RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 RTKN2Q8IZC4 609 aa13.98□□□□□ -0.17
XRCC3-216ENST00000556682 NLRP3Q96P20 1036 aa13.98□□□□□ -0.17
XRCC3-216ENST00000556682 NMRK2Q9NPI5 230 aa13.98□□□□□ -0.17
XRCC3-216ENST00000556682 RNF123Q5XPI4 1314 aa13.97□□□□□ -0.17
XRCC3-216ENST00000556682 GLTPD2A6NH11 291 aa13.97□□□□□ -0.17
XRCC3-216ENST00000556682 NTSR2O95665 410 aa13.97□□□□□ -0.17
XRCC3-216ENST00000556682 CCDC27Q2M243 656 aa13.97□□□□□ -0.17
XRCC3-216ENST00000556682 CC2D2BQ6DHV5 1058 aa13.97□□□□□ -0.17
XRCC3-216ENST00000556682 PLBD2Q8NHP8 589 aa13.97□□□□□ -0.17
XRCC3-216ENST00000556682 RBM17Q96I25 401 aaKnown RBP13.97□□□□□ -0.17
XRCC3-216ENST00000556682 DLEC1Q9Y238 1755 aa13.96□□□□□ -0.17
XRCC3-216ENST00000556682 ANKRD31Q8N7Z5 1873 aa13.96□□□□□ -0.17
XRCC3-216ENST00000556682 HOXA10P31260 410 aaPredicted RBP13.96□□□□□ -0.17
XRCC3-216ENST00000556682 GRIPAP1Q4V328 841 aa13.96□□□□□ -0.17
XRCC3-216ENST00000556682 SLC10A5Q5PT55 438 aa13.96□□□□□ -0.17
XRCC3-216ENST00000556682 C7orf43Q8WVR3 580 aa13.96□□□□□ -0.17
XRCC3-216ENST00000556682 TMX4Q9H1E5 349 aaPredicted RBP13.96□□□□□ -0.17
XRCC3-216ENST00000556682 RRAGCQ9HB90 399 aa13.96□□□□□ -0.17
XRCC3-216ENST00000556682 ELL2O00472 640 aaPredicted RBP13.95□□□□□ -0.18
XRCC3-216ENST00000556682 VEGFAP15692 232 aaPredicted RBP13.95□□□□□ -0.18
XRCC3-216ENST00000556682 PRELPP51888 382 aa13.95□□□□□ -0.18
XRCC3-216ENST00000556682 NLRP10Q86W26 655 aa13.95□□□□□ -0.18
XRCC3-216ENST00000556682 CRAMP1Q96RY5 1269 aa13.95□□□□□ -0.18
XRCC3-216ENST00000556682 TRMT112Q9UI30 125 aaKnown RBP13.95□□□□□ -0.18
XRCC3-216ENST00000556682 RIC1Q4ADV7 1423 aa13.95□□□□□ -0.18
XRCC3-216ENST00000556682 ABCC12Q96J65 1359 aa13.95□□□□□ -0.18
XRCC3-216ENST00000556682 HSPA6P17066 643 aa13.94□□□□□ -0.18
XRCC3-216ENST00000556682 FKBP4Q02790 459 aaKnown RBP eCLIP13.94□□□□□ -0.18
XRCC3-216ENST00000556682 CCDC30Q5VVM6 783 aa13.94□□□□□ -0.18
XRCC3-216ENST00000556682 POTEDQ86YR6 584 aa13.94□□□□□ -0.18
XRCC3-216ENST00000556682 WWC1Q8IX03 1113 aa13.94□□□□□ -0.18
XRCC3-216ENST00000556682 RBM46Q8TBY0 533 aaKnown RBP13.94□□□□□ -0.18
XRCC3-216ENST00000556682 SH3TC1Q8TE82 1336 aa13.93□□□□□ -0.18
XRCC3-216ENST00000556682 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
XRCC3-216ENST00000556682 RIC3Q7Z5B4 369 aa13.93□□□□□ -0.18
XRCC3-216ENST00000556682 IL16Q14005 1332 aa13.92□□□□□ -0.18
XRCC3-216ENST00000556682 NUP98P52948 1817 aa13.92□□□□□ -0.18
XRCC3-216ENST00000556682 DDX58O95786 925 aaKnown RBP13.92□□□□□ -0.18
XRCC3-216ENST00000556682 C8orf58Q8NAV2 365 aa13.92□□□□□ -0.18
XRCC3-216ENST00000556682 COL11A2P13942 1736 aaPredicted RBP13.92□□□□□ -0.18
XRCC3-216ENST00000556682 PPEF1O14829 653 aaPredicted RBP13.91□□□□□ -0.18
XRCC3-216ENST00000556682 HSP90B1P14625 803 aaKnown RBP13.91□□□□□ -0.18
XRCC3-216ENST00000556682 FSTL1Q12841 308 aa13.91□□□□□ -0.18
XRCC3-216ENST00000556682 SYNE4Q8N205 404 aa13.91□□□□□ -0.18
XRCC3-216ENST00000556682 PSMD1Q99460 953 aa13.91□□□□□ -0.18
XRCC3-216ENST00000556682 ISCA1Q9BUE6 129 aa13.91□□□□□ -0.18
XRCC3-216ENST00000556682 STK31Q9BXU1 1019 aa13.91□□□□□ -0.18
XRCC3-216ENST00000556682 SLX4Q8IY92 1834 aa13.91□□□□□ -0.18
XRCC3-216ENST00000556682 ATP5J2-PTCD1G3V325 749 aa13.9□□□□□ -0.18
XRCC3-216ENST00000556682 BBOX1O75936 387 aa13.9□□□□□ -0.18
XRCC3-216ENST00000556682 HCLS1P14317 486 aaPredicted RBP13.9□□□□□ -0.18
XRCC3-216ENST00000556682 APLP1P51693 650 aa13.9□□□□□ -0.18
XRCC3-216ENST00000556682 TRIM28Q13263 835 aaKnown RBP13.9□□□□□ -0.18
XRCC3-216ENST00000556682 OLFM4Q6UX06 510 aa13.9□□□□□ -0.18
XRCC3-216ENST00000556682 DDX46Q7L014 1031 aaKnown RBP13.9□□□□□ -0.18
XRCC3-216ENST00000556682 WDR63Q8IWG1 891 aa13.9□□□□□ -0.18
XRCC3-216ENST00000556682 SMC1BQ8NDV3 1235 aa13.9□□□□□ -0.18
XRCC3-216ENST00000556682 JDP2Q8WYK2 163 aa13.9□□□□□ -0.18
XRCC3-216ENST00000556682 ZNF277Q9NRM2 450 aaPredicted RBP13.9□□□□□ -0.18
XRCC3-216ENST00000556682 SBF1O95248 1867 aa13.9□□□□□ -0.18
XRCC3-216ENST00000556682 IARSP41252 1262 aaKnown RBP13.89□□□□□ -0.19
XRCC3-216ENST00000556682 C3orf67Q6ZVT6 689 aa13.89□□□□□ -0.19
XRCC3-216ENST00000556682 FAM9BQ8IZU0 186 aa13.89□□□□□ -0.19
XRCC3-216ENST00000556682 TSR2Q969E8 191 aaKnown RBP13.89□□□□□ -0.19
XRCC3-216ENST00000556682 PHAXQ9H814 394 aaKnown RBP13.89□□□□□ -0.19
XRCC3-216ENST00000556682 IQCA1LA6NCM1 817 aa13.88□□□□□ -0.19
XRCC3-216ENST00000556682 TCERG1O14776 1098 aaKnown RBP13.88□□□□□ -0.19
XRCC3-216ENST00000556682 TWISTNBQ3B726 338 aaPredicted RBP13.88□□□□□ -0.19
XRCC3-216ENST00000556682 TSPYL6Q8N831 410 aa13.88□□□□□ -0.19
XRCC3-216ENST00000556682 SALL2Q9Y467 1007 aaPredicted RBP13.88□□□□□ -0.19
XRCC3-216ENST00000556682 ATP6V0A2Q9Y487 856 aa13.88□□□□□ -0.19
XRCC3-216ENST00000556682 DDNO94850 711 aaPredicted RBP13.87□□□□□ -0.19
XRCC3-216ENST00000556682 TMC4Q7Z404 712 aa13.87□□□□□ -0.19
XRCC3-216ENST00000556682 SUPT20HQ8NEM7 779 aa13.87□□□□□ -0.19
XRCC3-216ENST00000556682 FAM89AQ96GI7 184 aa13.87□□□□□ -0.19
XRCC3-216ENST00000556682 MYD88Q99836 296 aa13.87□□□□□ -0.19
XRCC3-216ENST00000556682 VPS33BQ9H267 617 aa13.87□□□□□ -0.19
XRCC3-216ENST00000556682 ABCC4O15439 1325 aa13.87□□□□□ -0.19
XRCC3-216ENST00000556682 FER1L6Q2WGJ9 1857 aa13.87□□□□□ -0.19
XRCC3-216ENST00000556682 ARFGEF2Q9Y6D5 1785 aa13.86□□□□□ -0.19
XRCC3-216ENST00000556682 EIF6P56537 245 aaKnown RBP13.86□□□□□ -0.19
XRCC3-216ENST00000556682 GRAPQ13588 217 aa13.86□□□□□ -0.19
XRCC3-216ENST00000556682 SF3B3Q15393 1217 aaKnown RBP13.86□□□□□ -0.19
XRCC3-216ENST00000556682 SP8Q8IXZ3 490 aa13.86□□□□□ -0.19
XRCC3-216ENST00000556682 ZBTB38Q8NAP3 1195 aaPredicted RBP13.86□□□□□ -0.19
XRCC3-216ENST00000556682 CCDC191Q8NCU4 936 aa13.86□□□□□ -0.19
XRCC3-216ENST00000556682 GRAPLQ8TC17 118 aaPredicted RBP13.86□□□□□ -0.19
XRCC3-216ENST00000556682 TNRC6CQ9HCJ0 1690 aaKnown RBP13.85□□□□□ -0.19
XRCC3-216ENST00000556682 FZD9O00144 591 aa13.85□□□□□ -0.19
XRCC3-216ENST00000556682 IRS4O14654 1257 aaPredicted RBP13.85□□□□□ -0.19
XRCC3-216ENST00000556682 SLC4A2P04920 1241 aa13.85□□□□□ -0.19
XRCC3-216ENST00000556682 NEXNQ0ZGT2 675 aa13.85□□□□□ -0.19
XRCC3-216ENST00000556682 KSR2Q6VAB6 950 aa13.85□□□□□ -0.19
XRCC3-216ENST00000556682 LARGE2Q8N3Y3 721 aa13.85□□□□□ -0.19
XRCC3-216ENST00000556682 ZNF428Q96B54 188 aa13.85□□□□□ -0.19
XRCC3-216ENST00000556682 L3MBTL3Q96JM7 780 aaPredicted RBP13.85□□□□□ -0.19
XRCC3-216ENST00000556682 METTL22Q9BUU2 404 aaPredicted RBP13.85□□□□□ -0.19
XRCC3-216ENST00000556682 CWC25Q9NXE8 425 aaPredicted RBP13.85□□□□□ -0.19
XRCC3-216ENST00000556682 POTECB2RU33 542 aa13.84□□□□□ -0.19
XRCC3-216ENST00000556682 RTL5Q5HYW3 569 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms