RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 EPHA4P54764 986 aa5.83□□□□□ -1.48
LRRC28-212ENST00000558911 NRG1Q02297 640 aaPredicted RBP5.83□□□□□ -1.48
LRRC28-212ENST00000558911 C7orf43Q8WVR3 580 aa5.83□□□□□ -1.48
LRRC28-212ENST00000558911 TSPAN10Q9H1Z9 355 aaPredicted RBP5.83□□□□□ -1.48
LRRC28-212ENST00000558911 ANKIB1Q9P2G1 1089 aa5.83□□□□□ -1.48
LRRC28-212ENST00000558911 PSAPL1Q6NUJ1 521 aa5.82□□□□□ -1.48
LRRC28-212ENST00000558911 NGLY1Q96IV0 654 aa5.82□□□□□ -1.48
LRRC28-212ENST00000558911 SUSD3Q96L08 255 aa5.82□□□□□ -1.48
LRRC28-212ENST00000558911 KRTAP4-12Q9BQ66 201 aa5.82□□□□□ -1.48
LRRC28-212ENST00000558911 SLC6A14Q9UN76 642 aa5.82□□□□□ -1.48
LRRC28-212ENST00000558911 USP17L5A8MUK1 530 aa5.81□□□□□ -1.48
LRRC28-212ENST00000558911 PSMA6P60900 246 aaKnown RBP5.81□□□□□ -1.48
LRRC28-212ENST00000558911 TYRO3Q06418 890 aa5.81□□□□□ -1.48
LRRC28-212ENST00000558911 LENG1Q96BZ8 264 aaPredicted RBP5.81□□□□□ -1.48
LRRC28-212ENST00000558911 PNMA5Q96PV4 448 aa5.81□□□□□ -1.48
LRRC28-212ENST00000558911 KIAA1024Q9UPX6 916 aa5.81□□□□□ -1.48
LRRC28-212ENST00000558911 GPC6Q9Y625 555 aaPredicted RBP5.81□□□□□ -1.48
LRRC28-212ENST00000558911 PPP1R12BO60237 982 aaPredicted RBP5.8□□□□□ -1.48
LRRC28-212ENST00000558911 RGS9O75916 674 aaPredicted RBP5.8□□□□□ -1.48
LRRC28-212ENST00000558911 AFF1P51825 1210 aaKnown RBP5.8□□□□□ -1.48
LRRC28-212ENST00000558911 CCDC102BQ68D86 513 aa5.8□□□□□ -1.48
LRRC28-212ENST00000558911 CHMP7Q8WUX9 453 aaPredicted RBP5.8□□□□□ -1.48
LRRC28-212ENST00000558911 DNAJB12Q9NXW2 375 aaKnown RBP5.8□□□□□ -1.48
LRRC28-212ENST00000558911 LZTS3O60299 673 aaPredicted RBP5.79□□□□□ -1.48
LRRC28-212ENST00000558911 IREB2P48200 963 aaKnown RBP5.79□□□□□ -1.48
LRRC28-212ENST00000558911 C1orf53Q5VUE5 145 aa5.79□□□□□ -1.48
LRRC28-212ENST00000558911 FMR1NBQ8N0W7 255 aaPredicted RBP5.79□□□□□ -1.48
LRRC28-212ENST00000558911 CPB1P15086 417 aa5.78□□□□□ -1.48
LRRC28-212ENST00000558911 NFKB1P19838 968 aa5.78□□□□□ -1.48
LRRC28-212ENST00000558911 KCNQ4P56696 695 aa5.78□□□□□ -1.48
LRRC28-212ENST00000558911 KRT25Q7Z3Z0 450 aa5.78□□□□□ -1.48
LRRC28-212ENST00000558911 BTLAQ7Z6A9 289 aa5.78□□□□□ -1.48
LRRC28-212ENST00000558911 TRIM50Q86XT4 487 aa5.78□□□□□ -1.48
LRRC28-212ENST00000558911 ALDH16A1Q8IZ83 802 aa5.78□□□□□ -1.48
LRRC28-212ENST00000558911 TSEN2Q8NCE0 465 aaKnown RBP5.78□□□□□ -1.48
LRRC28-212ENST00000558911 NAGPAQ9UK23 515 aa5.78□□□□□ -1.48
LRRC28-212ENST00000558911 ZBTB7BO15156 539 aaPredicted RBP5.77□□□□□ -1.49
LRRC28-212ENST00000558911 FAM35AQ86V20 835 aa5.77□□□□□ -1.49
LRRC28-212ENST00000558911 WFDC12Q8WWY7 111 aa5.77□□□□□ -1.49
LRRC28-212ENST00000558911 ZNF594Q96JF6 807 aaPredicted RBP5.77□□□□□ -1.49
LRRC28-212ENST00000558911 ALG2Q9H553 416 aa5.77□□□□□ -1.49
LRRC28-212ENST00000558911 RBM19Q9Y4C8 960 aaKnown RBP5.77□□□□□ -1.49
LRRC28-212ENST00000558911 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.77□□□□□ -1.49
LRRC28-212ENST00000558911 BTBD11A6QL63 1104 aa5.76□□□□□ -1.49
LRRC28-212ENST00000558911 LGR5O75473 907 aa5.76□□□□□ -1.49
LRRC28-212ENST00000558911 ATP1A2P50993 1020 aa5.76□□□□□ -1.49
LRRC28-212ENST00000558911 CLDN10P78369 228 aa5.76□□□□□ -1.49
LRRC28-212ENST00000558911 MLLT1Q03111 559 aaPredicted RBP5.76□□□□□ -1.49
LRRC28-212ENST00000558911 MCM6Q14566 821 aa5.76□□□□□ -1.49
LRRC28-212ENST00000558911 MSL1Q68DK7 614 aa5.76□□□□□ -1.49
LRRC28-212ENST00000558911 WWC1Q8IX03 1113 aa5.76□□□□□ -1.49
LRRC28-212ENST00000558911 PCMTD2Q9NV79 361 aa5.76□□□□□ -1.49
LRRC28-212ENST00000558911 COG6Q9Y2V7 657 aa5.76□□□□□ -1.49
LRRC28-212ENST00000558911 USP17L3A6NCW0 530 aa5.75□□□□□ -1.49
LRRC28-212ENST00000558911 USP17L4A6NCW7 530 aa5.75□□□□□ -1.49
LRRC28-212ENST00000558911 NOS3P29474 1203 aa5.75□□□□□ -1.49
LRRC28-212ENST00000558911 SSTR4P31391 388 aa5.75□□□□□ -1.49
LRRC28-212ENST00000558911 PLAURQ03405 335 aa5.75□□□□□ -1.49
LRRC28-212ENST00000558911 CCINQ13939 588 aa5.75□□□□□ -1.49
LRRC28-212ENST00000558911 USP17L2Q6R6M4 530 aa5.75□□□□□ -1.49
LRRC28-212ENST00000558911 USP17L1Q7RTZ2 530 aa5.75□□□□□ -1.49
LRRC28-212ENST00000558911 OGFOD1Q8N543 542 aa5.75□□□□□ -1.49
LRRC28-212ENST00000558911 NFATC2IPQ8NCF5 419 aa5.75□□□□□ -1.49
LRRC28-212ENST00000558911 GAS2L2Q8NHY3 880 aa5.75□□□□□ -1.49
LRRC28-212ENST00000558911 SCG3Q8WXD2 468 aaKnown RBP5.75□□□□□ -1.49
LRRC28-212ENST00000558911 SSBP4Q9BWG4 385 aaPredicted RBP5.75□□□□□ -1.49
LRRC28-212ENST00000558911 GSX2Q9BZM3 304 aa5.75□□□□□ -1.49
LRRC28-212ENST00000558911 ELMSAN1Q6PJG2 1045 aa5.74□□□□□ -1.49
LRRC28-212ENST00000558911 HFE2Q6ZVN8 426 aa5.74□□□□□ -1.49
LRRC28-212ENST00000558911 WFDC8Q8IUA0 241 aa5.74□□□□□ -1.49
LRRC28-212ENST00000558911 MEGF10Q96KG7 1140 aa5.74□□□□□ -1.49
LRRC28-212ENST00000558911 GOLGA2P5Q9HBQ8 144 aa5.74□□□□□ -1.49
LRRC28-212ENST00000558911 MKRN1Q9UHC7 482 aaKnown RBP5.74□□□□□ -1.49
LRRC28-212ENST00000558911 RNF112Q9ULX5 631 aa5.74□□□□□ -1.49
LRRC28-212ENST00000558911 ATAD2Q6PL18 1390 aa5.74□□□□□ -1.49
LRRC28-212ENST00000558911 ERCC6L2Q5T890 1561 aa5.74□□□□□ -1.49
LRRC28-212ENST00000558911 POM121CA8CG34 1229 aa5.73□□□□□ -1.49
LRRC28-212ENST00000558911 HIRAP54198 1017 aaPredicted RBP5.73□□□□□ -1.49
LRRC28-212ENST00000558911 KRTAP19-1Q8IUB9 90 aa5.73□□□□□ -1.49
LRRC28-212ENST00000558911 POM121Q96HA1 1249 aa5.73□□□□□ -1.49
LRRC28-212ENST00000558911 KRTAP9-9Q9BYP9 154 aa5.73□□□□□ -1.49
LRRC28-212ENST00000558911 KRTAP9-4Q9BYQ2 154 aa5.73□□□□□ -1.49
LRRC28-212ENST00000558911 ZMYND15Q9H091 742 aa5.73□□□□□ -1.49
LRRC28-212ENST00000558911 C21orf2O43822 256 aa5.72□□□□□ -1.49
LRRC28-212ENST00000558911 ALX3O95076 343 aa5.72□□□□□ -1.49
LRRC28-212ENST00000558911 RASA1P20936 1047 aa5.72□□□□□ -1.49
LRRC28-212ENST00000558911 HIF1AQ16665 826 aa5.72□□□□□ -1.49
LRRC28-212ENST00000558911 PERM1Q5SV97 790 aa5.72□□□□□ -1.49
LRRC28-212ENST00000558911 MCTP1Q6DN14 999 aa5.72□□□□□ -1.49
LRRC28-212ENST00000558911 FBXO11Q86XK2 927 aa5.72□□□□□ -1.49
LRRC28-212ENST00000558911 HINFPQ9BQA5 517 aa5.72□□□□□ -1.49
LRRC28-212ENST00000558911 PALM3A6NDB9 673 aaPredicted RBP5.71□□□□□ -1.5
LRRC28-212ENST00000558911 TARSP26639 723 aaKnown RBP5.71□□□□□ -1.5
LRRC28-212ENST00000558911 PRR23CQ6ZRP0 262 aa5.71□□□□□ -1.5
LRRC28-212ENST00000558911 LARGE2Q8N3Y3 721 aa5.71□□□□□ -1.5
LRRC28-212ENST00000558911 ARID3AQ99856 593 aa5.71□□□□□ -1.5
LRRC28-212ENST00000558911 LPIN3Q9BQK8 851 aa5.71□□□□□ -1.5
LRRC28-212ENST00000558911 SMG9Q9H0W8 520 aaKnown RBP5.71□□□□□ -1.5
LRRC28-212ENST00000558911 ZBTB42B2RXF5 422 aa5.7□□□□□ -1.5
LRRC28-212ENST00000558911 SASH3O75995 380 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms