RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 TRIM28Q13263 835 aaKnown RBP18.12■□□□□ 0.49
SMAD6-204ENST00000559931 TMEM57Q8N5G2 664 aa18.12■□□□□ 0.49
SMAD6-204ENST00000559931 CCDC191Q8NCU4 936 aa18.12■□□□□ 0.49
SMAD6-204ENST00000559931 UTP14AQ9BVJ6 771 aaKnown RBP18.12■□□□□ 0.49
SMAD6-204ENST00000559931 C9orf78Q9NZ63 289 aaPredicted RBP18.12■□□□□ 0.49
SMAD6-204ENST00000559931 TRMT112Q9UI30 125 aaKnown RBP18.12■□□□□ 0.49
SMAD6-204ENST00000559931 COL24A1Q17RW2 1714 aa18.12■□□□□ 0.49
SMAD6-204ENST00000559931 SERPINB2P05120 415 aa18.11■□□□□ 0.49
SMAD6-204ENST00000559931 PDE3AQ14432 1141 aa18.11■□□□□ 0.49
SMAD6-204ENST00000559931 RTL5Q5HYW3 569 aaPredicted RBP18.11■□□□□ 0.49
SMAD6-204ENST00000559931 SUSD4Q5VX71 490 aa18.11■□□□□ 0.49
SMAD6-204ENST00000559931 TPTE2Q6XPS3 522 aa18.11■□□□□ 0.49
SMAD6-204ENST00000559931 ITPRIPQ8IWB1 547 aa18.11■□□□□ 0.49
SMAD6-204ENST00000559931 NYXQ9GZU5 481 aa18.11■□□□□ 0.49
SMAD6-204ENST00000559931 ABCC4O15439 1325 aa18.11■□□□□ 0.49
SMAD6-204ENST00000559931 ATP10DQ9P241 1426 aa18.11■□□□□ 0.49
SMAD6-204ENST00000559931 CARMIL3Q8ND23 1372 aa18.1■□□□□ 0.49
SMAD6-204ENST00000559931 UBN2Q6ZU65 1347 aa18.1■□□□□ 0.49
SMAD6-204ENST00000559931 RLBP1P12271 317 aa18.1■□□□□ 0.49
SMAD6-204ENST00000559931 GCKRQ14397 625 aa18.1■□□□□ 0.49
SMAD6-204ENST00000559931 C20orf194Q5TEA3 1177 aa18.1■□□□□ 0.49
SMAD6-204ENST00000559931 INTS3Q68E01 1043 aaKnown RBP18.1■□□□□ 0.49
SMAD6-204ENST00000559931 SGIP1Q9BQI5 828 aa18.1■□□□□ 0.49
SMAD6-204ENST00000559931 DDR1Q08345 913 aa18.09■□□□□ 0.49
SMAD6-204ENST00000559931 JARID2Q92833 1246 aaPredicted RBP18.09■□□□□ 0.49
SMAD6-204ENST00000559931 COG6Q9Y2V7 657 aa18.09■□□□□ 0.49
SMAD6-204ENST00000559931 POLRMTO00411 1230 aaKnown RBP18.08■□□□□ 0.48
SMAD6-204ENST00000559931 CNBD1Q8NA66 436 aa18.08■□□□□ 0.48
SMAD6-204ENST00000559931 FAM89AQ96GI7 184 aa18.08■□□□□ 0.48
SMAD6-204ENST00000559931 PXDNLA1KZ92 1463 aa18.07■□□□□ 0.48
SMAD6-204ENST00000559931 UBE3BQ7Z3V4 1068 aa18.07■□□□□ 0.48
SMAD6-204ENST00000559931 NUTM1Q86Y26 1132 aa18.07■□□□□ 0.48
SMAD6-204ENST00000559931 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
SMAD6-204ENST00000559931 CCDC24Q8N4L8 307 aa18.07■□□□□ 0.48
SMAD6-204ENST00000559931 ZBTB38Q8NAP3 1195 aaPredicted RBP18.07■□□□□ 0.48
SMAD6-204ENST00000559931 RNF123Q5XPI4 1314 aa18.06■□□□□ 0.48
SMAD6-204ENST00000559931 SH3TC1Q8TE82 1336 aa18.06■□□□□ 0.48
SMAD6-204ENST00000559931 GRM8O00222 908 aa18.06■□□□□ 0.48
SMAD6-204ENST00000559931 ST5P78524 1137 aa18.06■□□□□ 0.48
SMAD6-204ENST00000559931 ERFEQ4G0M1 354 aa18.06■□□□□ 0.48
SMAD6-204ENST00000559931 H7C1W4 665 aa18.05■□□□□ 0.48
SMAD6-204ENST00000559931 NTSR2O95665 410 aa18.05■□□□□ 0.48
SMAD6-204ENST00000559931 PCCAP05165 728 aaPredicted RBP18.05■□□□□ 0.48
SMAD6-204ENST00000559931 IRX6P78412 446 aaPredicted RBP18.05■□□□□ 0.48
SMAD6-204ENST00000559931 MVPQ14764 893 aaKnown RBP18.05■□□□□ 0.48
SMAD6-204ENST00000559931 SYNE4Q8N205 404 aa18.05■□□□□ 0.48
SMAD6-204ENST00000559931 USP44Q9H0E7 712 aa18.05■□□□□ 0.48
SMAD6-204ENST00000559931 UBTFL1P0CB47 393 aaPredicted RBP18.04■□□□□ 0.48
SMAD6-204ENST00000559931 HSP90B1P14625 803 aaKnown RBP18.04■□□□□ 0.48
SMAD6-204ENST00000559931 PRR5LQ6MZQ0 368 aa18.04■□□□□ 0.48
SMAD6-204ENST00000559931 CHMP4BQ9H444 224 aaKnown RBP18.04■□□□□ 0.48
SMAD6-204ENST00000559931 DDX19BQ9UMR2 479 aa18.04■□□□□ 0.48
SMAD6-204ENST00000559931 IRS4O14654 1257 aaPredicted RBP18.03■□□□□ 0.48
SMAD6-204ENST00000559931 GNAI3P08754 354 aa18.03■□□□□ 0.48
SMAD6-204ENST00000559931 NBPF7P0C2Y1 421 aaPredicted RBP18.03■□□□□ 0.48
SMAD6-204ENST00000559931 HCLS1P14317 486 aaPredicted RBP18.03■□□□□ 0.48
SMAD6-204ENST00000559931 HDAC5Q9UQL6 1122 aa18.03■□□□□ 0.48
SMAD6-204ENST00000559931 NEFLP07196 543 aa18.02■□□□□ 0.48
SMAD6-204ENST00000559931 CRBNQ96SW2 442 aa18.02■□□□□ 0.48
SMAD6-204ENST00000559931 MEIS3Q99687 375 aa18.02■□□□□ 0.48
SMAD6-204ENST00000559931 FHDC1Q9C0D6 1143 aaPredicted RBP18.02■□□□□ 0.48
SMAD6-204ENST00000559931 IBTKQ9P2D0 1353 aaPredicted RBP18.02■□□□□ 0.47
SMAD6-204ENST00000559931 N4BP2Q86UW6 1770 aaPredicted RBP18.02■□□□□ 0.47
SMAD6-204ENST00000559931 ZBTB7BO15156 539 aaPredicted RBP18■□□□□ 0.47
SMAD6-204ENST00000559931 SLC10A5Q5PT55 438 aa18■□□□□ 0.47
SMAD6-204ENST00000559931 NLRP3Q96P20 1036 aa18■□□□□ 0.47
SMAD6-204ENST00000559931 CDHR2Q9BYE9 1310 aa17.99■□□□□ 0.47
SMAD6-204ENST00000559931 PDE8AO60658 829 aa17.99■□□□□ 0.47
SMAD6-204ENST00000559931 BRIP1Q9BX63 1249 aa17.99■□□□□ 0.47
SMAD6-204ENST00000559931 UTYO14607 1347 aa17.98■□□□□ 0.47
SMAD6-204ENST00000559931 GNAI2P04899 355 aa17.98■□□□□ 0.47
SMAD6-204ENST00000559931 PDE6BP35913 854 aa17.98■□□□□ 0.47
SMAD6-204ENST00000559931 CASP7P55210 303 aa17.98■□□□□ 0.47
SMAD6-204ENST00000559931 SUCLG2Q96I99 432 aa17.98■□□□□ 0.47
SMAD6-204ENST00000559931 CHMP3Q9Y3E7 222 aa17.98■□□□□ 0.47
SMAD6-204ENST00000559931 LRRFIP2Q9Y608 721 aaKnown RBP17.98■□□□□ 0.47
SMAD6-204ENST00000559931 ABCC12Q96J65 1359 aa17.97■□□□□ 0.47
SMAD6-204ENST00000559931 SYT17Q9BSW7 474 aa17.97■□□□□ 0.47
SMAD6-204ENST00000559931 NRXN2Q9P2S2 1712 aa17.96■□□□□ 0.47
SMAD6-204ENST00000559931 EXOC6Q8TAG9 804 aa17.96■□□□□ 0.47
SMAD6-204ENST00000559931 RPGRQ92834 1020 aaKnown RBP17.96■□□□□ 0.47
SMAD6-204ENST00000559931 CCDC85AQ96PX6 553 aaPredicted RBP17.96■□□□□ 0.47
SMAD6-204ENST00000559931 C1orf115Q9H7X2 142 aa17.96■□□□□ 0.47
SMAD6-204ENST00000559931 H0YIN7 160 aa17.95■□□□□ 0.46
SMAD6-204ENST00000559931 LMBR1LQ6UX01 489 aa17.95■□□□□ 0.46
SMAD6-204ENST00000559931 C2CD5Q86YS7 1000 aa17.95■□□□□ 0.46
SMAD6-204ENST00000559931 NLGN2Q8NFZ4 835 aa17.95■□□□□ 0.46
SMAD6-204ENST00000559931 PLA2G12BQ9BX93 195 aa17.95■□□□□ 0.46
SMAD6-204ENST00000559931 BICC1Q9H694 974 aaKnown RBP17.95■□□□□ 0.46
SMAD6-204ENST00000559931 ZBTB40Q9NUA8 1239 aa17.95■□□□□ 0.46
SMAD6-204ENST00000559931 MYH3P11055 1940 aa17.94■□□□□ 0.46
SMAD6-204ENST00000559931 CTSWP56202 376 aa17.94■□□□□ 0.46
SMAD6-204ENST00000559931 FOXO4P98177 505 aa17.94■□□□□ 0.46
SMAD6-204ENST00000559931 CCDC152Q4G0S7 254 aa17.94■□□□□ 0.46
SMAD6-204ENST00000559931 EPHA10Q5JZY3 1008 aa17.94■□□□□ 0.46
SMAD6-204ENST00000559931 C3orf67Q6ZVT6 689 aa17.94■□□□□ 0.46
SMAD6-204ENST00000559931 CD2APQ9Y5K6 639 aa17.94■□□□□ 0.46
SMAD6-204ENST00000559931 DDX60Q8IY21 1712 aaKnown RBP17.94■□□□□ 0.46
SMAD6-204ENST00000559931 KIF13BQ9NQT8 1826 aa17.93■□□□□ 0.46
SMAD6-204ENST00000559931 TTLL11Q8NHH1 800 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms