RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ASXL1Q8IXJ9 1541 aa15.59■□□□□ 0.09
TRAF3-208ENST00000560371 NBPF14Q5TI25 921 aa15.59■□□□□ 0.09
TRAF3-208ENST00000560371 CENPHQ9H3R5 247 aa15.59■□□□□ 0.09
TRAF3-208ENST00000560371 ARHGAP29Q52LW3 1261 aa15.58■□□□□ 0.09
TRAF3-208ENST00000560371 F8W031 263 aaPredicted RBP15.58■□□□□ 0.09
TRAF3-208ENST00000560371 POLD1P28340 1107 aa15.58■□□□□ 0.09
TRAF3-208ENST00000560371 JAKMIP3Q5VZ66 844 aa15.58■□□□□ 0.09
TRAF3-208ENST00000560371 NCOA7Q8NI08 942 aa15.58■□□□□ 0.09
TRAF3-208ENST00000560371 ATP2B3Q16720 1220 aa15.58■□□□□ 0.08
TRAF3-208ENST00000560371 TAF4BQ92750 862 aa15.58■□□□□ 0.08
TRAF3-208ENST00000560371 USP16Q9Y5T5 823 aa15.58■□□□□ 0.08
TRAF3-208ENST00000560371 CETN1Q12798 172 aa15.58■□□□□ 0.08
TRAF3-208ENST00000560371 CNNM3Q8NE01 707 aa15.58■□□□□ 0.08
TRAF3-208ENST00000560371 GRM1Q13255 1194 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 DHX37Q8IY37 1157 aaKnown RBP15.57■□□□□ 0.08
TRAF3-208ENST00000560371 RALGAPBQ86X10 1494 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 TSPOAP1O95153 1857 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 PLEKHH1Q9ULM0 1364 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 TSPY3P0CV98 308 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 TSPY8P0CW00 308 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 CCDC191Q8NCU4 936 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 WDR70Q9NW82 654 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 NCKAP5LQ9HCH0 1330 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 MCM4P33991 863 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 ANO10Q9NW15 660 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 UBA7P41226 1012 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 METAP2P50579 478 aaKnown RBP eCLIP15.57■□□□□ 0.08
TRAF3-208ENST00000560371 ENOX2Q16206 610 aaKnown RBP15.57■□□□□ 0.08
TRAF3-208ENST00000560371 IQSEC3Q9UPP2 1182 aaPredicted RBP15.57■□□□□ 0.08
TRAF3-208ENST00000560371 LIG1P18858 919 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 CYP7A1P22680 504 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 GBP2P32456 591 aaPredicted RBP15.57■□□□□ 0.08
TRAF3-208ENST00000560371 SPA17Q15506 151 aa15.57■□□□□ 0.08
TRAF3-208ENST00000560371 DZIP3Q86Y13 1208 aaKnown RBP15.57■□□□□ 0.08
TRAF3-208ENST00000560371 AMPD3Q01432 767 aa15.56■□□□□ 0.08
TRAF3-208ENST00000560371 ZFYP08048 801 aaPredicted RBP15.56■□□□□ 0.08
TRAF3-208ENST00000560371 MCM5P33992 734 aa15.56■□□□□ 0.08
TRAF3-208ENST00000560371 DRC1Q96MC2 740 aa15.56■□□□□ 0.08
TRAF3-208ENST00000560371 UTP14AQ9BVJ6 771 aaKnown RBP15.56■□□□□ 0.08
TRAF3-208ENST00000560371 ABCC10Q5T3U5 1492 aa15.56■□□□□ 0.08
TRAF3-208ENST00000560371 EIF2AK4Q9P2K8 1649 aaKnown RBP15.56■□□□□ 0.08
TRAF3-208ENST00000560371 MTERF4Q7Z6M4 381 aaKnown RBP15.56■□□□□ 0.08
TRAF3-208ENST00000560371 NEK1Q96PY6 1258 aa15.56■□□□□ 0.08
TRAF3-208ENST00000560371 PARP3Q9Y6F1 533 aa15.56■□□□□ 0.08
TRAF3-208ENST00000560371 PPP4R3BQ5MIZ7 849 aa15.56■□□□□ 0.08
TRAF3-208ENST00000560371 HMG20BQ9P0W2 317 aa15.56■□□□□ 0.08
TRAF3-208ENST00000560371 TRAF1Q13077 416 aa15.55■□□□□ 0.08
TRAF3-208ENST00000560371 ZNF804AQ7Z570 1209 aa15.55■□□□□ 0.08
TRAF3-208ENST00000560371 CCDC112Q8NEF3 446 aa15.55■□□□□ 0.08
TRAF3-208ENST00000560371 JDP2Q8WYK2 163 aa15.55■□□□□ 0.08
TRAF3-208ENST00000560371 LARP6Q9BRS8 491 aaKnown RBP15.55■□□□□ 0.08
TRAF3-208ENST00000560371 ANAPC15P60006 121 aa15.55■□□□□ 0.08
TRAF3-208ENST00000560371 NAA16Q6N069 864 aaPredicted RBP15.55■□□□□ 0.08
TRAF3-208ENST00000560371 C16orf71Q8IYS4 520 aaPredicted RBP15.55■□□□□ 0.08
TRAF3-208ENST00000560371 SYCE3A1L190 88 aa15.55■□□□□ 0.08
TRAF3-208ENST00000560371 GCP02774 474 aa15.55■□□□□ 0.08
TRAF3-208ENST00000560371 GRPEL1Q9HAV7 217 aa15.55■□□□□ 0.08
TRAF3-208ENST00000560371 TAX1BP1Q86VP1 789 aa15.55■□□□□ 0.08
TRAF3-208ENST00000560371 SYCP3Q8IZU3 236 aa15.55■□□□□ 0.08
TRAF3-208ENST00000560371 ABCC1P33527 1531 aa15.54■□□□□ 0.08
TRAF3-208ENST00000560371 WTAPQ15007 396 aa15.54■□□□□ 0.08
TRAF3-208ENST00000560371 IFIT1BQ5T764 474 aaKnown RBP15.54■□□□□ 0.08
TRAF3-208ENST00000560371 STXBP4Q6ZWJ1 553 aa15.54■□□□□ 0.08
TRAF3-208ENST00000560371 NSFL1CQ9UNZ2 370 aaKnown RBP15.54■□□□□ 0.08
TRAF3-208ENST00000560371 LMBR1LQ6UX01 489 aa15.54■□□□□ 0.08
TRAF3-208ENST00000560371 WWC3Q9ULE0 1092 aa15.54■□□□□ 0.08
TRAF3-208ENST00000560371 IDEP14735 1019 aa15.54■□□□□ 0.08
TRAF3-208ENST00000560371 TSHZ3Q63HK5 1081 aa15.54■□□□□ 0.08
TRAF3-208ENST00000560371 KSR2Q6VAB6 950 aa15.54■□□□□ 0.08
TRAF3-208ENST00000560371 SLC26A6Q9BXS9 759 aa15.54■□□□□ 0.08
TRAF3-208ENST00000560371 NBPF7P0C2Y1 421 aaPredicted RBP15.54■□□□□ 0.08
TRAF3-208ENST00000560371 NF2P35240 595 aa15.54■□□□□ 0.08
TRAF3-208ENST00000560371 ORC3Q9UBD5 711 aaPredicted RBP15.54■□□□□ 0.08
TRAF3-208ENST00000560371 CTAGE5O15320 804 aa15.54■□□□□ 0.08
TRAF3-208ENST00000560371 EIF4A2Q14240 407 aaKnown RBP15.53■□□□□ 0.08
TRAF3-208ENST00000560371 CKAP2LQ8IYA6 745 aa15.53■□□□□ 0.08
TRAF3-208ENST00000560371 ESR2Q92731 530 aa15.53■□□□□ 0.08
TRAF3-208ENST00000560371 KRT23Q9C075 422 aa15.53■□□□□ 0.08
TRAF3-208ENST00000560371 ZMYM3Q14202 1370 aa15.53■□□□□ 0.08
TRAF3-208ENST00000560371 ERLIN1O75477 346 aa15.53■□□□□ 0.08
TRAF3-208ENST00000560371 TMTC2Q8N394 836 aa15.53■□□□□ 0.08
TRAF3-208ENST00000560371 CWC15Q9P013 229 aaKnown RBP15.53■□□□□ 0.08
TRAF3-208ENST00000560371 FLT4P35916 1363 aa15.53■□□□□ 0.08
TRAF3-208ENST00000560371 RHPN1Q8TCX5 695 aa15.53■□□□□ 0.08
TRAF3-208ENST00000560371 SFPQP23246 707 aaKnown RBP eCLIP15.53■□□□□ 0.08
TRAF3-208ENST00000560371 TSPYL1Q9H0U9 437 aa15.53■□□□□ 0.08
TRAF3-208ENST00000560371 BTG4Q9NY30 223 aa15.53■□□□□ 0.08
TRAF3-208ENST00000560371 IL15P40933 162 aaPredicted RBP15.52■□□□□ 0.08
TRAF3-208ENST00000560371 UGGT2Q9NYU1 1516 aa15.52■□□□□ 0.08
TRAF3-208ENST00000560371 CCDC183Q5T5S1 534 aa15.52■□□□□ 0.08
TRAF3-208ENST00000560371 TCERG1LQ5VWI1 586 aa15.52■□□□□ 0.08
TRAF3-208ENST00000560371 PICALMQ13492 652 aa15.52■□□□□ 0.07
TRAF3-208ENST00000560371 CCDC178Q5BJE1 867 aa15.52■□□□□ 0.07
TRAF3-208ENST00000560371 TBC1D9Q6ZT07 1266 aa15.52■□□□□ 0.07
TRAF3-208ENST00000560371 MEIS3Q99687 375 aa15.52■□□□□ 0.07
TRAF3-208ENST00000560371 EZRP15311 586 aaKnown RBP15.52■□□□□ 0.07
TRAF3-208ENST00000560371 SLC4A4Q9Y6R1 1079 aa15.52■□□□□ 0.07
TRAF3-208ENST00000560371 CCDC148Q8NFR7 591 aa15.51■□□□□ 0.07
TRAF3-208ENST00000560371 CNNM2Q9H8M5 875 aa15.51■□□□□ 0.07
TRAF3-208ENST00000560371 VEZTQ9HBM0 779 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms