RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 GRIPAP1Q4V328 841 aa11.56□□□□□ -0.56
SEMA4B-214ENST00000560003 SLC10A5Q5PT55 438 aa11.56□□□□□ -0.56
SEMA4B-214ENST00000560003 NLRP10Q86W26 655 aa11.56□□□□□ -0.56
SEMA4B-214ENST00000560003 MIER1Q8N108 512 aa11.56□□□□□ -0.56
SEMA4B-214ENST00000560003 TSPYL6Q8N831 410 aa11.56□□□□□ -0.56
SEMA4B-214ENST00000560003 TRMT112Q9UI30 125 aaKnown RBP11.56□□□□□ -0.56
SEMA4B-214ENST00000560003 WWC3Q9ULE0 1092 aa11.56□□□□□ -0.56
SEMA4B-214ENST00000560003 GOLGB1Q14789 3259 aaKnown RBP11.55□□□□□ -0.56
SEMA4B-214ENST00000560003 VAMP4O75379 141 aa11.55□□□□□ -0.56
SEMA4B-214ENST00000560003 ERFEQ4G0M1 354 aa11.55□□□□□ -0.56
SEMA4B-214ENST00000560003 KSR2Q6VAB6 950 aa11.55□□□□□ -0.56
SEMA4B-214ENST00000560003 CCDC24Q8N4L8 307 aa11.55□□□□□ -0.56
SEMA4B-214ENST00000560003 RPGRQ92834 1020 aaKnown RBP11.55□□□□□ -0.56
SEMA4B-214ENST00000560003 ZNF428Q96B54 188 aa11.55□□□□□ -0.56
SEMA4B-214ENST00000560003 RBM17Q96I25 401 aaKnown RBP11.55□□□□□ -0.56
SEMA4B-214ENST00000560003 VASPP50552 380 aaPredicted RBP11.54□□□□□ -0.56
SEMA4B-214ENST00000560003 CC2D2BQ6DHV5 1058 aa11.54□□□□□ -0.56
SEMA4B-214ENST00000560003 NUTM1Q86Y26 1132 aa11.54□□□□□ -0.56
SEMA4B-214ENST00000560003 CCDC191Q8NCU4 936 aa11.54□□□□□ -0.56
SEMA4B-214ENST00000560003 ISCA1Q9BUE6 129 aa11.54□□□□□ -0.56
SEMA4B-214ENST00000560003 SH3TC1Q8TE82 1336 aa11.54□□□□□ -0.56
SEMA4B-214ENST00000560003 ZNF521Q96K83 1311 aa11.54□□□□□ -0.56
SEMA4B-214ENST00000560003 NTSR2O95665 410 aa11.53□□□□□ -0.56
SEMA4B-214ENST00000560003 HOXA10P31260 410 aaPredicted RBP11.53□□□□□ -0.56
SEMA4B-214ENST00000560003 CRY2Q49AN0 593 aa11.53□□□□□ -0.56
SEMA4B-214ENST00000560003 RTKN2Q8IZC4 609 aa11.53□□□□□ -0.56
SEMA4B-214ENST00000560003 CRAMP1Q96RY5 1269 aa11.53□□□□□ -0.56
SEMA4B-214ENST00000560003 METTL22Q9BUU2 404 aaPredicted RBP11.53□□□□□ -0.56
SEMA4B-214ENST00000560003 PHAXQ9H814 394 aaKnown RBP11.53□□□□□ -0.56
SEMA4B-214ENST00000560003 LAMB4A4D0S4 1761 aa11.53□□□□□ -0.56
SEMA4B-214ENST00000560003 UBN2Q6ZU65 1347 aa11.53□□□□□ -0.56
SEMA4B-214ENST00000560003 UTRNP46939 3433 aa11.53□□□□□ -0.56
SEMA4B-214ENST00000560003 PI4KAP2A4QPH2 592 aa11.52□□□□□ -0.57
SEMA4B-214ENST00000560003 ATP5J2-PTCD1G3V325 749 aa11.52□□□□□ -0.57
SEMA4B-214ENST00000560003 BBOX1O75936 387 aa11.52□□□□□ -0.57
SEMA4B-214ENST00000560003 CT47B1P0C2W7 299 aaPredicted RBP11.52□□□□□ -0.57
SEMA4B-214ENST00000560003 SLFN5Q08AF3 891 aa11.52□□□□□ -0.57
SEMA4B-214ENST00000560003 PRPF40BQ6NWY9 871 aaKnown RBP11.52□□□□□ -0.57
SEMA4B-214ENST00000560003 PI4KAP1Q8N8J0 262 aa11.52□□□□□ -0.57
SEMA4B-214ENST00000560003 ZBTB38Q8NAP3 1195 aaPredicted RBP11.52□□□□□ -0.57
SEMA4B-214ENST00000560003 CWC25Q9NXE8 425 aaPredicted RBP11.52□□□□□ -0.57
SEMA4B-214ENST00000560003 MAP3K2Q9Y2U5 619 aa11.52□□□□□ -0.57
SEMA4B-214ENST00000560003 SCN7AQ01118 1682 aa11.52□□□□□ -0.57
SEMA4B-214ENST00000560003 C21orf2O43822 256 aa11.51□□□□□ -0.57
SEMA4B-214ENST00000560003 LMNB1P20700 586 aa11.51□□□□□ -0.57
SEMA4B-214ENST00000560003 FLIIQ13045 1269 aa11.51□□□□□ -0.57
SEMA4B-214ENST00000560003 FKBP5Q13451 457 aaPredicted RBP11.51□□□□□ -0.57
SEMA4B-214ENST00000560003 DDX46Q7L014 1031 aaKnown RBP11.51□□□□□ -0.57
SEMA4B-214ENST00000560003 MYD88Q99836 296 aa11.51□□□□□ -0.57
SEMA4B-214ENST00000560003 SPINK5Q9NQ38 1064 aaPredicted RBP11.51□□□□□ -0.57
SEMA4B-214ENST00000560003 TCERG1O14776 1098 aaKnown RBP11.5□□□□□ -0.57
SEMA4B-214ENST00000560003 MKRN4PQ13434 485 aaPredicted RBP11.5□□□□□ -0.57
SEMA4B-214ENST00000560003 CCDC93Q567U6 631 aa11.5□□□□□ -0.57
SEMA4B-214ENST00000560003 TMC4Q7Z404 712 aa11.5□□□□□ -0.57
SEMA4B-214ENST00000560003 ZNF784Q8NCA9 323 aaPredicted RBP11.5□□□□□ -0.57
SEMA4B-214ENST00000560003 KIF13BQ9NQT8 1826 aa11.5□□□□□ -0.57
SEMA4B-214ENST00000560003 RIC1Q4ADV7 1423 aa11.5□□□□□ -0.57
SEMA4B-214ENST00000560003 NRXN2Q9P2S2 1712 aa11.49□□□□□ -0.57
SEMA4B-214ENST00000560003 IRS4O14654 1257 aaPredicted RBP11.49□□□□□ -0.57
SEMA4B-214ENST00000560003 PCCAP05165 728 aaPredicted RBP11.49□□□□□ -0.57
SEMA4B-214ENST00000560003 HCLS1P14317 486 aaPredicted RBP11.49□□□□□ -0.57
SEMA4B-214ENST00000560003 C9orf131Q5VYM1 1079 aa11.49□□□□□ -0.57
SEMA4B-214ENST00000560003 FAM89AQ96GI7 184 aa11.49□□□□□ -0.57
SEMA4B-214ENST00000560003 TAOK3Q9H2K8 898 aa11.49□□□□□ -0.57
SEMA4B-214ENST00000560003 ZC3H4Q9UPT8 1303 aaKnown RBP11.49□□□□□ -0.57
SEMA4B-214ENST00000560003 SF3B3Q15393 1217 aaKnown RBP11.48□□□□□ -0.57
SEMA4B-214ENST00000560003 TRMT2AQ8IZ69 625 aaKnown RBP11.48□□□□□ -0.57
SEMA4B-214ENST00000560003 LINS1Q8NG48 757 aa11.48□□□□□ -0.57
SEMA4B-214ENST00000560003 C7orf43Q8WVR3 580 aa11.48□□□□□ -0.57
SEMA4B-214ENST00000560003 DNAAF4Q8WXU2 420 aa11.48□□□□□ -0.57
SEMA4B-214ENST00000560003 GPBP1L1Q9HC44 474 aaPredicted RBP11.48□□□□□ -0.57
SEMA4B-214ENST00000560003 RNF181Q9P0P0 153 aa11.48□□□□□ -0.57
SEMA4B-214ENST00000560003 LTBP3Q9NS15 1303 aa11.48□□□□□ -0.57
SEMA4B-214ENST00000560003 KDM2BQ8NHM5 1336 aa11.47□□□□□ -0.57
SEMA4B-214ENST00000560003 PDE8AO60658 829 aa11.47□□□□□ -0.57
SEMA4B-214ENST00000560003 C1QBPQ07021 282 aaKnown RBP11.47□□□□□ -0.57
SEMA4B-214ENST00000560003 ALDH1L2Q3SY69 923 aa11.47□□□□□ -0.57
SEMA4B-214ENST00000560003 CCDC152Q4G0S7 254 aa11.47□□□□□ -0.57
SEMA4B-214ENST00000560003 DPY19L2Q6NUT2 758 aa11.47□□□□□ -0.57
SEMA4B-214ENST00000560003 G2E3Q7L622 706 aa11.47□□□□□ -0.57
SEMA4B-214ENST00000560003 VPS33BQ9H267 617 aa11.47□□□□□ -0.57
SEMA4B-214ENST00000560003 BCORQ6W2J9 1755 aa11.46□□□□□ -0.57
SEMA4B-214ENST00000560003 ABCC12Q96J65 1359 aa11.46□□□□□ -0.57
SEMA4B-214ENST00000560003 PTPRCP08575 1304 aa11.46□□□□□ -0.57
SEMA4B-214ENST00000560003 PPEF1O14829 653 aaPredicted RBP11.46□□□□□ -0.57
SEMA4B-214ENST00000560003 HNRNPUQ00839 825 aaKnown RBP eCLIP11.46□□□□□ -0.57
SEMA4B-214ENST00000560003 FKBP4Q02790 459 aaKnown RBP eCLIP11.46□□□□□ -0.57
SEMA4B-214ENST00000560003 SP8Q8IXZ3 490 aa11.46□□□□□ -0.57
SEMA4B-214ENST00000560003 SUPT20HQ8NEM7 779 aa11.46□□□□□ -0.57
SEMA4B-214ENST00000560003 ATP6V0A2Q9Y487 856 aa11.46□□□□□ -0.57
SEMA4B-214ENST00000560003 NEURL1BA8MQ27 555 aa11.45□□□□□ -0.58
SEMA4B-214ENST00000560003 GRAPQ13588 217 aa11.45□□□□□ -0.58
SEMA4B-214ENST00000560003 GCKRQ14397 625 aa11.45□□□□□ -0.58
SEMA4B-214ENST00000560003 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
SEMA4B-214ENST00000560003 SYNE4Q8N205 404 aa11.45□□□□□ -0.58
SEMA4B-214ENST00000560003 GRAPLQ8TC17 118 aaPredicted RBP11.45□□□□□ -0.58
SEMA4B-214ENST00000560003 CDCA7LQ96GN5 454 aa11.45□□□□□ -0.58
SEMA4B-214ENST00000560003 PSMD1Q99460 953 aa11.45□□□□□ -0.58
SEMA4B-214ENST00000560003 AFDNP55196 1824 aaKnown RBP11.44□□□□□ -0.58
SEMA4B-214ENST00000560003 ADCY9O60503 1353 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms