RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TWISTNBQ3B726 338 aaPredicted RBP16.1■□□□□ 0.17
SLIRP-211ENST00000557623 TSPYL6Q8N831 410 aa16.1■□□□□ 0.17
SLIRP-211ENST00000557623 NYXQ9GZU5 481 aa16.1■□□□□ 0.17
SLIRP-211ENST00000557623 ARFGEF2Q9Y6D5 1785 aa16.1■□□□□ 0.17
SLIRP-211ENST00000557623 H0YIN7 160 aa16.09■□□□□ 0.17
SLIRP-211ENST00000557623 KCNA3P22001 575 aa16.09■□□□□ 0.17
SLIRP-211ENST00000557623 GTF2E1P29083 439 aaPredicted RBP16.09■□□□□ 0.17
SLIRP-211ENST00000557623 ZNF34Q8IZ26 560 aa16.09■□□□□ 0.17
SLIRP-211ENST00000557623 PLBD2Q8NHP8 589 aa16.09■□□□□ 0.17
SLIRP-211ENST00000557623 ZNF521Q96K83 1311 aa16.09■□□□□ 0.17
SLIRP-211ENST00000557623 IBTKQ9P2D0 1353 aaPredicted RBP16.09■□□□□ 0.17
SLIRP-211ENST00000557623 CHRNA5P30532 468 aa16.08■□□□□ 0.16
SLIRP-211ENST00000557623 PARP10Q53GL7 1025 aa16.08■□□□□ 0.16
SLIRP-211ENST00000557623 ANKRD13DQ6ZTN6 518 aa16.08■□□□□ 0.16
SLIRP-211ENST00000557623 C2CD5Q86YS7 1000 aa16.08■□□□□ 0.16
SLIRP-211ENST00000557623 STK31Q9BXU1 1019 aa16.08■□□□□ 0.16
SLIRP-211ENST00000557623 BCS1LQ9Y276 419 aa16.08■□□□□ 0.16
SLIRP-211ENST00000557623 COL11A2P13942 1736 aaPredicted RBP16.08■□□□□ 0.16
SLIRP-211ENST00000557623 CACNA1SQ13698 1873 aa16.08■□□□□ 0.16
SLIRP-211ENST00000557623 FAM177BA6PVY3 158 aa16.07■□□□□ 0.16
SLIRP-211ENST00000557623 GPTP24298 496 aa16.07■□□□□ 0.16
SLIRP-211ENST00000557623 DALRD3Q5D0E6 543 aaKnown RBP16.07■□□□□ 0.16
SLIRP-211ENST00000557623 PPP1R42Q7Z4L9 355 aa16.07■□□□□ 0.16
SLIRP-211ENST00000557623 WWC3Q9ULE0 1092 aa16.07■□□□□ 0.16
SLIRP-211ENST00000557623 EXOSC9Q06265 439 aaKnown RBP16.06■□□□□ 0.16
SLIRP-211ENST00000557623 TCIRG1Q13488 830 aa16.06■□□□□ 0.16
SLIRP-211ENST00000557623 CCDC24Q8N4L8 307 aa16.06■□□□□ 0.16
SLIRP-211ENST00000557623 UBN2Q6ZU65 1347 aa16.05■□□□□ 0.16
SLIRP-211ENST00000557623 DDX58O95786 925 aaKnown RBP16.05■□□□□ 0.16
SLIRP-211ENST00000557623 YY1P25490 414 aa16.05■□□□□ 0.16
SLIRP-211ENST00000557623 SUSD4Q5VX71 490 aa16.05■□□□□ 0.16
SLIRP-211ENST00000557623 RIC3Q7Z5B4 369 aa16.05■□□□□ 0.16
SLIRP-211ENST00000557623 RNF123Q5XPI4 1314 aa16.04■□□□□ 0.16
SLIRP-211ENST00000557623 E9PSI1 815 aa16.04■□□□□ 0.16
SLIRP-211ENST00000557623 VAMP4O75379 141 aa16.04■□□□□ 0.16
SLIRP-211ENST00000557623 TTLL6Q8N841 843 aa16.04■□□□□ 0.16
SLIRP-211ENST00000557623 PHAXQ9H814 394 aaKnown RBP16.04■□□□□ 0.16
SLIRP-211ENST00000557623 RIC1Q4ADV7 1423 aa16.03■□□□□ 0.16
SLIRP-211ENST00000557623 NTSR2O95665 410 aa16.03■□□□□ 0.16
SLIRP-211ENST00000557623 STYK1Q6J9G0 422 aa16.03■□□□□ 0.16
SLIRP-211ENST00000557623 ZNF622Q969S3 477 aaKnown RBP eCLIP16.03■□□□□ 0.16
SLIRP-211ENST00000557623 MASTLQ96GX5 879 aa16.03■□□□□ 0.16
SLIRP-211ENST00000557623 UTP14AQ9BVJ6 771 aaKnown RBP16.03■□□□□ 0.16
SLIRP-211ENST00000557623 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
SLIRP-211ENST00000557623 TNRC6CQ9HCJ0 1690 aaKnown RBP16.02■□□□□ 0.16
SLIRP-211ENST00000557623 KLRG2A4D1S0 409 aaPredicted RBP16.02■□□□□ 0.16
SLIRP-211ENST00000557623 HAX1O00165 279 aa16.02■□□□□ 0.16
SLIRP-211ENST00000557623 SRGNP10124 158 aa16.02■□□□□ 0.16
SLIRP-211ENST00000557623 ERFEQ4G0M1 354 aa16.02■□□□□ 0.16
SLIRP-211ENST00000557623 NLRP10Q86W26 655 aa16.02■□□□□ 0.16
SLIRP-211ENST00000557623 NUTM1Q86Y26 1132 aa16.02■□□□□ 0.16
SLIRP-211ENST00000557623 CNKSR1Q969H4 720 aa16.02■□□□□ 0.16
SLIRP-211ENST00000557623 NPR1P16066 1061 aa16.01■□□□□ 0.15
SLIRP-211ENST00000557623 SLFN5Q08AF3 891 aa16.01■□□□□ 0.15
SLIRP-211ENST00000557623 ISCA1Q9BUE6 129 aa16.01■□□□□ 0.15
SLIRP-211ENST00000557623 SLX4Q8IY92 1834 aa16.01■□□□□ 0.15
SLIRP-211ENST00000557623 ABCC12Q96J65 1359 aa16■□□□□ 0.15
SLIRP-211ENST00000557623 LAMB2P55268 1798 aa16■□□□□ 0.15
SLIRP-211ENST00000557623 TCERG1O14776 1098 aaKnown RBP16■□□□□ 0.15
SLIRP-211ENST00000557623 TRIM28Q13263 835 aaKnown RBP16■□□□□ 0.15
SLIRP-211ENST00000557623 ARHGAP27Q6ZUM4 889 aa16■□□□□ 0.15
SLIRP-211ENST00000557623 SBF1O95248 1867 aa15.99■□□□□ 0.15
SLIRP-211ENST00000557623 CCDC88AQ3V6T2 1871 aa15.99■□□□□ 0.15
SLIRP-211ENST00000557623 SLC10A5Q5PT55 438 aa15.99■□□□□ 0.15
SLIRP-211ENST00000557623 KSR2Q6VAB6 950 aa15.99■□□□□ 0.15
SLIRP-211ENST00000557623 TRMT112Q9UI30 125 aaKnown RBP15.99■□□□□ 0.15
SLIRP-211ENST00000557623 DDX60Q8IY21 1712 aaKnown RBP15.99■□□□□ 0.15
SLIRP-211ENST00000557623 SH3TC1Q8TE82 1336 aa15.98■□□□□ 0.15
SLIRP-211ENST00000557623 ATP5J2-PTCD1G3V325 749 aa15.98■□□□□ 0.15
SLIRP-211ENST00000557623 ALDH1B1P30837 517 aa15.98■□□□□ 0.15
SLIRP-211ENST00000557623 MNX1P50219 401 aaPredicted RBP15.98■□□□□ 0.15
SLIRP-211ENST00000557623 FER1L6Q2WGJ9 1857 aa15.98■□□□□ 0.15
SLIRP-211ENST00000557623 NLRP3Q96P20 1036 aa15.98■□□□□ 0.15
SLIRP-211ENST00000557623 MYD88Q99836 296 aa15.98■□□□□ 0.15
SLIRP-211ENST00000557623 METTL22Q9BUU2 404 aaPredicted RBP15.98■□□□□ 0.15
SLIRP-211ENST00000557623 MAP3K2Q9Y2U5 619 aa15.98■□□□□ 0.15
SLIRP-211ENST00000557623 PI4KAP2A4QPH2 592 aa15.97■□□□□ 0.15
SLIRP-211ENST00000557623 NEXNQ0ZGT2 675 aa15.97■□□□□ 0.15
SLIRP-211ENST00000557623 FLIIQ13045 1269 aa15.97■□□□□ 0.15
SLIRP-211ENST00000557623 CRY2Q49AN0 593 aa15.97■□□□□ 0.15
SLIRP-211ENST00000557623 PI4KAP1Q8N8J0 262 aa15.97■□□□□ 0.15
SLIRP-211ENST00000557623 CCDC191Q8NCU4 936 aa15.97■□□□□ 0.15
SLIRP-211ENST00000557623 RPGRQ92834 1020 aaKnown RBP15.97■□□□□ 0.15
SLIRP-211ENST00000557623 HSP90B1P14625 803 aaKnown RBP15.96■□□□□ 0.15
SLIRP-211ENST00000557623 FKBP5Q13451 457 aaPredicted RBP15.96■□□□□ 0.15
SLIRP-211ENST00000557623 SOGA3Q5TF21 947 aa15.96■□□□□ 0.15
SLIRP-211ENST00000557623 PRPF40BQ6NWY9 871 aaKnown RBP15.96■□□□□ 0.15
SLIRP-211ENST00000557623 G2E3Q7L622 706 aa15.96■□□□□ 0.15
SLIRP-211ENST00000557623 TRMT2AQ8IZ69 625 aaKnown RBP15.96■□□□□ 0.15
SLIRP-211ENST00000557623 ZNF428Q96B54 188 aa15.96■□□□□ 0.15
SLIRP-211ENST00000557623 CDCA7LQ96GN5 454 aa15.96■□□□□ 0.15
SLIRP-211ENST00000557623 RBM17Q96I25 401 aaKnown RBP15.96■□□□□ 0.15
SLIRP-211ENST00000557623 GOLGB1Q14789 3259 aaKnown RBP15.95■□□□□ 0.14
SLIRP-211ENST00000557623 CWC25Q9NXE8 425 aaPredicted RBP15.95■□□□□ 0.14
SLIRP-211ENST00000557623 ADCY9O60503 1353 aa15.95■□□□□ 0.14
SLIRP-211ENST00000557623 UTRNP46939 3433 aa15.95■□□□□ 0.14
SLIRP-211ENST00000557623 MYH3P11055 1940 aa15.94■□□□□ 0.14
SLIRP-211ENST00000557623 DICER1Q9UPY3 1922 aaKnown RBP15.94■□□□□ 0.14
SLIRP-211ENST00000557623 C21orf2O43822 256 aa15.94■□□□□ 0.14
SLIRP-211ENST00000557623 HOXA10P31260 410 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms