RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 MRC1P22897 1456 aa27.19■■□□□ 1.94
RCCD1-208ENST00000557266 FOXD4L6Q3SYB3 417 aaPredicted RBP27.19■■□□□ 1.94
RCCD1-208ENST00000557266 EPHA10Q5JZY3 1008 aa27.19■■□□□ 1.94
RCCD1-208ENST00000557266 FOXD4L3Q6VB84 417 aaPredicted RBP27.19■■□□□ 1.94
RCCD1-208ENST00000557266 MYD88Q99836 296 aa27.19■■□□□ 1.94
RCCD1-208ENST00000557266 CCDC171Q6TFL3 1326 aa27.19■■□□□ 1.94
RCCD1-208ENST00000557266 SPATA31A3Q5VYP0 1347 aa27.18■■□□□ 1.94
RCCD1-208ENST00000557266 LARGE1O95461 756 aa27.18■■□□□ 1.94
RCCD1-208ENST00000557266 CABLES1Q8TDN4 633 aa27.18■■□□□ 1.94
RCCD1-208ENST00000557266 FAM227BQ96M60 508 aa27.18■■□□□ 1.94
RCCD1-208ENST00000557266 JAKMIP1Q96N16 626 aaKnown RBP27.18■■□□□ 1.94
RCCD1-208ENST00000557266 GDPD2Q9HCC8 539 aa27.18■■□□□ 1.94
RCCD1-208ENST00000557266 USP16Q9Y5T5 823 aa27.18■■□□□ 1.94
RCCD1-208ENST00000557266 CYP27B1O15528 508 aa27.17■■□□□ 1.94
RCCD1-208ENST00000557266 CSB-PGBD3P0DP91 1061 aa27.17■■□□□ 1.94
RCCD1-208ENST00000557266 NECTIN1Q15223 517 aa27.17■■□□□ 1.94
RCCD1-208ENST00000557266 TM6SF1Q9BZW5 370 aa27.17■■□□□ 1.94
RCCD1-208ENST00000557266 ZSWIM6Q9HCJ5 1215 aa27.17■■□□□ 1.94
RCCD1-208ENST00000557266 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.17■■□□□ 1.94
RCCD1-208ENST00000557266 NMIQ13287 307 aaPredicted RBP27.16■■□□□ 1.94
RCCD1-208ENST00000557266 VPS53Q5VIR6 699 aa27.16■■□□□ 1.94
RCCD1-208ENST00000557266 DCAF5Q96JK2 942 aa27.16■■□□□ 1.94
RCCD1-208ENST00000557266 SOS2Q07890 1332 aaPredicted RBP27.16■■□□□ 1.94
RCCD1-208ENST00000557266 SNRPA1P09661 255 aaKnown RBP27.16■■□□□ 1.94
RCCD1-208ENST00000557266 CHRNA2Q15822 529 aa27.16■■□□□ 1.94
RCCD1-208ENST00000557266 SNRKQ9NRH2 765 aa27.16■■□□□ 1.94
RCCD1-208ENST00000557266 PDRG1Q9NUG6 133 aa27.16■■□□□ 1.94
RCCD1-208ENST00000557266 HIP1O00291 1037 aa27.15■■□□□ 1.94
RCCD1-208ENST00000557266 GADD45BO75293 160 aaPredicted RBP27.15■■□□□ 1.94
RCCD1-208ENST00000557266 PIP4K2AP48426 406 aaPredicted RBP27.15■■□□□ 1.94
RCCD1-208ENST00000557266 ANKRD13DQ6ZTN6 518 aa27.15■■□□□ 1.94
RCCD1-208ENST00000557266 USP48Q86UV5 1035 aa27.15■■□□□ 1.94
RCCD1-208ENST00000557266 ZSCAN22P10073 491 aaPredicted RBP27.14■■□□□ 1.94
RCCD1-208ENST00000557266 BOLA2Q9H3K6 86 aa27.14■■□□□ 1.94
RCCD1-208ENST00000557266 RBM8AQ9Y5S9 174 aaKnown RBP27.14■■□□□ 1.94
RCCD1-208ENST00000557266 PLEKHG2Q9H7P9 1386 aa27.14■■□□□ 1.94
RCCD1-208ENST00000557266 SYT1P21579 422 aa27.14■■□□□ 1.93
RCCD1-208ENST00000557266 TTC5Q8N0Z6 440 aa27.14■■□□□ 1.93
RCCD1-208ENST00000557266 STX6O43752 255 aa27.13■■□□□ 1.93
RCCD1-208ENST00000557266 TMEM87AQ8NBN3 555 aa27.13■■□□□ 1.93
RCCD1-208ENST00000557266 MAP4K1Q92918 833 aa27.13■■□□□ 1.93
RCCD1-208ENST00000557266 SMC3Q9UQE7 1217 aa27.13■■□□□ 1.93
RCCD1-208ENST00000557266 CYP46A1Q9Y6A2 500 aa27.13■■□□□ 1.93
RCCD1-208ENST00000557266 CREB3L3Q68CJ9 461 aa27.13■■□□□ 1.93
RCCD1-208ENST00000557266 PDLIM2Q96JY6 352 aa27.13■■□□□ 1.93
RCCD1-208ENST00000557266 A0A0D9SFI3 127 aa27.12■■□□□ 1.93
RCCD1-208ENST00000557266 FMNL2Q96PY5 1086 aa27.12■■□□□ 1.93
RCCD1-208ENST00000557266 JARID2Q92833 1246 aaPredicted RBP27.11■■□□□ 1.93
RCCD1-208ENST00000557266 ZKSCAN1P17029 563 aaPredicted RBP27.11■■□□□ 1.93
RCCD1-208ENST00000557266 RFX5P48382 616 aaPredicted RBP27.11■■□□□ 1.93
RCCD1-208ENST00000557266 CCDC83Q8IWF9 413 aa27.11■■□□□ 1.93
RCCD1-208ENST00000557266 FSD1Q9BTV5 496 aa27.11■■□□□ 1.93
RCCD1-208ENST00000557266 COPRSQ9NQ92 184 aa27.11■■□□□ 1.93
RCCD1-208ENST00000557266 PKD1L3Q7Z443 1732 aa27.11■■□□□ 1.93
RCCD1-208ENST00000557266 MED23Q9ULK4 1368 aa27.1■■□□□ 1.93
RCCD1-208ENST00000557266 ST3GAL1Q11201 340 aa27.1■■□□□ 1.93
RCCD1-208ENST00000557266 DDX54Q8TDD1 881 aaKnown RBP27.1■■□□□ 1.93
RCCD1-208ENST00000557266 SYAP1Q96A49 352 aaPredicted RBP27.1■■□□□ 1.93
RCCD1-208ENST00000557266 ZSCAN31Q96LW9 406 aaPredicted RBP27.1■■□□□ 1.93
RCCD1-208ENST00000557266 SH2B1Q9NRF2 756 aaPredicted RBP27.1■■□□□ 1.93
RCCD1-208ENST00000557266 CNPY2Q9Y2B0 182 aa27.1■■□□□ 1.93
RCCD1-208ENST00000557266 ROBO1Q9Y6N7 1651 aa27.09■■□□□ 1.93
RCCD1-208ENST00000557266 ZSCAN30Q86W11 494 aa27.09■■□□□ 1.93
RCCD1-208ENST00000557266 GLI3P10071 1580 aa27.09■■□□□ 1.93
RCCD1-208ENST00000557266 SLC27A2O14975 620 aa27.08■■□□□ 1.93
RCCD1-208ENST00000557266 F13A1P00488 732 aa27.08■■□□□ 1.93
RCCD1-208ENST00000557266 KCNJ4P48050 445 aa27.08■■□□□ 1.93
RCCD1-208ENST00000557266 COL15A1P39059 1388 aa27.08■■□□□ 1.93
RCCD1-208ENST00000557266 GJB2P29033 226 aa27.08■■□□□ 1.93
RCCD1-208ENST00000557266 PTPN12Q05209 780 aaKnown RBP27.08■■□□□ 1.93
RCCD1-208ENST00000557266 COL9A3Q14050 684 aaPredicted RBP27.08■■□□□ 1.93
RCCD1-208ENST00000557266 RABL6Q3YEC7 729 aaPredicted RBP27.08■■□□□ 1.93
RCCD1-208ENST00000557266 UBE3BQ7Z3V4 1068 aa27.07■■□□□ 1.92
RCCD1-208ENST00000557266 ME3Q16798 604 aa27.07■■□□□ 1.92
RCCD1-208ENST00000557266 DTNBO60941 627 aa27.06■■□□□ 1.92
RCCD1-208ENST00000557266 CABP4P57796 275 aa27.06■■□□□ 1.92
RCCD1-208ENST00000557266 DBNLQ9UJU6 430 aaKnown RBP27.06■■□□□ 1.92
RCCD1-208ENST00000557266 CPDO75976 1380 aa27.06■■□□□ 1.92
RCCD1-208ENST00000557266 JCADQ9P266 1359 aa27.06■■□□□ 1.92
RCCD1-208ENST00000557266 ATP5J2-PTCD1G3V325 749 aa27.05■■□□□ 1.92
RCCD1-208ENST00000557266 PTCD1O75127 700 aaKnown RBP27.05■■□□□ 1.92
RCCD1-208ENST00000557266 ZNF589Q86UQ0 364 aaPredicted RBP27.05■■□□□ 1.92
RCCD1-208ENST00000557266 EDC3Q96F86 508 aaKnown RBP27.05■■□□□ 1.92
RCCD1-208ENST00000557266 TFCP2Q12800 502 aa27.05■■□□□ 1.92
RCCD1-208ENST00000557266 HS1BP3Q53T59 392 aa27.05■■□□□ 1.92
RCCD1-208ENST00000557266 TNNI3KQ59H18 835 aa27.05■■□□□ 1.92
RCCD1-208ENST00000557266 TSPY26PQ9H489 355 aa27.05■■□□□ 1.92
RCCD1-208ENST00000557266 FPGT-TNNI3KV9GXZ4 949 aa27.05■■□□□ 1.92
RCCD1-208ENST00000557266 ARFGEF2Q9Y6D5 1785 aa27.04■■□□□ 1.92
RCCD1-208ENST00000557266 TCHHQ07283 1943 aa27.04■■□□□ 1.92
RCCD1-208ENST00000557266 RNF214Q8ND24 703 aa27.04■■□□□ 1.92
RCCD1-208ENST00000557266 TPCN1Q9ULQ1 816 aa27.04■■□□□ 1.92
RCCD1-208ENST00000557266 MTMR6Q9Y217 621 aa27.04■■□□□ 1.92
RCCD1-208ENST00000557266 ATP5JP18859 108 aa27.04■■□□□ 1.92
RCCD1-208ENST00000557266 NAP1L5Q96NT1 182 aaPredicted RBP27.04■■□□□ 1.92
RCCD1-208ENST00000557266 TAF6LQ9Y6J9 622 aa27.04■■□□□ 1.92
RCCD1-208ENST00000557266 ABCA3Q99758 1704 aa27.03■■□□□ 1.92
RCCD1-208ENST00000557266 PHF14O94880 888 aa27.03■■□□□ 1.92
RCCD1-208ENST00000557266 PSMA5P28066 241 aa27.03■■□□□ 1.92
RCCD1-208ENST00000557266 CASP7P55210 303 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms