RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 MAP3K2Q9Y2U5 619 aa24.02■■□□□ 1.44
CASC4-209ENST00000559222 UTRNP46939 3433 aa24.01■■□□□ 1.43
CASC4-209ENST00000559222 DCAF8L1A6NGE4 600 aa24.01■■□□□ 1.43
CASC4-209ENST00000559222 PDE6BP35913 854 aa24.01■■□□□ 1.43
CASC4-209ENST00000559222 FLIIQ13045 1269 aa24.01■■□□□ 1.43
CASC4-209ENST00000559222 NYXQ9GZU5 481 aa24.01■■□□□ 1.43
CASC4-209ENST00000559222 PIM2Q9P1W9 311 aa24.01■■□□□ 1.43
CASC4-209ENST00000559222 PI4KAP2A4QPH2 592 aa24■■□□□ 1.43
CASC4-209ENST00000559222 H0YIN7 160 aa24■■□□□ 1.43
CASC4-209ENST00000559222 PI4KAP1Q8N8J0 262 aa24■■□□□ 1.43
CASC4-209ENST00000559222 UTP14AQ9BVJ6 771 aaKnown RBP24■■□□□ 1.43
CASC4-209ENST00000559222 RIC1Q4ADV7 1423 aa24■■□□□ 1.43
CASC4-209ENST00000559222 GTF2E1P29083 439 aaPredicted RBP23.99■■□□□ 1.43
CASC4-209ENST00000559222 PPP1R42Q7Z4L9 355 aa23.99■■□□□ 1.43
CASC4-209ENST00000559222 ZNF622Q969S3 477 aaKnown RBP eCLIP23.99■■□□□ 1.431e-7■□□□□ 10.9
CASC4-209ENST00000559222 CHMP4AQ9BY43 222 aa23.99■■□□□ 1.43
CASC4-209ENST00000559222 SRGNP10124 158 aa23.98■■□□□ 1.43
CASC4-209ENST00000559222 DALRD3Q5D0E6 543 aaKnown RBP23.98■■□□□ 1.43
CASC4-209ENST00000559222 KSR2Q6VAB6 950 aa23.98■■□□□ 1.43
CASC4-209ENST00000559222 METTL22Q9BUU2 404 aaPredicted RBP23.98■■□□□ 1.43
CASC4-209ENST00000559222 TAF1P21675 1872 aa23.98■■□□□ 1.43
CASC4-209ENST00000559222 KLRG2A4D1S0 409 aaPredicted RBP23.97■■□□□ 1.43
CASC4-209ENST00000559222 DDX58O95786 925 aaKnown RBP23.97■■□□□ 1.43
CASC4-209ENST00000559222 COL4A1P02462 1669 aa23.97■■□□□ 1.43
CASC4-209ENST00000559222 RTL5Q5HYW3 569 aaPredicted RBP23.97■■□□□ 1.43
CASC4-209ENST00000559222 BCL2L13Q9BXK5 485 aa23.97■■□□□ 1.43
CASC4-209ENST00000559222 TRMT112Q9UI30 125 aaKnown RBP23.97■■□□□ 1.43
CASC4-209ENST00000559222 IGKV5-2P06315 115 aa23.96■■□□□ 1.43
CASC4-209ENST00000559222 HCLS1P14317 486 aaPredicted RBP23.96■■□□□ 1.43
CASC4-209ENST00000559222 FKBP5Q13451 457 aaPredicted RBP23.96■■□□□ 1.43
CASC4-209ENST00000559222 SLC51AQ86UW1 340 aa23.96■■□□□ 1.43
CASC4-209ENST00000559222 SSH1Q8WYL5 1049 aa23.96■■□□□ 1.43
CASC4-209ENST00000559222 JARID2Q92833 1246 aaPredicted RBP23.96■■□□□ 1.43
CASC4-209ENST00000559222 F6X3S4 739 aa23.95■■□□□ 1.42
CASC4-209ENST00000559222 MRPL50Q8N5N7 158 aaKnown RBP23.95■■□□□ 1.42
CASC4-209ENST00000559222 FAM89AQ96GI7 184 aa23.95■■□□□ 1.42
CASC4-209ENST00000559222 ZNF219Q9P2Y4 722 aaPredicted RBP23.95■■□□□ 1.42
CASC4-209ENST00000559222 GRIN3BO60391 1043 aa23.94■■□□□ 1.42
CASC4-209ENST00000559222 CWF19L2Q2TBE0 894 aaKnown RBP23.94■■□□□ 1.42
CASC4-209ENST00000559222 TTLL6Q8N841 843 aa23.94■■□□□ 1.42
CASC4-209ENST00000559222 ZBED9Q6R2W3 1325 aa23.93■■□□□ 1.42
CASC4-209ENST00000559222 SH3TC1Q8TE82 1336 aa23.93■■□□□ 1.42
CASC4-209ENST00000559222 TRIM28Q13263 835 aaKnown RBP23.93■■□□□ 1.42
CASC4-209ENST00000559222 CRY2Q49AN0 593 aa23.93■■□□□ 1.42
CASC4-209ENST00000559222 STYK1Q6J9G0 422 aa23.93■■□□□ 1.42
CASC4-209ENST00000559222 MASTLQ96GX5 879 aa23.93■■□□□ 1.42
CASC4-209ENST00000559222 SBF1O95248 1867 aa23.92■■□□□ 1.42
CASC4-209ENST00000559222 FER1L6Q2WGJ9 1857 aa23.92■■□□□ 1.42
CASC4-209ENST00000559222 SLC10A5Q5PT55 438 aa23.92■■□□□ 1.42
CASC4-209ENST00000559222 RNF123Q5XPI4 1314 aa23.91■■□□□ 1.42
CASC4-209ENST00000559222 NPR1P16066 1061 aa23.91■■□□□ 1.42
CASC4-209ENST00000559222 PRPF40BQ6NWY9 871 aaKnown RBP23.91■■□□□ 1.42
CASC4-209ENST00000559222 DNAAF4Q8WXU2 420 aa23.91■■□□□ 1.42
CASC4-209ENST00000559222 CCDC88AQ3V6T2 1871 aa23.9■■□□□ 1.42
CASC4-209ENST00000559222 OLFM4Q6UX06 510 aa23.9■■□□□ 1.42
CASC4-209ENST00000559222 ARHGAP27Q6ZUM4 889 aa23.9■■□□□ 1.42
CASC4-209ENST00000559222 PDZRN3Q9UPQ7 1066 aa23.9■■□□□ 1.42
CASC4-209ENST00000559222 NEURL1BA8MQ27 555 aa23.89■■□□□ 1.41
CASC4-209ENST00000559222 C21orf2O43822 256 aa23.89■■□□□ 1.41
CASC4-209ENST00000559222 RASSF7Q02833 373 aa23.89■■□□□ 1.41
CASC4-209ENST00000559222 CCDC191Q8NCU4 936 aa23.89■■□□□ 1.41
CASC4-209ENST00000559222 CWC25Q9NXE8 425 aaPredicted RBP23.89■■□□□ 1.41
CASC4-209ENST00000559222 MYH3P11055 1940 aa23.88■■□□□ 1.41
CASC4-209ENST00000559222 PRELPP51888 382 aa23.87■■□□□ 1.41
CASC4-209ENST00000559222 ZBTB38Q8NAP3 1195 aaPredicted RBP23.87■■□□□ 1.41
CASC4-209ENST00000559222 CNKSR1Q969H4 720 aa23.87■■□□□ 1.41
CASC4-209ENST00000559222 SMC4Q9NTJ3 1288 aa23.87■■□□□ 1.41
CASC4-209ENST00000559222 IRS4O14654 1257 aaPredicted RBP23.86■■□□□ 1.41
CASC4-209ENST00000559222 PCCAP05165 728 aaPredicted RBP23.86■■□□□ 1.41
CASC4-209ENST00000559222 C7orf43Q8WVR3 580 aa23.86■■□□□ 1.41
CASC4-209ENST00000559222 RPGRQ92834 1020 aaKnown RBP23.86■■□□□ 1.41
CASC4-209ENST00000559222 NLRP3Q96P20 1036 aa23.86■■□□□ 1.41
CASC4-209ENST00000559222 NFKBIEO00221 500 aa23.85■■□□□ 1.41
CASC4-209ENST00000559222 HOXA10P31260 410 aaPredicted RBP23.85■■□□□ 1.41
CASC4-209ENST00000559222 NEXNQ0ZGT2 675 aa23.85■■□□□ 1.41
CASC4-209ENST00000559222 ALDH1L2Q3SY69 923 aa23.85■■□□□ 1.41
CASC4-209ENST00000559222 BEND3Q5T5X7 828 aa23.85■■□□□ 1.41
CASC4-209ENST00000559222 ABCC4O15439 1325 aa23.84■■□□□ 1.41
CASC4-209ENST00000559222 RARSP54136 660 aaKnown RBP23.84■■□□□ 1.41
CASC4-209ENST00000559222 SPEF2Q9C093 1822 aa23.84■■□□□ 1.41
CASC4-209ENST00000559222 TIAM2Q8IVF5 1701 aa23.84■■□□□ 1.41
CASC4-209ENST00000559222 SNED1Q8TER0 1413 aa23.84■■□□□ 1.41
CASC4-209ENST00000559222 GCKRQ14397 625 aa23.83■■□□□ 1.41
CASC4-209ENST00000559222 LINS1Q8NG48 757 aa23.83■■□□□ 1.41
CASC4-209ENST00000559222 CT47B1P0C2W7 299 aaPredicted RBP23.82■■□□□ 1.4
CASC4-209ENST00000559222 SLC4A10Q6U841 1118 aa23.82■■□□□ 1.4
CASC4-209ENST00000559222 UBE3BQ7Z3V4 1068 aa23.82■■□□□ 1.4
CASC4-209ENST00000559222 LRRC37AA6NMS7 1700 aa23.81■■□□□ 1.4
CASC4-209ENST00000559222 CASP7P55210 303 aa23.81■■□□□ 1.4
CASC4-209ENST00000559222 RBM17Q96I25 401 aaKnown RBP23.81■■□□□ 1.4
CASC4-209ENST00000559222 CRAMP1Q96RY5 1269 aa23.81■■□□□ 1.4
CASC4-209ENST00000559222 CDHR2Q9BYE9 1310 aa23.81■■□□□ 1.4
CASC4-209ENST00000559222 H7C1W4 665 aa23.8■■□□□ 1.4
CASC4-209ENST00000559222 CCDC85AQ96PX6 553 aaPredicted RBP23.8■■□□□ 1.4
CASC4-209ENST00000559222 DICER1Q9UPY3 1922 aaKnown RBP23.79■■□□□ 1.4
CASC4-209ENST00000559222 BCAR3O75815 825 aa23.79■■□□□ 1.4
CASC4-209ENST00000559222 ALDH1B1P30837 517 aa23.79■■□□□ 1.4
CASC4-209ENST00000559222 SF3B3Q15393 1217 aaKnown RBP23.79■■□□□ 1.4
CASC4-209ENST00000559222 NOB1Q9ULX3 412 aaKnown RBP23.79■■□□□ 1.4
CASC4-209ENST00000559222 PTPRCP08575 1304 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms