RNA–Protein interactions for RNA: ENST00000559669.1

TGM1-205, Transcript of transglutaminase 1, human

TSL 3

Gene TGM1, Length 412 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGM1-205	ENST00000559669	SCN4A	P35499	1836 aa		13.18	□□□□□ -0.3
TGM1-205	ENST00000559669	DICER1	Q9UPY3	1922 aa	Known RBP	13.17	□□□□□ -0.3
TGM1-205	ENST00000559669	WDR33	Q9C0J8	1336 aa	Known RBP	13.17	□□□□□ -0.3
TGM1-205	ENST00000559669	HSPA8	P11142	646 aa	Known RBP	13.17	□□□□□ -0.3
TGM1-205	ENST00000559669	NPR1	P16066	1061 aa		13.17	□□□□□ -0.3
TGM1-205	ENST00000559669	TEF	Q10587	303 aa		13.17	□□□□□ -0.3
TGM1-205	ENST00000559669	JDP2	Q8WYK2	163 aa		13.17	□□□□□ -0.3
TGM1-205	ENST00000559669	PPP4R2	Q9NY27	417 aa		13.17	□□□□□ -0.3
TGM1-205	ENST00000559669	FANCI	Q9NVI1	1328 aa		13.16	□□□□□ -0.3
TGM1-205	ENST00000559669	CCDC85C	A6NKD9	419 aa		13.16	□□□□□ -0.3
TGM1-205	ENST00000559669	CA12	O43570	354 aa		13.16	□□□□□ -0.3
TGM1-205	ENST00000559669	MS4A1	P11836	297 aa		13.16	□□□□□ -0.3
TGM1-205	ENST00000559669	LMOD1	P29536	600 aa	Predicted RBP	13.16	□□□□□ -0.3
TGM1-205	ENST00000559669	ALDH1B1	P30837	517 aa		13.16	□□□□□ -0.3
TGM1-205	ENST00000559669	CLEC4G	Q6UXB4	293 aa		13.16	□□□□□ -0.3
TGM1-205	ENST00000559669	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.16	□□□□□ -0.3
TGM1-205	ENST00000559669	GPC2	Q8N158	579 aa		13.16	□□□□□ -0.3
TGM1-205	ENST00000559669	FER1L6	Q2WGJ9	1857 aa		13.16	□□□□□ -0.3
TGM1-205	ENST00000559669	CCDC88A	Q3V6T2	1871 aa		13.16	□□□□□ -0.3
TGM1-205	ENST00000559669	RGL2	O15211	777 aa		13.15	□□□□□ -0.3
TGM1-205	ENST00000559669	RGS19	P49795	217 aa		13.15	□□□□□ -0.3
TGM1-205	ENST00000559669	IRX6	P78412	446 aa	Predicted RBP	13.15	□□□□□ -0.3
TGM1-205	ENST00000559669	EXOSC9	Q06265	439 aa	Known RBP	13.15	□□□□□ -0.3
TGM1-205	ENST00000559669	GRIPAP1	Q4V328	841 aa		13.15	□□□□□ -0.3
TGM1-205	ENST00000559669	FMNL2	Q96PY5	1086 aa		13.15	□□□□□ -0.3
TGM1-205	ENST00000559669	BABAM1	Q9NWV8	329 aa		13.15	□□□□□ -0.3
TGM1-205	ENST00000559669	TBC1D2B	Q9UPU7	963 aa		13.15	□□□□□ -0.3
TGM1-205	ENST00000559669	ZNF853	P0CG23	659 aa		13.14	□□□□□ -0.31
TGM1-205	ENST00000559669	EIF6	P56537	245 aa	Known RBP	13.14	□□□□□ -0.31
TGM1-205	ENST00000559669	ZNF790	Q6PG37	636 aa		13.14	□□□□□ -0.31
TGM1-205	ENST00000559669	TPTE2	Q6XPS3	522 aa		13.14	□□□□□ -0.31
TGM1-205	ENST00000559669	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.14	□□□□□ -0.31
TGM1-205	ENST00000559669	TSR2	Q969E8	191 aa	Known RBP	13.14	□□□□□ -0.31
TGM1-205	ENST00000559669	HEG1	Q9ULI3	1381 aa		13.14	□□□□□ -0.31
TGM1-205	ENST00000559669	RARS	P54136	660 aa	Known RBP	13.13	□□□□□ -0.31
TGM1-205	ENST00000559669	CC2D2B	Q6DHV5	1058 aa		13.13	□□□□□ -0.31
TGM1-205	ENST00000559669	MCM10	Q7L590	875 aa		13.13	□□□□□ -0.31
TGM1-205	ENST00000559669	DZIP3	Q86Y13	1208 aa	Known RBP	13.13	□□□□□ -0.31
TGM1-205	ENST00000559669	THUMPD2	Q9BTF0	503 aa	Known RBP	13.13	□□□□□ -0.31
TGM1-205	ENST00000559669	CHMP4A	Q9BY43	222 aa		13.13	□□□□□ -0.31
TGM1-205	ENST00000559669	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
TGM1-205	ENST00000559669	CHL1	O00533	1208 aa		13.12	□□□□□ -0.31
TGM1-205	ENST00000559669	IPO8	O15397	1037 aa	Known RBP	13.12	□□□□□ -0.31
TGM1-205	ENST00000559669	CAMTA2	O94983	1202 aa		13.12	□□□□□ -0.31
TGM1-205	ENST00000559669	MAP2K2	P36507	400 aa		13.12	□□□□□ -0.31
TGM1-205	ENST00000559669	IARS	P41252	1262 aa	Known RBP	13.12	□□□□□ -0.31
TGM1-205	ENST00000559669	DCTN1	Q14203	1278 aa		13.12	□□□□□ -0.31
TGM1-205	ENST00000559669	TAF7	Q15545	349 aa	Predicted RBP	13.12	□□□□□ -0.31
TGM1-205	ENST00000559669	ALDH1L2	Q3SY69	923 aa		13.12	□□□□□ -0.31
TGM1-205	ENST00000559669	MAP1S	Q66K74	1059 aa	Predicted RBP	13.12	□□□□□ -0.31
TGM1-205	ENST00000559669	C7orf43	Q8WVR3	580 aa		13.12	□□□□□ -0.31
TGM1-205	ENST00000559669	ZNF496	Q96IT1	587 aa	Predicted RBP	13.12	□□□□□ -0.31
TGM1-205	ENST00000559669	GPR101	Q96P66	508 aa	Predicted RBP	13.12	□□□□□ -0.31
TGM1-205	ENST00000559669	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.12	□□□□□ -0.31
TGM1-205	ENST00000559669	FZD9	O00144	591 aa		13.11	□□□□□ -0.31
TGM1-205	ENST00000559669	PDE3A	Q14432	1141 aa		13.11	□□□□□ -0.31
TGM1-205	ENST00000559669	CCDC24	Q8N4L8	307 aa		13.11	□□□□□ -0.31
TGM1-205	ENST00000559669	CAPNS2	Q96L46	248 aa		13.11	□□□□□ -0.31
TGM1-205	ENST00000559669	PSMD1	Q99460	953 aa		13.11	□□□□□ -0.31
TGM1-205	ENST00000559669	MBIP	Q9NS73	344 aa		13.11	□□□□□ -0.31
TGM1-205	ENST00000559669	SCN7A	Q01118	1682 aa		13.11	□□□□□ -0.31
TGM1-205	ENST00000559669	ZNF541	Q9H0D2	1346 aa		13.11	□□□□□ -0.31
TGM1-205	ENST00000559669	KLRG2	A4D1S0	409 aa	Predicted RBP	13.1	□□□□□ -0.31
TGM1-205	ENST00000559669	GTF2E1	P29083	439 aa	Predicted RBP	13.1	□□□□□ -0.31
TGM1-205	ENST00000559669	USP50	Q70EL3	339 aa	Predicted RBP	13.1	□□□□□ -0.31
TGM1-205	ENST00000559669	TMX4	Q9H1E5	349 aa	Predicted RBP	13.1	□□□□□ -0.31
TGM1-205	ENST00000559669	SMC4	Q9NTJ3	1288 aa		13.1	□□□□□ -0.31
TGM1-205	ENST00000559669	TSPYL4	Q9UJ04	414 aa		13.1	□□□□□ -0.31
TGM1-205	ENST00000559669	PLIN1	O60240	522 aa		13.09	□□□□□ -0.31
TGM1-205	ENST00000559669	BCAR3	O75815	825 aa		13.09	□□□□□ -0.31
TGM1-205	ENST00000559669	TWISTNB	Q3B726	338 aa	Predicted RBP	13.09	□□□□□ -0.31
TGM1-205	ENST00000559669	SYNE4	Q8N205	404 aa		13.09	□□□□□ -0.31
TGM1-205	ENST00000559669	ANKRD31	Q8N7Z5	1873 aa		13.09	□□□□□ -0.31
TGM1-205	ENST00000559669	FRAT1	Q92837	279 aa	Predicted RBP	13.09	□□□□□ -0.31
TGM1-205	ENST00000559669	KIF16B	Q96L93	1317 aa		13.09	□□□□□ -0.31
TGM1-205	ENST00000559669	VIRMA	Q69YN4	1812 aa	Known RBP	13.09	□□□□□ -0.31
TGM1-205	ENST00000559669	COL11A2	P13942	1736 aa	Predicted RBP	13.08	□□□□□ -0.32
TGM1-205	ENST00000559669	AAMP	Q13685	434 aa		13.08	□□□□□ -0.32
TGM1-205	ENST00000559669	ZKSCAN2	Q63HK3	967 aa		13.08	□□□□□ -0.32
TGM1-205	ENST00000559669	HHIPL1	Q96JK4	782 aa		13.08	□□□□□ -0.32
TGM1-205	ENST00000559669	NYX	Q9GZU5	481 aa		13.08	□□□□□ -0.32
TGM1-205	ENST00000559669	DLG5	Q8TDM6	1919 aa		13.07	□□□□□ -0.32
TGM1-205	ENST00000559669	UBR2	Q8IWV8	1755 aa		13.07	□□□□□ -0.32
TGM1-205	ENST00000559669	ARFGEF2	Q9Y6D5	1785 aa		13.07	□□□□□ -0.32
TGM1-205	ENST00000559669	SLX4	Q8IY92	1834 aa		13.07	□□□□□ -0.32
TGM1-205	ENST00000559669	VAMP4	O75379	141 aa		13.07	□□□□□ -0.32
TGM1-205	ENST00000559669	A1BG	P04217	495 aa		13.07	□□□□□ -0.32
TGM1-205	ENST00000559669	GRM1	Q13255	1194 aa		13.07	□□□□□ -0.32
TGM1-205	ENST00000559669	IL17RE	Q8NFR9	667 aa		13.07	□□□□□ -0.32
TGM1-205	ENST00000559669	CCDC136	Q96JN2	1154 aa		13.07	□□□□□ -0.32
TGM1-205	ENST00000559669	GJA3	Q9Y6H8	435 aa		13.07	□□□□□ -0.32
TGM1-205	ENST00000559669	TLL2	Q9Y6L7	1015 aa		13.07	□□□□□ -0.32
TGM1-205	ENST00000559669	BTBD11	A6QL63	1104 aa		13.06	□□□□□ -0.32
TGM1-205	ENST00000559669	BRPF1	P55201	1214 aa	Predicted RBP	13.06	□□□□□ -0.32
TGM1-205	ENST00000559669	SSH1	Q8WYL5	1049 aa		13.06	□□□□□ -0.32
TGM1-205	ENST00000559669	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.06	□□□□□ -0.32
TGM1-205	ENST00000559669	ADAMTSL1	Q8N6G6	1762 aa		13.06	□□□□□ -0.32
TGM1-205	ENST00000559669	SNRPA1	P09661	255 aa	Known RBP	13.05	□□□□□ -0.32
TGM1-205	ENST00000559669	CYP4F22	Q6NT55	531 aa		13.05	□□□□□ -0.32
TGM1-205	ENST00000559669	FTSJ3	Q8IY81	847 aa	Known RBP	13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms