RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 TIMELESSQ9UNS1 1208 aa12.1□□□□□ -0.47
RABGGTA-217ENST00000560521 ZNF652Q9Y2D9 606 aa12.1□□□□□ -0.47
RABGGTA-217ENST00000560521 TAF1P21675 1872 aa12.1□□□□□ -0.47
RABGGTA-217ENST00000560521 DLG5Q8TDM6 1919 aa12.09□□□□□ -0.47
RABGGTA-217ENST00000560521 NBPF26B4DH59 902 aa12.09□□□□□ -0.47
RABGGTA-217ENST00000560521 HLFQ16534 295 aa12.09□□□□□ -0.47
RABGGTA-217ENST00000560521 NBPF10Q6P3W6 841 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-217ENST00000560521 SAPCD2Q86UD0 394 aa12.09□□□□□ -0.47
RABGGTA-217ENST00000560521 NBPF15Q8N660 670 aa12.09□□□□□ -0.47
RABGGTA-217ENST00000560521 GAS2L2Q8NHY3 880 aa12.09□□□□□ -0.47
RABGGTA-217ENST00000560521 LAMB2P55268 1798 aa12.09□□□□□ -0.47
RABGGTA-217ENST00000560521 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.47
RABGGTA-217ENST00000560521 DGKZQ13574 1117 aa12.08□□□□□ -0.48
RABGGTA-217ENST00000560521 CRY2Q49AN0 593 aa12.08□□□□□ -0.48
RABGGTA-217ENST00000560521 SLC51AQ86UW1 340 aa12.08□□□□□ -0.48
RABGGTA-217ENST00000560521 RGL2O15211 777 aa12.07□□□□□ -0.48
RABGGTA-217ENST00000560521 CA12O43570 354 aa12.07□□□□□ -0.48
RABGGTA-217ENST00000560521 CC2D2BQ6DHV5 1058 aa12.07□□□□□ -0.48
RABGGTA-217ENST00000560521 LARGE2Q8N3Y3 721 aa12.07□□□□□ -0.48
RABGGTA-217ENST00000560521 ANKRD36CQ5JPF3 1778 aa12.06□□□□□ -0.48
RABGGTA-217ENST00000560521 CELF2O95319 508 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-217ENST00000560521 SNRPA1P09661 255 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-217ENST00000560521 GTF2E1P29083 439 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-217ENST00000560521 BRPF1P55201 1214 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-217ENST00000560521 CIAPIN1Q6FI81 312 aa12.06□□□□□ -0.48
RABGGTA-217ENST00000560521 NUTM1Q86Y26 1132 aa12.06□□□□□ -0.48
RABGGTA-217ENST00000560521 HHIPL1Q96JK4 782 aa12.06□□□□□ -0.48
RABGGTA-217ENST00000560521 PHACTR3Q96KR7 559 aa12.06□□□□□ -0.48
RABGGTA-217ENST00000560521 ZIC5Q96T25 663 aa12.06□□□□□ -0.48
RABGGTA-217ENST00000560521 ABCC12Q96J65 1359 aa12.05□□□□□ -0.48
RABGGTA-217ENST00000560521 U2SURPO15042 1029 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-217ENST00000560521 PER1O15534 1290 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-217ENST00000560521 HOXA10P31260 410 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-217ENST00000560521 GLIS2Q9BZE0 524 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-217ENST00000560521 ADARB2Q9NS39 739 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-217ENST00000560521 GPRC5DQ9NZD1 345 aa12.05□□□□□ -0.48
RABGGTA-217ENST00000560521 PGAP2Q9UHJ9 254 aa12.05□□□□□ -0.48
RABGGTA-217ENST00000560521 GRIPAP1Q4V328 841 aa12.04□□□□□ -0.48
RABGGTA-217ENST00000560521 CC2D1BQ5T0F9 858 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-217ENST00000560521 KDM3BQ7LBC6 1761 aa12.04□□□□□ -0.48
RABGGTA-217ENST00000560521 TCERG1O14776 1098 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-217ENST00000560521 HIRAP54198 1017 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-217ENST00000560521 CXCL9Q07325 125 aa12.03□□□□□ -0.48
RABGGTA-217ENST00000560521 NIM1KQ8IY84 436 aa12.03□□□□□ -0.48
RABGGTA-217ENST00000560521 RPGRQ92834 1020 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-217ENST00000560521 RIC1Q4ADV7 1423 aa12.03□□□□□ -0.48
RABGGTA-217ENST00000560521 PPIP5K2O43314 1243 aa12.02□□□□□ -0.49
RABGGTA-217ENST00000560521 AOC3Q16853 763 aa12.02□□□□□ -0.49
RABGGTA-217ENST00000560521 CRAMP1Q96RY5 1269 aa12.02□□□□□ -0.49
RABGGTA-217ENST00000560521 NYXQ9GZU5 481 aa12.02□□□□□ -0.49
RABGGTA-217ENST00000560521 KIF7Q2M1P5 1343 aa12.02□□□□□ -0.49
RABGGTA-217ENST00000560521 NPC1L1Q9UHC9 1359 aa12.02□□□□□ -0.49
RABGGTA-217ENST00000560521 PPEF1O14829 653 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-217ENST00000560521 GMPSP49915 693 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-217ENST00000560521 SOX10P56693 466 aa12.01□□□□□ -0.49
RABGGTA-217ENST00000560521 MCM10Q7L590 875 aa12.01□□□□□ -0.49
RABGGTA-217ENST00000560521 RBM17Q96I25 401 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-217ENST00000560521 ZNF408Q9H9D4 720 aa12.01□□□□□ -0.49
RABGGTA-217ENST00000560521 ERVV-1B6SEH8 477 aa12□□□□□ -0.49
RABGGTA-217ENST00000560521 PRKAR2BP31323 418 aa12□□□□□ -0.49
RABGGTA-217ENST00000560521 NOGQ13253 232 aa12□□□□□ -0.49
RABGGTA-217ENST00000560521 SUSD4Q5VX71 490 aa12□□□□□ -0.49
RABGGTA-217ENST00000560521 DLK2Q6UY11 383 aa12□□□□□ -0.49
RABGGTA-217ENST00000560521 C3orf67Q6ZVT6 689 aa12□□□□□ -0.49
RABGGTA-217ENST00000560521 CDC37L1Q7L3B6 337 aa12□□□□□ -0.49
RABGGTA-217ENST00000560521 NGEFQ8N5V2 710 aa12□□□□□ -0.49
RABGGTA-217ENST00000560521 ZC3H15Q8WU90 426 aaKnown RBP12□□□□□ -0.49
RABGGTA-217ENST00000560521 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
RABGGTA-217ENST00000560521 VPS33BQ9H267 617 aa12□□□□□ -0.49
RABGGTA-217ENST00000560521 ZNRF3Q9ULT6 936 aa12□□□□□ -0.49
RABGGTA-217ENST00000560521 UBN2Q6ZU65 1347 aa12□□□□□ -0.49
RABGGTA-217ENST00000560521 SHTN1A0MZ66 631 aa11.99□□□□□ -0.49
RABGGTA-217ENST00000560521 FAM155AB1AL88 458 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-217ENST00000560521 GPTP24298 496 aa11.99□□□□□ -0.49
RABGGTA-217ENST00000560521 DCTN1Q14203 1278 aa11.99□□□□□ -0.49
RABGGTA-217ENST00000560521 TTLL7Q6ZT98 887 aa11.99□□□□□ -0.49
RABGGTA-217ENST00000560521 TRPM4Q8TD43 1214 aa11.99□□□□□ -0.49
RABGGTA-217ENST00000560521 ATP6V0A2Q9Y487 856 aa11.99□□□□□ -0.49
RABGGTA-217ENST00000560521 MAP3K15Q6ZN16 1313 aa11.99□□□□□ -0.49
RABGGTA-217ENST00000560521 IBTKQ9P2D0 1353 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-217ENST00000560521 HUNKP57058 714 aa11.98□□□□□ -0.49
RABGGTA-217ENST00000560521 USP48Q86UV5 1035 aa11.98□□□□□ -0.49
RABGGTA-217ENST00000560521 ZNF34Q8IZ26 560 aa11.98□□□□□ -0.49
RABGGTA-217ENST00000560521 RTFDC1Q9BY42 306 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-217ENST00000560521 MIS18AQ9NYP9 233 aa11.98□□□□□ -0.49
RABGGTA-217ENST00000560521 SCN9AQ15858 1988 aa11.98□□□□□ -0.49
RABGGTA-217ENST00000560521 RAD17O75943 681 aa11.97□□□□□ -0.49
RABGGTA-217ENST00000560521 NTSR2O95665 410 aa11.97□□□□□ -0.49
RABGGTA-217ENST00000560521 RTF1Q92541 710 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-217ENST00000560521 BCL2L13Q9BXK5 485 aa11.97□□□□□ -0.49
RABGGTA-217ENST00000560521 CNOT7Q9UIV1 285 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-217ENST00000560521 CDHR2Q9BYE9 1310 aa11.96□□□□□ -0.49
RABGGTA-217ENST00000560521 TRPA1O75762 1119 aa11.96□□□□□ -0.49
RABGGTA-217ENST00000560521 KIF23Q02241 960 aaPredicted RBP11.96□□□□□ -0.49
RABGGTA-217ENST00000560521 CNGB1Q14028 1251 aaPredicted RBP11.96□□□□□ -0.49
RABGGTA-217ENST00000560521 TAF7Q15545 349 aaPredicted RBP11.96□□□□□ -0.49
RABGGTA-217ENST00000560521 PRPF38BQ5VTL8 546 aaKnown RBP11.96□□□□□ -0.49
RABGGTA-217ENST00000560521 RGMBQ6NW40 437 aa11.96□□□□□ -0.49
RABGGTA-217ENST00000560521 SUPT20HQ8NEM7 779 aa11.96□□□□□ -0.49
RABGGTA-217ENST00000560521 RNF186Q9NXI6 227 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms