RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 TCIRG1Q13488 830 aa22.36■■□□□ 1.17
SDR39U1-220ENST00000556548 ECHDC1Q9NTX5 307 aa22.36■■□□□ 1.17
SDR39U1-220ENST00000556548 DOT1LQ8TEK3 1739 aa22.36■■□□□ 1.17
SDR39U1-220ENST00000556548 HLFQ16534 295 aa22.36■■□□□ 1.17
SDR39U1-220ENST00000556548 TUBGCP6Q96RT7 1819 aa22.36■■□□□ 1.17
SDR39U1-220ENST00000556548 BARGINQ6ZT62 677 aa22.35■■□□□ 1.17
SDR39U1-220ENST00000556548 UBE2Q2Q8WVN8 375 aa22.35■■□□□ 1.17
SDR39U1-220ENST00000556548 IL25Q9H293 177 aa22.35■■□□□ 1.17
SDR39U1-220ENST00000556548 COPRSQ9NQ92 184 aa22.35■■□□□ 1.17
SDR39U1-220ENST00000556548 LRP6O75581 1613 aa22.35■■□□□ 1.17
SDR39U1-220ENST00000556548 TTC41PQ6P2S7 1318 aa22.35■■□□□ 1.17
SDR39U1-220ENST00000556548 GLRX3O76003 335 aaKnown RBP22.35■■□□□ 1.17
SDR39U1-220ENST00000556548 GPTP24298 496 aa22.35■■□□□ 1.17
SDR39U1-220ENST00000556548 ISCA1Q9BUE6 129 aa22.35■■□□□ 1.17
SDR39U1-220ENST00000556548 KCNQ2O43526 872 aa22.34■■□□□ 1.17
SDR39U1-220ENST00000556548 TFCP2Q12800 502 aa22.34■■□□□ 1.17
SDR39U1-220ENST00000556548 CNTROBQ8N137 903 aa22.34■■□□□ 1.17
SDR39U1-220ENST00000556548 GPATCH3Q96I76 525 aa22.34■■□□□ 1.17
SDR39U1-220ENST00000556548 ANO2Q9NQ90 1003 aa22.34■■□□□ 1.17
SDR39U1-220ENST00000556548 USP42Q9H9J4 1324 aaKnown RBP22.34■■□□□ 1.17
SDR39U1-220ENST00000556548 JCADQ9P266 1359 aa22.33■■□□□ 1.17
SDR39U1-220ENST00000556548 SNX21Q969T3 373 aa22.33■■□□□ 1.17
SDR39U1-220ENST00000556548 FAM89AQ96GI7 184 aa22.33■■□□□ 1.17
SDR39U1-220ENST00000556548 TBC1D2BQ9UPU7 963 aa22.33■■□□□ 1.17
SDR39U1-220ENST00000556548 MAP3K15Q6ZN16 1313 aa22.33■■□□□ 1.16
SDR39U1-220ENST00000556548 CCDC85AQ96PX6 553 aaPredicted RBP22.32■■□□□ 1.16
SDR39U1-220ENST00000556548 COL15A1P39059 1388 aa22.32■■□□□ 1.16
SDR39U1-220ENST00000556548 ATP6V1AP38606 617 aa22.32■■□□□ 1.16
SDR39U1-220ENST00000556548 NFKBIBQ15653 356 aa22.32■■□□□ 1.16
SDR39U1-220ENST00000556548 ANTXR1Q9H6X2 564 aa22.32■■□□□ 1.16
SDR39U1-220ENST00000556548 SYNE4Q8N205 404 aa22.31■■□□□ 1.16
SDR39U1-220ENST00000556548 ZNF594Q96JF6 807 aaPredicted RBP22.31■■□□□ 1.16
SDR39U1-220ENST00000556548 BCL9LQ86UU0 1499 aa22.31■■□□□ 1.16
SDR39U1-220ENST00000556548 NWD2Q9ULI1 1742 aa22.31■■□□□ 1.16
SDR39U1-220ENST00000556548 GIGYF2Q6Y7W6 1299 aaKnown RBP22.3■■□□□ 1.16
SDR39U1-220ENST00000556548 BOLA2Q9H3K6 86 aa22.3■■□□□ 1.16
SDR39U1-220ENST00000556548 FOXD4L1Q9NU39 408 aa22.3■■□□□ 1.16
SDR39U1-220ENST00000556548 TJP1Q07157 1748 aa22.3■■□□□ 1.16
SDR39U1-220ENST00000556548 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.3■■□□□ 1.16
SDR39U1-220ENST00000556548 CWC27Q6UX04 472 aaKnown RBP22.29■■□□□ 1.16
SDR39U1-220ENST00000556548 LOC102724428A0A0B4J2F2 783 aa22.29■■□□□ 1.16
SDR39U1-220ENST00000556548 SIK1P57059 783 aa22.29■■□□□ 1.16
SDR39U1-220ENST00000556548 VPS72Q15906 364 aa22.29■■□□□ 1.16
SDR39U1-220ENST00000556548 RABEP1Q15276 862 aa22.28■■□□□ 1.16
SDR39U1-220ENST00000556548 TNNI3KQ59H18 835 aa22.28■■□□□ 1.16
SDR39U1-220ENST00000556548 DZIP3Q86Y13 1208 aaKnown RBP22.28■■□□□ 1.16
SDR39U1-220ENST00000556548 FPGT-TNNI3KV9GXZ4 949 aa22.28■■□□□ 1.16
SDR39U1-220ENST00000556548 USP21Q9UK80 565 aa22.28■■□□□ 1.16
SDR39U1-220ENST00000556548 ITPK1Q13572 414 aa22.27■■□□□ 1.16
SDR39U1-220ENST00000556548 FRAT2O75474 233 aaPredicted RBP22.26■■□□□ 1.15
SDR39U1-220ENST00000556548 CRKLP46109 303 aaKnown RBP22.26■■□□□ 1.15
SDR39U1-220ENST00000556548 TRIM28Q13263 835 aaKnown RBP22.26■■□□□ 1.15
SDR39U1-220ENST00000556548 LRRC24Q50LG9 513 aa22.26■■□□□ 1.15
SDR39U1-220ENST00000556548 DBNLQ9UJU6 430 aaKnown RBP22.26■■□□□ 1.15
SDR39U1-220ENST00000556548 PALD1Q9ULE6 856 aa22.26■■□□□ 1.15
SDR39U1-220ENST00000556548 IL6STP40189 918 aaPredicted RBP22.26■■□□□ 1.15
SDR39U1-220ENST00000556548 INTS5Q6P9B9 1019 aaKnown RBP22.26■■□□□ 1.15
SDR39U1-220ENST00000556548 NLRP10Q86W26 655 aa22.26■■□□□ 1.15
SDR39U1-220ENST00000556548 K7ELQ4 463 aaPredicted RBP22.25■■□□□ 1.15
SDR39U1-220ENST00000556548 FAM182BQ5T319 152 aa22.25■■□□□ 1.15
SDR39U1-220ENST00000556548 ATG9AQ7Z3C6 839 aa22.25■■□□□ 1.15
SDR39U1-220ENST00000556548 ZBTB38Q8NAP3 1195 aaPredicted RBP22.25■■□□□ 1.15
SDR39U1-220ENST00000556548 PALLDQ8WX93 1383 aa22.25■■□□□ 1.15
SDR39U1-220ENST00000556548 PCCAP05165 728 aaPredicted RBP22.25■■□□□ 1.15
SDR39U1-220ENST00000556548 KCNQ4P56696 695 aa22.25■■□□□ 1.15
SDR39U1-220ENST00000556548 FNBP4Q8N3X1 1017 aaPredicted RBP22.25■■□□□ 1.15
SDR39U1-220ENST00000556548 PUS3Q9BZE2 481 aaKnown RBP22.25■■□□□ 1.15
SDR39U1-220ENST00000556548 DIAPH3Q9NSV4 1193 aa22.25■■□□□ 1.15
SDR39U1-220ENST00000556548 NDUFB9Q9Y6M9 179 aa22.25■■□□□ 1.15
SDR39U1-220ENST00000556548 SGSM2O43147 1006 aa22.24■■□□□ 1.15
SDR39U1-220ENST00000556548 HSP90AA1P07900 732 aaKnown RBP22.24■■□□□ 1.15
SDR39U1-220ENST00000556548 PTF1AQ7RTS3 328 aa22.24■■□□□ 1.15
SDR39U1-220ENST00000556548 EDC3Q96F86 508 aaKnown RBP22.24■■□□□ 1.15
SDR39U1-220ENST00000556548 DBNDD2Q9BQY9 259 aa22.24■■□□□ 1.15
SDR39U1-220ENST00000556548 CCDC87Q9NVE4 849 aa22.24■■□□□ 1.15
SDR39U1-220ENST00000556548 CERKQ8TCT0 537 aa22.24■■□□□ 1.15
SDR39U1-220ENST00000556548 EVI5LQ96CN4 794 aa22.24■■□□□ 1.15
SDR39U1-220ENST00000556548 AK9Q5TCS8 1911 aa22.24■■□□□ 1.15
SDR39U1-220ENST00000556548 NEUROD6Q96NK8 337 aa22.23■■□□□ 1.15
SDR39U1-220ENST00000556548 CCDC57Q2TAC2 916 aa22.23■■□□□ 1.15
SDR39U1-220ENST00000556548 MEX3CQ5U5Q3 659 aaKnown RBP22.23■■□□□ 1.15
SDR39U1-220ENST00000556548 FAM177BA6PVY3 158 aa22.22■■□□□ 1.15
SDR39U1-220ENST00000556548 MCCP23508 829 aa22.22■■□□□ 1.15
SDR39U1-220ENST00000556548 EIF5P55010 431 aaKnown RBP22.22■■□□□ 1.15
SDR39U1-220ENST00000556548 TIMM10P62072 90 aa22.22■■□□□ 1.15
SDR39U1-220ENST00000556548 HSP90AB3PQ58FF7 597 aa22.22■■□□□ 1.15
SDR39U1-220ENST00000556548 AEBP2Q6ZN18 517 aaPredicted RBP22.22■■□□□ 1.15
SDR39U1-220ENST00000556548 TRMT112Q9UI30 125 aaKnown RBP22.22■■□□□ 1.15
SDR39U1-220ENST00000556548 EYA2O00167 538 aa22.21■■□□□ 1.15
SDR39U1-220ENST00000556548 HSPA1LP34931 641 aa22.21■■□□□ 1.15
SDR39U1-220ENST00000556548 SPATA31A6Q5VVP1 1343 aa22.2■■□□□ 1.14
SDR39U1-220ENST00000556548 UBN2Q6ZU65 1347 aa22.2■■□□□ 1.14
SDR39U1-220ENST00000556548 IL15P40933 162 aaPredicted RBP22.2■■□□□ 1.14
SDR39U1-220ENST00000556548 FAM227BQ96M60 508 aa22.2■■□□□ 1.14
SDR39U1-220ENST00000556548 FSD1Q9BTV5 496 aa22.2■■□□□ 1.14
SDR39U1-220ENST00000556548 ERVV-1B6SEH8 477 aa22.19■■□□□ 1.14
SDR39U1-220ENST00000556548 DNAJC2Q99543 621 aaKnown RBP22.19■■□□□ 1.14
SDR39U1-220ENST00000556548 NEK4P51957 841 aa22.19■■□□□ 1.14
SDR39U1-220ENST00000556548 TAF7LQ5H9L4 462 aa22.19■■□□□ 1.14
SDR39U1-220ENST00000556548 KIAA1211Q6ZU35 1233 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms