RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 FBXO41Q8TF61 875 aa25.24■■□□□ 1.63
SNRPA1-205ENST00000558036 SIL1Q9H173 461 aa25.24■■□□□ 1.63
SNRPA1-205ENST00000558036 RABL6Q3YEC7 729 aaPredicted RBP25.24■■□□□ 1.63
SNRPA1-205ENST00000558036 LMBR1LQ6UX01 489 aa25.24■■□□□ 1.63
SNRPA1-205ENST00000558036 RHPN1Q8TCX5 695 aa25.24■■□□□ 1.63
SNRPA1-205ENST00000558036 NOP58Q9Y2X3 529 aaKnown RBP25.24■■□□□ 1.63
SNRPA1-205ENST00000558036 RAB11FIP3O75154 756 aa25.23■■□□□ 1.63
SNRPA1-205ENST00000558036 CAMTA2O94983 1202 aa25.23■■□□□ 1.63
SNRPA1-205ENST00000558036 HSP90AB3PQ58FF7 597 aa25.23■■□□□ 1.63
SNRPA1-205ENST00000558036 TSHZ3Q63HK5 1081 aa25.23■■□□□ 1.63
SNRPA1-205ENST00000558036 CHMP3Q9Y3E7 222 aa25.23■■□□□ 1.63
SNRPA1-205ENST00000558036 ZNF831Q5JPB2 1677 aa25.23■■□□□ 1.63
SNRPA1-205ENST00000558036 UBN2Q6ZU65 1347 aa25.22■■□□□ 1.63
SNRPA1-205ENST00000558036 CNTNAP4Q9C0A0 1308 aa25.22■■□□□ 1.63
SNRPA1-205ENST00000558036 SEC24BO95487 1268 aa25.22■■□□□ 1.63
SNRPA1-205ENST00000558036 RGS17Q9UGC6 210 aaPredicted RBP25.22■■□□□ 1.63
SNRPA1-205ENST00000558036 GSPT1P15170 499 aaKnown RBP25.21■■□□□ 1.63
SNRPA1-205ENST00000558036 RXRBP28702 533 aa25.21■■□□□ 1.63
SNRPA1-205ENST00000558036 BMP2KLQ5H9B9 411 aa25.21■■□□□ 1.63
SNRPA1-205ENST00000558036 KIF1BPQ96EK5 621 aa25.21■■□□□ 1.63
SNRPA1-205ENST00000558036 ZBTB38Q8NAP3 1195 aaPredicted RBP25.2■■□□□ 1.62
SNRPA1-205ENST00000558036 GNPATO15228 680 aa25.19■■□□□ 1.62
SNRPA1-205ENST00000558036 PCCAP05165 728 aaPredicted RBP25.19■■□□□ 1.62
SNRPA1-205ENST00000558036 HSP90AB4PQ58FF6 505 aa25.19■■□□□ 1.62
SNRPA1-205ENST00000558036 AMIGO3Q86WK7 504 aa25.19■■□□□ 1.62
SNRPA1-205ENST00000558036 ZNF34Q8IZ26 560 aa25.19■■□□□ 1.62
SNRPA1-205ENST00000558036 LRRC4BQ9NT99 713 aa25.19■■□□□ 1.62
SNRPA1-205ENST00000558036 RFX5P48382 616 aaPredicted RBP25.19■■□□□ 1.62
SNRPA1-205ENST00000558036 NUTM1Q86Y26 1132 aa25.19■■□□□ 1.62
SNRPA1-205ENST00000558036 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.19■■□□□ 1.62
SNRPA1-205ENST00000558036 FAM177BA6PVY3 158 aa25.18■■□□□ 1.62
SNRPA1-205ENST00000558036 PDE1AP54750 535 aa25.18■■□□□ 1.62
SNRPA1-205ENST00000558036 TRMT112Q9UI30 125 aaKnown RBP25.18■■□□□ 1.62
SNRPA1-205ENST00000558036 NUP98P52948 1817 aa25.18■■□□□ 1.62
SNRPA1-205ENST00000558036 PTPN12Q05209 780 aaKnown RBP25.18■■□□□ 1.62
SNRPA1-205ENST00000558036 TTC22Q5TAA0 569 aa25.18■■□□□ 1.62
SNRPA1-205ENST00000558036 SALL3Q9BXA9 1300 aa25.17■■□□□ 1.62
SNRPA1-205ENST00000558036 G3BP1Q13283 466 aaKnown RBP eCLIP25.17■■□□□ 1.62
SNRPA1-205ENST00000558036 CCDC85AQ96PX6 553 aaPredicted RBP25.17■■□□□ 1.62
SNRPA1-205ENST00000558036 LY75O60449 1722 aa25.17■■□□□ 1.62
SNRPA1-205ENST00000558036 SASH1O94885 1247 aa25.16■■□□□ 1.62
SNRPA1-205ENST00000558036 MX1P20591 662 aa25.16■■□□□ 1.62
SNRPA1-205ENST00000558036 RC3H1Q5TC82 1133 aaKnown RBP25.16■■□□□ 1.62
SNRPA1-205ENST00000558036 POTEAQ6S8J7 498 aa25.16■■□□□ 1.62
SNRPA1-205ENST00000558036 ANKRD36CQ5JPF3 1778 aa25.15■■□□□ 1.62
SNRPA1-205ENST00000558036 RPS6KA4O75676 772 aa25.15■■□□□ 1.62
SNRPA1-205ENST00000558036 SUSD4Q5VX71 490 aa25.15■■□□□ 1.62
SNRPA1-205ENST00000558036 COPRSQ9NQ92 184 aa25.15■■□□□ 1.62
SNRPA1-205ENST00000558036 NIP7Q9Y221 180 aaKnown RBP eCLIP25.15■■□□□ 1.62
SNRPA1-205ENST00000558036 ERC1Q8IUD2 1116 aa25.13■■□□□ 1.61
SNRPA1-205ENST00000558036 SRP68Q9UHB9 627 aaKnown RBP25.13■■□□□ 1.61
SNRPA1-205ENST00000558036 ZNF594Q96JF6 807 aaPredicted RBP25.13■■□□□ 1.61
SNRPA1-205ENST00000558036 OSBPL3Q9H4L5 887 aa25.13■■□□□ 1.61
SNRPA1-205ENST00000558036 RTCBQ9Y3I0 505 aaKnown RBP25.13■■□□□ 1.61
SNRPA1-205ENST00000558036 IRS4O14654 1257 aaPredicted RBP25.12■■□□□ 1.61
SNRPA1-205ENST00000558036 PHF14O94880 888 aa25.12■■□□□ 1.61
SNRPA1-205ENST00000558036 CLASRPQ8N2M8 674 aaKnown RBP25.11■■□□□ 1.61
SNRPA1-205ENST00000558036 ZNF652Q9Y2D9 606 aa25.11■■□□□ 1.61
SNRPA1-205ENST00000558036 CDHR2Q9BYE9 1310 aa25.11■■□□□ 1.61
SNRPA1-205ENST00000558036 SDSP20132 328 aa25.1■■□□□ 1.61
SNRPA1-205ENST00000558036 USPL1Q5W0Q7 1092 aa25.1■■□□□ 1.61
SNRPA1-205ENST00000558036 PLA2G12BQ9BX93 195 aa25.1■■□□□ 1.61
SNRPA1-205ENST00000558036 BICDL1Q6ZP65 573 aa25.1■■□□□ 1.61
SNRPA1-205ENST00000558036 AK7Q96M32 723 aa25.1■■□□□ 1.61
SNRPA1-205ENST00000558036 BCL2L12Q9HB09 334 aa25.1■■□□□ 1.61
SNRPA1-205ENST00000558036 C4BP0C0L5 1744 aa25.1■■□□□ 1.61
SNRPA1-205ENST00000558036 AACSQ86V21 672 aa25.09■■□□□ 1.61
SNRPA1-205ENST00000558036 TAF1LQ8IZX4 1826 aa25.09■■□□□ 1.61
SNRPA1-205ENST00000558036 ARHGEF1Q92888 912 aaKnown RBP25.09■■□□□ 1.61
SNRPA1-205ENST00000558036 STAP2Q9UGK3 403 aa25.09■■□□□ 1.61
SNRPA1-205ENST00000558036 UTP14AQ9BVJ6 771 aaKnown RBP25.09■■□□□ 1.61
SNRPA1-205ENST00000558036 HCLS1P14317 486 aaPredicted RBP25.08■■□□□ 1.61
SNRPA1-205ENST00000558036 CLEC4GQ6UXB4 293 aa25.08■■□□□ 1.61
SNRPA1-205ENST00000558036 PROM2Q8N271 834 aa25.08■■□□□ 1.61
SNRPA1-205ENST00000558036 EAF2Q96CJ1 260 aaPredicted RBP25.08■■□□□ 1.61
SNRPA1-205ENST00000558036 NARFQ9UHQ1 456 aa25.08■■□□□ 1.61
SNRPA1-205ENST00000558036 CSF1RP07333 972 aa25.07■■□□□ 1.6
SNRPA1-205ENST00000558036 CTSWP56202 376 aa25.07■■□□□ 1.6
SNRPA1-205ENST00000558036 TFCP2Q12800 502 aa25.07■■□□□ 1.6
SNRPA1-205ENST00000558036 CCDC57Q2TAC2 916 aa25.07■■□□□ 1.6
SNRPA1-205ENST00000558036 PARP10Q53GL7 1025 aa25.07■■□□□ 1.6
SNRPA1-205ENST00000558036 TBC1D9Q6ZT07 1266 aa25.07■■□□□ 1.6
SNRPA1-205ENST00000558036 TTLL11Q8NHH1 800 aa25.07■■□□□ 1.6
SNRPA1-205ENST00000558036 SH3TC1Q8TE82 1336 aa25.07■■□□□ 1.6
SNRPA1-205ENST00000558036 TBC1D9BQ66K14 1250 aa25.07■■□□□ 1.6
SNRPA1-205ENST00000558036 CCDC8Q9H0W5 538 aaPredicted RBP25.07■■□□□ 1.6
SNRPA1-205ENST00000558036 GREM2Q9H772 168 aa25.07■■□□□ 1.6
SNRPA1-205ENST00000558036 BCORQ6W2J9 1755 aa25.07■■□□□ 1.6
SNRPA1-205ENST00000558036 ZPR1O75312 459 aa25.06■■□□□ 1.6
SNRPA1-205ENST00000558036 NTSR2O95665 410 aa25.06■■□□□ 1.6
SNRPA1-205ENST00000558036 IFIT2P09913 472 aaKnown RBP25.06■■□□□ 1.6
SNRPA1-205ENST00000558036 LRRC24Q50LG9 513 aa25.06■■□□□ 1.6
SNRPA1-205ENST00000558036 TLR7Q9NYK1 1049 aaKnown RBP25.06■■□□□ 1.6
SNRPA1-205ENST00000558036 MFAP1P55081 439 aaKnown RBP25.06■■□□□ 1.6
SNRPA1-205ENST00000558036 SLC27A3Q5K4L6 730 aa25.06■■□□□ 1.6
SNRPA1-205ENST00000558036 ATG9AQ7Z3C6 839 aa25.06■■□□□ 1.6
SNRPA1-205ENST00000558036 PUS3Q9BZE2 481 aaKnown RBP25.06■■□□□ 1.6
SNRPA1-205ENST00000558036 PDE8AO60658 829 aa25.05■■□□□ 1.6
SNRPA1-205ENST00000558036 APBA3O96018 575 aa25.05■■□□□ 1.6
SNRPA1-205ENST00000558036 TXNRD1Q16881 649 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms