ 2.3
SHF-207ENST00000560540 GPATCH3Q96I76 525 aa29.41■■■□□ 2.3
SHF-207ENST00000560540 THRAP3Q9Y2W1 955 aaKnown RBP29.41■■■□□ 2.3
SHF-207ENST00000560540 ALDH1L1O75891 902 aa29.4■■■□□ 2.3
SHF-207ENST00000560540 OS9Q13438 667 aaPredicted RBP29.4■■■□□ 2.3
SHF-207ENST00000560540 ECHDC1Q9NTX5 307 aa29.4■■■□□ 2.3
SHF-207ENST00000560540 HDAC5Q9UQL6 1122 aa29.4■■■□□ 2.3
SHF-207ENST00000560540 SCN11AQ9UI33 1791 aa29.4■■■□□ 2.3
SHF-207ENST00000560540 DCAF5Q96JK2 942 aa29.39■■■□□ 2.3
SHF-207ENST00000560540 ZSWIM6Q9HCJ5 1215 aa29.39■■■□□ 2.3
SHF-207ENST00000560540 PDRG1Q9NUG6 133 aa29.38■■■□□ 2.29
SHF-207ENST00000560540 DBF4Q9UBU7 674 aaPredicted RBP29.38■■■□□ 2.29
SHF-207ENST00000560540 LARGE1O95461 756 aa29.37■■■□□ 2.29
SHF-207ENST00000560540 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.37■■■□□ 2.29
SHF-207ENST00000560540 FAM98CQ17RN3 349 aaKnown RBP29.36■■■□□ 2.29
SHF-207ENST00000560540 USP25Q9UHP3 1055 aa29.36■■■□□ 2.29
SHF-207ENST00000560540 CYP46A1Q9Y6A2 500 aa29.36■■■□□ 2.29
SHF-207ENST00000560540 SIPA1L3O60292 1781 aaPredicted RBP29.36■■■□□ 2.29
SHF-207ENST00000560540 PDIA4P13667 645 aaKnown RBP29.36■■■□□ 2.29
SHF-207ENST00000560540 GJB2P29033 226 aa29.36■■■□□ 2.29
SHF-207ENST00000560540 BARGINQ6ZT62 677 aa29.36■■■□□ 2.29
SHF-207ENST00000560540 EVI5LQ96CN4 794 aa29.36■■■□□ 2.29
SHF-207ENST00000560540 JAKMIP1Q96N16 626 aaKnown RBP29.36■■■□□ 2.29
SHF-207ENST00000560540 FUCA2Q9BTY2 467 aa29.36■■■□□ 2.29
SHF-207ENST00000560540 MTMR6Q9Y217 621 aa29.36■■■□□ 2.29
SHF-207ENST00000560540 EXOC5O00471 708 aa29.35■■■□□ 2.29
SHF-207ENST00000560540 KCNQ3O43525 872 aa29.35■■■□□ 2.29
SHF-207ENST00000560540 PTH1RQ03431 593 aa29.35■■■□□ 2.29
SHF-207ENST00000560540 MTERF4Q7Z6M4 381 aaKnown RBP29.35■■■□□ 2.29
SHF-207ENST00000560540 BTBD11A6QL63 1104 aa29.35■■■□□ 2.29
SHF-207ENST00000560540 FIBPO43427 364 aa29.35■■■□□ 2.29
SHF-207ENST00000560540 NFATC2IPQ8NCF5 419 aa29.35■■■□□ 2.29
SHF-207ENST00000560540 PIBF1Q8WXW3 757 aa29.35■■■□□ 2.29
SHF-207ENST00000560540 SLC52A2Q9HAB3 445 aa29.35■■■□□ 2.29
SHF-207ENST00000560540 CCDC171Q6TFL3 1326 aa29.34■■■□□ 2.29
SHF-207ENST00000560540 HCLS1P14317 486 aaPredicted RBP29.34■■■□□ 2.29
SHF-207ENST00000560540 NKX1-1Q15270 411 aaPredicted RBP29.34■■■□□ 2.29
SHF-207ENST00000560540 CCDC83Q8IWF9 413 aa29.34■■■□□ 2.29
SHF-207ENST00000560540 ADCY5O95622 1261 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms