RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 FAM43AQ8N2R8 423 aa13.83□□□□□ -0.2
NEK9-210ENST00000557026 BAG6P46379 1132 aa13.83□□□□□ -0.2
NEK9-210ENST00000557026 PLVAPQ9BX97 442 aa13.83□□□□□ -0.2
NEK9-210ENST00000557026 ZSCAN12O43309 604 aa13.82□□□□□ -0.2
NEK9-210ENST00000557026 BRPF1P55201 1214 aaPredicted RBP13.82□□□□□ -0.2
NEK9-210ENST00000557026 ARHGEF6Q15052 776 aa13.82□□□□□ -0.2
NEK9-210ENST00000557026 C1orf115Q9H7X2 142 aa13.82□□□□□ -0.2
NEK9-210ENST00000557026 NEO1Q92859 1461 aa13.82□□□□□ -0.2
NEK9-210ENST00000557026 DKC1O60832 514 aaKnown RBP eCLIP13.82□□□□□ -0.2
NEK9-210ENST00000557026 ANAPC15P60006 121 aa13.82□□□□□ -0.2
NEK9-210ENST00000557026 IFI16Q16666 785 aaKnown RBP13.82□□□□□ -0.2
NEK9-210ENST00000557026 ZNF608Q9ULD9 1512 aaPredicted RBP13.82□□□□□ -0.2
NEK9-210ENST00000557026 USO1O60763 962 aaKnown RBP13.82□□□□□ -0.2
NEK9-210ENST00000557026 CCDC112Q8NEF3 446 aa13.82□□□□□ -0.2
NEK9-210ENST00000557026 TAOK3Q9H2K8 898 aa13.82□□□□□ -0.2
NEK9-210ENST00000557026 RTL9Q8NET4 1388 aa13.82□□□□□ -0.2
NEK9-210ENST00000557026 TMEM57Q8N5G2 664 aa13.82□□□□□ -0.2
NEK9-210ENST00000557026 MAP3K2Q9Y2U5 619 aa13.82□□□□□ -0.2
NEK9-210ENST00000557026 PIK3C2GO75747 1445 aa13.82□□□□□ -0.2
NEK9-210ENST00000557026 NEMFO60524 1076 aa13.81□□□□□ -0.2
NEK9-210ENST00000557026 CALML3P27482 149 aa13.81□□□□□ -0.2
NEK9-210ENST00000557026 IARSP41252 1262 aaKnown RBP13.81□□□□□ -0.2
NEK9-210ENST00000557026 TTC6Q86TZ1 520 aa13.81□□□□□ -0.2
NEK9-210ENST00000557026 SIRT1Q96EB6 747 aa13.81□□□□□ -0.2
NEK9-210ENST00000557026 PABPN1LA6NDY0 278 aaKnown RBP13.81□□□□□ -0.2
NEK9-210ENST00000557026 TRAK2O60296 914 aa13.81□□□□□ -0.2
NEK9-210ENST00000557026 MAP3K11Q16584 847 aa13.81□□□□□ -0.2
NEK9-210ENST00000557026 PIBF1Q8WXW3 757 aa13.81□□□□□ -0.2
NEK9-210ENST00000557026 IL1RAPL2Q9NP60 686 aa13.81□□□□□ -0.2
NEK9-210ENST00000557026 CFAP74Q9C0B2 1584 aa13.81□□□□□ -0.2
NEK9-210ENST00000557026 KSR2Q6VAB6 950 aa13.81□□□□□ -0.2
NEK9-210ENST00000557026 CCDC174Q6PII3 467 aa13.81□□□□□ -0.2
NEK9-210ENST00000557026 TTC12Q9H892 705 aaPredicted RBP13.81□□□□□ -0.2
NEK9-210ENST00000557026 LIMCH1Q9UPQ0 1083 aa13.81□□□□□ -0.2
NEK9-210ENST00000557026 CLEC11AQ9Y240 323 aa13.81□□□□□ -0.2
NEK9-210ENST00000557026 GIGYF2Q6Y7W6 1299 aaKnown RBP13.8□□□□□ -0.2
NEK9-210ENST00000557026 C8orf37Q96NL8 207 aa13.8□□□□□ -0.2
NEK9-210ENST00000557026 RTN4Q9NQC3 1192 aaKnown RBP13.8□□□□□ -0.2
NEK9-210ENST00000557026 TFCP2L1Q9NZI6 479 aa13.8□□□□□ -0.2
NEK9-210ENST00000557026 EMILIN1Q9Y6C2 1016 aa13.8□□□□□ -0.2
NEK9-210ENST00000557026 PRPF40AO75400 957 aaKnown RBP13.8□□□□□ -0.2
NEK9-210ENST00000557026 STK3Q13188 491 aa13.8□□□□□ -0.2
NEK9-210ENST00000557026 ATP2B3Q16720 1220 aa13.8□□□□□ -0.2
NEK9-210ENST00000557026 ZBTB3Q9H5J0 574 aa13.8□□□□□ -0.2
NEK9-210ENST00000557026 SEPT11Q9NVA2 429 aaKnown RBP13.8□□□□□ -0.2
NEK9-210ENST00000557026 KCNG1Q9UIX4 513 aa13.8□□□□□ -0.2
NEK9-210ENST00000557026 TBCAO75347 108 aaKnown RBP13.8□□□□□ -0.2
NEK9-210ENST00000557026 RARSP54136 660 aaKnown RBP13.8□□□□□ -0.2
NEK9-210ENST00000557026 TRAPPC3LQ5T215 181 aa13.8□□□□□ -0.2
NEK9-210ENST00000557026 MCM5P33992 734 aa13.8□□□□□ -0.2
NEK9-210ENST00000557026 DDX19AQ9NUU7 478 aaKnown RBP13.8□□□□□ -0.2
NEK9-210ENST00000557026 CCDC171Q6TFL3 1326 aa13.8□□□□□ -0.2
NEK9-210ENST00000557026 CACNA2D4Q7Z3S7 1137 aa13.79□□□□□ -0.2
NEK9-210ENST00000557026 KIAA1328Q86T90 577 aa13.79□□□□□ -0.2
NEK9-210ENST00000557026 MSANTD4Q8NCY6 345 aa13.79□□□□□ -0.2
NEK9-210ENST00000557026 BEGAINQ9BUH8 593 aa13.79□□□□□ -0.2
NEK9-210ENST00000557026 ZSCAN16Q9H4T2 348 aaPredicted RBP13.79□□□□□ -0.2
NEK9-210ENST00000557026 ZMYM3Q14202 1370 aa13.79□□□□□ -0.2
NEK9-210ENST00000557026 GOLGA6L9A6NEM1 432 aa13.79□□□□□ -0.2
NEK9-210ENST00000557026 STX6O43752 255 aa13.79□□□□□ -0.2
NEK9-210ENST00000557026 LINS1Q8NG48 757 aa13.79□□□□□ -0.2
NEK9-210ENST00000557026 CDCA7LQ96GN5 454 aa13.79□□□□□ -0.2
NEK9-210ENST00000557026 PRPHP41219 470 aa13.79□□□□□ -0.2
NEK9-210ENST00000557026 TMEM67Q5HYA8 995 aa13.79□□□□□ -0.2
NEK9-210ENST00000557026 BOLA2Q9H3K6 86 aa13.79□□□□□ -0.2
NEK9-210ENST00000557026 PPP1R2P41236 205 aa13.78□□□□□ -0.2
NEK9-210ENST00000557026 CCDC87Q9NVE4 849 aa13.78□□□□□ -0.2
NEK9-210ENST00000557026 NPATQ14207 1427 aa13.78□□□□□ -0.2
NEK9-210ENST00000557026 SPAG1Q07617 926 aa13.78□□□□□ -0.2
NEK9-210ENST00000557026 NAA16Q6N069 864 aaPredicted RBP13.78□□□□□ -0.2
NEK9-210ENST00000557026 C6orf50Q9HD87 102 aa13.78□□□□□ -0.2
NEK9-210ENST00000557026 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
NEK9-210ENST00000557026 UBA7P41226 1012 aa13.78□□□□□ -0.2
NEK9-210ENST00000557026 MAP9Q49MG5 647 aa13.78□□□□□ -0.2
NEK9-210ENST00000557026 ARHGAP29Q52LW3 1261 aa13.78□□□□□ -0.2
NEK9-210ENST00000557026 NIP7Q9Y221 180 aaKnown RBP eCLIP13.77□□□□□ -0.2
NEK9-210ENST00000557026 TSPY3P0CV98 308 aa13.77□□□□□ -0.2
NEK9-210ENST00000557026 TSPY8P0CW00 308 aa13.77□□□□□ -0.2
NEK9-210ENST00000557026 IP6K1Q92551 441 aa13.77□□□□□ -0.2
NEK9-210ENST00000557026 DENND2AQ9ULE3 1009 aa13.77□□□□□ -0.2
NEK9-210ENST00000557026 STAMBPO95630 424 aa13.77□□□□□ -0.21
NEK9-210ENST00000557026 GPTP24298 496 aa13.77□□□□□ -0.21
NEK9-210ENST00000557026 EIF6P56537 245 aaKnown RBP13.77□□□□□ -0.21
NEK9-210ENST00000557026 DZIP3Q86Y13 1208 aaKnown RBP13.77□□□□□ -0.21
NEK9-210ENST00000557026 SSH1Q8WYL5 1049 aa13.77□□□□□ -0.21
NEK9-210ENST00000557026 DDX11Q96FC9 970 aa13.77□□□□□ -0.21
NEK9-210ENST00000557026 EXOC6BQ9Y2D4 811 aa13.77□□□□□ -0.21
NEK9-210ENST00000557026 YEATS4O95619 227 aa13.77□□□□□ -0.21
NEK9-210ENST00000557026 NUTM1Q86Y26 1132 aa13.77□□□□□ -0.21
NEK9-210ENST00000557026 RAD50Q92878 1312 aa13.77□□□□□ -0.21
NEK9-210ENST00000557026 ADAMTS12P58397 1594 aa13.77□□□□□ -0.21
NEK9-210ENST00000557026 NAA15Q9BXJ9 866 aaKnown RBP13.77□□□□□ -0.21
NEK9-210ENST00000557026 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.77□□□□□ -0.21
NEK9-210ENST00000557026 TTC41PQ6P2S7 1318 aa13.76□□□□□ -0.21
NEK9-210ENST00000557026 WTAPQ15007 396 aa13.76□□□□□ -0.21
NEK9-210ENST00000557026 PRPF40BQ6NWY9 871 aaKnown RBP13.76□□□□□ -0.21
NEK9-210ENST00000557026 UBE3BQ7Z3V4 1068 aa13.76□□□□□ -0.21
NEK9-210ENST00000557026 EHBP1Q8NDI1 1231 aa13.76□□□□□ -0.21
NEK9-210ENST00000557026 PDCL2Q8N4E4 241 aa13.76□□□□□ -0.21
NEK9-210ENST00000557026 YTHDC2Q9H6S0 1430 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms