RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 PPP4R2Q9NY27 417 aa13.11□□□□□ -0.31
TPM1-221ENST00000559831 NIP7Q9Y221 180 aaKnown RBP eCLIP13.11□□□□□ -0.31
TPM1-221ENST00000559831 PNPLA7Q6ZV29 1317 aa13.11□□□□□ -0.31
TPM1-221ENST00000559831 COL24A1Q17RW2 1714 aa13.1□□□□□ -0.31
TPM1-221ENST00000559831 NBPF7P0C2Y1 421 aaPredicted RBP13.1□□□□□ -0.31
TPM1-221ENST00000559831 AAMPQ13685 434 aa13.1□□□□□ -0.31
TPM1-221ENST00000559831 RTL5Q5HYW3 569 aaPredicted RBP13.1□□□□□ -0.31
TPM1-221ENST00000559831 TBC1D9BQ66K14 1250 aa13.1□□□□□ -0.31
TPM1-221ENST00000559831 CLEC4GQ6UXB4 293 aa13.1□□□□□ -0.31
TPM1-221ENST00000559831 NLRP10Q86W26 655 aa13.1□□□□□ -0.31
TPM1-221ENST00000559831 UBN2Q6ZU65 1347 aa13.1□□□□□ -0.31
TPM1-221ENST00000559831 MYH3P11055 1940 aa13.09□□□□□ -0.31
TPM1-221ENST00000559831 RGL2O15211 777 aa13.09□□□□□ -0.31
TPM1-221ENST00000559831 GNAI2P04899 355 aa13.09□□□□□ -0.31
TPM1-221ENST00000559831 TRIM28Q13263 835 aaKnown RBP13.09□□□□□ -0.31
TPM1-221ENST00000559831 UBE3BQ7Z3V4 1068 aa13.09□□□□□ -0.31
TPM1-221ENST00000559831 LRRFIP2Q9Y608 721 aaKnown RBP13.09□□□□□ -0.31
TPM1-221ENST00000559831 LAMB2P55268 1798 aa13.08□□□□□ -0.32
TPM1-221ENST00000559831 CASZ1Q86V15 1759 aa13.08□□□□□ -0.32
TPM1-221ENST00000559831 GYS1P13807 737 aa13.08□□□□□ -0.32
TPM1-221ENST00000559831 PARP10Q53GL7 1025 aa13.08□□□□□ -0.32
TPM1-221ENST00000559831 B4GALNT3Q6L9W6 998 aa13.08□□□□□ -0.32
TPM1-221ENST00000559831 SUCLG2Q96I99 432 aa13.08□□□□□ -0.32
TPM1-221ENST00000559831 CCDC136Q96JN2 1154 aa13.08□□□□□ -0.32
TPM1-221ENST00000559831 SETDB2Q96T68 719 aa13.08□□□□□ -0.32
TPM1-221ENST00000559831 TRMT112Q9UI30 125 aaKnown RBP13.08□□□□□ -0.32
TPM1-221ENST00000559831 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.32
TPM1-221ENST00000559831 UTYO14607 1347 aa13.08□□□□□ -0.32
TPM1-221ENST00000559831 IBTKQ9P2D0 1353 aaPredicted RBP13.07□□□□□ -0.32
TPM1-221ENST00000559831 H7C1W4 665 aa13.07□□□□□ -0.32
TPM1-221ENST00000559831 PCCAP05165 728 aaPredicted RBP13.07□□□□□ -0.32
TPM1-221ENST00000559831 SUSD4Q5VX71 490 aa13.07□□□□□ -0.32
TPM1-221ENST00000559831 PPP1R42Q7Z4L9 355 aa13.07□□□□□ -0.32
TPM1-221ENST00000559831 UTP14AQ9BVJ6 771 aaKnown RBP13.07□□□□□ -0.32
TPM1-221ENST00000559831 DDX60Q8IY21 1712 aaKnown RBP13.07□□□□□ -0.32
TPM1-221ENST00000559831 NFIXQ14938 502 aa13.06□□□□□ -0.32
TPM1-221ENST00000559831 ZBTB38Q8NAP3 1195 aaPredicted RBP13.06□□□□□ -0.32
TPM1-221ENST00000559831 FAM89AQ96GI7 184 aa13.06□□□□□ -0.32
TPM1-221ENST00000559831 HDAC5Q9UQL6 1122 aa13.06□□□□□ -0.32
TPM1-221ENST00000559831 NPHP1O15259 732 aa13.05□□□□□ -0.32
TPM1-221ENST00000559831 NTSR2O95665 410 aa13.05□□□□□ -0.32
TPM1-221ENST00000559831 CASP7P55210 303 aa13.05□□□□□ -0.32
TPM1-221ENST00000559831 MSL1Q68DK7 614 aa13.05□□□□□ -0.32
TPM1-221ENST00000559831 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
TPM1-221ENST00000559831 NBPF5PQ86XG9 351 aaPredicted RBP13.05□□□□□ -0.32
TPM1-221ENST00000559831 SYNE4Q8N205 404 aa13.05□□□□□ -0.32
TPM1-221ENST00000559831 BICC1Q9H694 974 aaKnown RBP13.05□□□□□ -0.32
TPM1-221ENST00000559831 CARMIL3Q8ND23 1372 aa13.05□□□□□ -0.32
TPM1-221ENST00000559831 GTF2E1P29083 439 aaPredicted RBP13.04□□□□□ -0.32
TPM1-221ENST00000559831 NUTM1Q86Y26 1132 aa13.04□□□□□ -0.32
TPM1-221ENST00000559831 ANKRD44Q8N8A2 993 aa13.04□□□□□ -0.32
TPM1-221ENST00000559831 NYXQ9GZU5 481 aa13.04□□□□□ -0.32
TPM1-221ENST00000559831 SH3TC1Q8TE82 1336 aa13.04□□□□□ -0.32
TPM1-221ENST00000559831 CDHR2Q9BYE9 1310 aa13.04□□□□□ -0.32
TPM1-221ENST00000559831 IRS4O14654 1257 aaPredicted RBP13.03□□□□□ -0.32
TPM1-221ENST00000559831 ERFEQ4G0M1 354 aa13.03□□□□□ -0.32
TPM1-221ENST00000559831 EPHA10Q5JZY3 1008 aa13.03□□□□□ -0.32
TPM1-221ENST00000559831 RPAP2Q8IXW5 612 aaPredicted RBP13.03□□□□□ -0.32
TPM1-221ENST00000559831 NLGN1Q8N2Q7 840 aa13.03□□□□□ -0.32
TPM1-221ENST00000559831 KAZALD1Q96I82 304 aa13.03□□□□□ -0.32
TPM1-221ENST00000559831 PDGFDQ9GZP0 370 aaPredicted RBP13.03□□□□□ -0.32
TPM1-221ENST00000559831 RWDD1Q9H446 243 aaPredicted RBP13.03□□□□□ -0.32
TPM1-221ENST00000559831 CHMP3Q9Y3E7 222 aa13.03□□□□□ -0.32
TPM1-221ENST00000559831 IGHDP01880 384 aa13.02□□□□□ -0.33
TPM1-221ENST00000559831 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
TPM1-221ENST00000559831 TM4SF1P30408 202 aa13.02□□□□□ -0.33
TPM1-221ENST00000559831 ATP8B2P98198 1209 aa13.02□□□□□ -0.33
TPM1-221ENST00000559831 DDR1Q08345 913 aa13.02□□□□□ -0.33
TPM1-221ENST00000559831 R3HDM1Q15032 1099 aaKnown RBP13.02□□□□□ -0.33
TPM1-221ENST00000559831 SIRT2Q8IXJ6 389 aa13.02□□□□□ -0.33
TPM1-221ENST00000559831 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.33
TPM1-221ENST00000559831 PNMA6EA0A0J9YXQ4 647 aa13.01□□□□□ -0.33
TPM1-221ENST00000559831 POLRMTO00411 1230 aaKnown RBP13.01□□□□□ -0.33
TPM1-221ENST00000559831 SRGAP3O43295 1099 aa13.01□□□□□ -0.33
TPM1-221ENST00000559831 HMMRO75330 724 aa13.01□□□□□ -0.33
TPM1-221ENST00000559831 SERPINB2P05120 415 aa13.01□□□□□ -0.33
TPM1-221ENST00000559831 FOXO4P98177 505 aa13.01□□□□□ -0.33
TPM1-221ENST00000559831 LMBR1LQ6UX01 489 aa13.01□□□□□ -0.33
TPM1-221ENST00000559831 TPTE2Q6XPS3 522 aa13.01□□□□□ -0.33
TPM1-221ENST00000559831 CNBD1Q8NA66 436 aa13.01□□□□□ -0.33
TPM1-221ENST00000559831 CCDC85AQ96PX6 553 aaPredicted RBP13.01□□□□□ -0.33
TPM1-221ENST00000559831 PARP3Q9Y6F1 533 aa13.01□□□□□ -0.33
TPM1-221ENST00000559831 ABCC12Q96J65 1359 aa13.01□□□□□ -0.33
TPM1-221ENST00000559831 TNRC6CQ9HCJ0 1690 aaKnown RBP13.01□□□□□ -0.33
TPM1-221ENST00000559831 SPEF2Q9C093 1822 aa13.01□□□□□ -0.33
TPM1-221ENST00000559831 NRXN2Q9P2S2 1712 aa13□□□□□ -0.33
TPM1-221ENST00000559831 PSDA5PKW4 1024 aaPredicted RBP13□□□□□ -0.33
TPM1-221ENST00000559831 PDE8AO60658 829 aa13□□□□□ -0.33
TPM1-221ENST00000559831 MMP10P09238 476 aa13□□□□□ -0.33
TPM1-221ENST00000559831 HSP90B1P14625 803 aaKnown RBP13□□□□□ -0.33
TPM1-221ENST00000559831 HDAC1Q13547 482 aaPredicted RBP13□□□□□ -0.33
TPM1-221ENST00000559831 PLA2G12BQ9BX93 195 aa13□□□□□ -0.33
TPM1-221ENST00000559831 CTSWP56202 376 aa12.99□□□□□ -0.33
TPM1-221ENST00000559831 ST5P78524 1137 aa12.99□□□□□ -0.33
TPM1-221ENST00000559831 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
TPM1-221ENST00000559831 PRR5LQ6MZQ0 368 aa12.99□□□□□ -0.33
TPM1-221ENST00000559831 TAF1P21675 1872 aa12.99□□□□□ -0.33
TPM1-221ENST00000559831 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
TPM1-221ENST00000559831 ZBTB7AO95365 584 aa12.98□□□□□ -0.33
TPM1-221ENST00000559831 MTX1Q13505 466 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms