RNA–Protein interactions for RNA: ENST00000560097.1

AC104041.1-202, humanhuman

TSL 4 BASIC

Gene AC104041.1, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-202ENST00000560097 NPM2Q86SE8 214 aaKnown RBP15.25■□□□□ 0.03
AC104041.1-202ENST00000560097 CNKSR1Q969H4 720 aa15.25■□□□□ 0.03
AC104041.1-202ENST00000560097 PHAXQ9H814 394 aaKnown RBP15.25■□□□□ 0.03
AC104041.1-202ENST00000560097 IFT57Q9NWB7 429 aa15.25■□□□□ 0.03
AC104041.1-202ENST00000560097 PDZRN3Q9UPQ7 1066 aa15.25■□□□□ 0.03
AC104041.1-202ENST00000560097 LRRC37AA6NMS7 1700 aa15.25■□□□□ 0.03
AC104041.1-202ENST00000560097 HOXA10P31260 410 aaPredicted RBP15.24■□□□□ 0.03
AC104041.1-202ENST00000560097 HDGFL1Q5TGJ6 251 aa15.24■□□□□ 0.03
AC104041.1-202ENST00000560097 TSR2Q969E8 191 aaKnown RBP15.24■□□□□ 0.03
AC104041.1-202ENST00000560097 ZNF541Q9H0D2 1346 aa15.23■□□□□ 0.03
AC104041.1-202ENST00000560097 GLTPD2A6NH11 291 aa15.23■□□□□ 0.03
AC104041.1-202ENST00000560097 ELL2O00472 640 aaPredicted RBP15.23■□□□□ 0.03
AC104041.1-202ENST00000560097 HOXB7P09629 217 aa15.23■□□□□ 0.03
AC104041.1-202ENST00000560097 POTEIP0CG38 1075 aa15.23■□□□□ 0.03
AC104041.1-202ENST00000560097 POTEJP0CG39 1038 aa15.23■□□□□ 0.03
AC104041.1-202ENST00000560097 HSPA6P17066 643 aa15.23■□□□□ 0.03
AC104041.1-202ENST00000560097 HTRA3P83110 453 aa15.23■□□□□ 0.03
AC104041.1-202ENST00000560097 ISCA1Q9BUE6 129 aa15.23■□□□□ 0.03
AC104041.1-202ENST00000560097 SPINK5Q9NQ38 1064 aaPredicted RBP15.23■□□□□ 0.03
AC104041.1-202ENST00000560097 ZNF277Q9NRM2 450 aaPredicted RBP15.23■□□□□ 0.03
AC104041.1-202ENST00000560097 ADAMTSL1Q8N6G6 1762 aa15.23■□□□□ 0.03
AC104041.1-202ENST00000560097 ZC3H4Q9UPT8 1303 aaKnown RBP15.22■□□□□ 0.03
AC104041.1-202ENST00000560097 HCLS1P14317 486 aaPredicted RBP15.22■□□□□ 0.03
AC104041.1-202ENST00000560097 TCIRG1Q13488 830 aa15.22■□□□□ 0.03
AC104041.1-202ENST00000560097 SLC10A5Q5PT55 438 aa15.22■□□□□ 0.03
AC104041.1-202ENST00000560097 PPP4R3CPQ6ZMV5 832 aa15.22■□□□□ 0.03
AC104041.1-202ENST00000560097 WWC1Q8IX03 1113 aa15.22■□□□□ 0.03
AC104041.1-202ENST00000560097 TAOK3Q9H2K8 898 aa15.22■□□□□ 0.03
AC104041.1-202ENST00000560097 NPHP1O15259 732 aa15.21■□□□□ 0.03
AC104041.1-202ENST00000560097 TOMM70O94826 608 aa15.21■□□□□ 0.03
AC104041.1-202ENST00000560097 NYXQ9GZU5 481 aa15.21■□□□□ 0.03
AC104041.1-202ENST00000560097 ABCC4O15439 1325 aa15.2■□□□□ 0.02
AC104041.1-202ENST00000560097 ATP5J2-PTCD1G3V325 749 aa15.2■□□□□ 0.02
AC104041.1-202ENST00000560097 DDNO94850 711 aaPredicted RBP15.2■□□□□ 0.02
AC104041.1-202ENST00000560097 FKBP4Q02790 459 aaKnown RBP eCLIP15.2■□□□□ 0.02
AC104041.1-202ENST00000560097 PARP10Q53GL7 1025 aa15.2■□□□□ 0.02
AC104041.1-202ENST00000560097 CCDC93Q567U6 631 aa15.2■□□□□ 0.02
AC104041.1-202ENST00000560097 PLBD2Q8NHP8 589 aa15.2■□□□□ 0.02
AC104041.1-202ENST00000560097 MRS2Q9HD23 443 aa15.2■□□□□ 0.02
AC104041.1-202ENST00000560097 TCERG1O14776 1098 aaKnown RBP15.19■□□□□ 0.02
AC104041.1-202ENST00000560097 GNAI1P63096 354 aa15.19■□□□□ 0.02
AC104041.1-202ENST00000560097 CCDC27Q2M243 656 aa15.19■□□□□ 0.02
AC104041.1-202ENST00000560097 DNAJC5GQ8N7S2 189 aa15.19■□□□□ 0.02
AC104041.1-202ENST00000560097 RBM46Q8TBY0 533 aaKnown RBP15.19■□□□□ 0.02
AC104041.1-202ENST00000560097 UTP14AQ9BVJ6 771 aaKnown RBP15.19■□□□□ 0.02
AC104041.1-202ENST00000560097 G2E3Q7L622 706 aa15.18■□□□□ 0.02
AC104041.1-202ENST00000560097 CRAMP1Q96RY5 1269 aa15.18■□□□□ 0.02
AC104041.1-202ENST00000560097 DBF4Q9UBU7 674 aaPredicted RBP15.18■□□□□ 0.02
AC104041.1-202ENST00000560097 KDM2BQ8NHM5 1336 aa15.17■□□□□ 0.02
AC104041.1-202ENST00000560097 MAPK8IP2Q13387 824 aaPredicted RBP15.17■□□□□ 0.02
AC104041.1-202ENST00000560097 ANKRD13DQ6ZTN6 518 aa15.17■□□□□ 0.02
AC104041.1-202ENST00000560097 PPP1R42Q7Z4L9 355 aa15.17■□□□□ 0.02
AC104041.1-202ENST00000560097 FAM89AQ96GI7 184 aa15.17■□□□□ 0.02
AC104041.1-202ENST00000560097 SCN4AP35499 1836 aa15.16■□□□□ 0.02
AC104041.1-202ENST00000560097 GTF2E1P29083 439 aaPredicted RBP15.16■□□□□ 0.02
AC104041.1-202ENST00000560097 JARID2Q92833 1246 aaPredicted RBP15.16■□□□□ 0.02
AC104041.1-202ENST00000560097 PSMD1Q99460 953 aa15.16■□□□□ 0.02
AC104041.1-202ENST00000560097 PCNTO95613 3336 aa15.16■□□□□ 0.02
AC104041.1-202ENST00000560097 FANCIQ9NVI1 1328 aa15.16■□□□□ 0.02
AC104041.1-202ENST00000560097 FZD9O00144 591 aa15.15■□□□□ 0.02
AC104041.1-202ENST00000560097 PPEF1O14829 653 aaPredicted RBP15.15■□□□□ 0.02
AC104041.1-202ENST00000560097 ALDH1B1P30837 517 aa15.15■□□□□ 0.02
AC104041.1-202ENST00000560097 IARSP41252 1262 aaKnown RBP15.15■□□□□ 0.02
AC104041.1-202ENST00000560097 RTL5Q5HYW3 569 aaPredicted RBP15.15■□□□□ 0.02
AC104041.1-202ENST00000560097 HYPKQ9NX55 129 aa15.15■□□□□ 0.02
AC104041.1-202ENST00000560097 TRMT112Q9UI30 125 aaKnown RBP15.15■□□□□ 0.02
AC104041.1-202ENST00000560097 IGKV5-2P06315 115 aa15.14■□□□□ 0.01
AC104041.1-202ENST00000560097 TRIM28Q13263 835 aaKnown RBP15.14■□□□□ 0.01
AC104041.1-202ENST00000560097 SOGA3Q5TF21 947 aa15.14■□□□□ 0.01
AC104041.1-202ENST00000560097 RPGRQ92834 1020 aaKnown RBP15.14■□□□□ 0.01
AC104041.1-202ENST00000560097 CELF1Q92879 486 aaKnown RBP15.14■□□□□ 0.01
AC104041.1-202ENST00000560097 L3MBTL3Q96JM7 780 aaPredicted RBP15.14■□□□□ 0.01
AC104041.1-202ENST00000560097 SALL2Q9Y467 1007 aaPredicted RBP15.14■□□□□ 0.01
AC104041.1-202ENST00000560097 RNF123Q5XPI4 1314 aa15.14■□□□□ 0.01
AC104041.1-202ENST00000560097 SH3TC1Q8TE82 1336 aa15.14■□□□□ 0.01
AC104041.1-202ENST00000560097 ZNF521Q96K83 1311 aa15.14■□□□□ 0.01
AC104041.1-202ENST00000560097 ZNF646O15015 1829 aaPredicted RBP15.13■□□□□ 0.01
AC104041.1-202ENST00000560097 SCN9AQ15858 1988 aa15.13■□□□□ 0.01
AC104041.1-202ENST00000560097 ANP32CO43423 234 aa15.13■□□□□ 0.01
AC104041.1-202ENST00000560097 VEGFAP15692 232 aaPredicted RBP15.13■□□□□ 0.01
AC104041.1-202ENST00000560097 HSP90AB3PQ58FF7 597 aa15.13■□□□□ 0.01
AC104041.1-202ENST00000560097 ATP6V0A2Q9Y487 856 aa15.13■□□□□ 0.01
AC104041.1-202ENST00000560097 IL16Q14005 1332 aa15.13■□□□□ 0.01
AC104041.1-202ENST00000560097 SPEF2Q9C093 1822 aa15.13■□□□□ 0.01
AC104041.1-202ENST00000560097 RTKN2Q8IZC4 609 aa15.12■□□□□ 0.01
AC104041.1-202ENST00000560097 RBM17Q96I25 401 aaKnown RBP15.12■□□□□ 0.01
AC104041.1-202ENST00000560097 NLRP3Q96P20 1036 aa15.12■□□□□ 0.01
AC104041.1-202ENST00000560097 MYD88Q99836 296 aa15.12■□□□□ 0.01
AC104041.1-202ENST00000560097 RTFDC1Q9BY42 306 aaPredicted RBP15.12■□□□□ 0.01
AC104041.1-202ENST00000560097 FSTL1Q12841 308 aa15.11■□□□□ 0.01
AC104041.1-202ENST00000560097 SF3B3Q15393 1217 aaKnown RBP15.11■□□□□ 0.01
AC104041.1-202ENST00000560097 AOC3Q16853 763 aa15.11■□□□□ 0.01
AC104041.1-202ENST00000560097 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
AC104041.1-202ENST00000560097 SEC31BQ9NQW1 1179 aa15.11■□□□□ 0.01
AC104041.1-202ENST00000560097 MYH3P11055 1940 aa15.11■□□□□ 0.01
AC104041.1-202ENST00000560097 VAMP4O75379 141 aa15.1■□□□□ 0.01
AC104041.1-202ENST00000560097 GRAPQ13588 217 aa15.1■□□□□ 0.01
AC104041.1-202ENST00000560097 TWISTNBQ3B726 338 aaPredicted RBP15.1■□□□□ 0.01
AC104041.1-202ENST00000560097 GRAPLQ8TC17 118 aaPredicted RBP15.1■□□□□ 0.01
AC104041.1-202ENST00000560097 METTL22Q9BUU2 404 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms