RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 KCPQ6ZWJ8 1503 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 JCADQ9P266 1359 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 TOGARAM1Q9Y4F4 1720 aa6.53□□□□□ -1.36
GPHN-213ENST00000556501 ERBB4Q15303 1308 aa6.52□□□□□ -1.37
GPHN-213ENST00000556501 NHSL1Q5SYE7 1610 aa6.52□□□□□ -1.37
GPHN-213ENST00000556501 NEURL1BA8MQ27 555 aa6.52□□□□□ -1.37
GPHN-213ENST00000556501 IGKV5-2P06315 115 aa6.52□□□□□ -1.37
GPHN-213ENST00000556501 IFIT2P09913 472 aaKnown RBP6.52□□□□□ -1.37
GPHN-213ENST00000556501 NEXNQ0ZGT2 675 aa6.52□□□□□ -1.37
GPHN-213ENST00000556501 LRP10Q7Z4F1 713 aa6.52□□□□□ -1.37
GPHN-213ENST00000556501 XAGE3Q8WTP9 111 aa6.52□□□□□ -1.37
GPHN-213ENST00000556501 KCNB2Q92953 911 aa6.52□□□□□ -1.37
GPHN-213ENST00000556501 ZNF496Q96IT1 587 aaPredicted RBP6.52□□□□□ -1.37
GPHN-213ENST00000556501 METTL22Q9BUU2 404 aaPredicted RBP6.52□□□□□ -1.37
GPHN-213ENST00000556501 UPF3BQ9BZI7 483 aaKnown RBP6.52□□□□□ -1.37
GPHN-213ENST00000556501 BICC1Q9H694 974 aaKnown RBP6.52□□□□□ -1.37
GPHN-213ENST00000556501 SNRKQ9NRH2 765 aa6.52□□□□□ -1.37
GPHN-213ENST00000556501 DIAPH3Q9NSV4 1193 aa6.52□□□□□ -1.37
GPHN-213ENST00000556501 RYDENQ9NUL5 291 aaKnown RBP6.52□□□□□ -1.37
GPHN-213ENST00000556501 PA2G4Q9UQ80 394 aaKnown RBP6.52□□□□□ -1.37
GPHN-213ENST00000556501 RFX7Q2KHR2 1363 aa6.52□□□□□ -1.37
GPHN-213ENST00000556501 COL5A2P05997 1499 aaPredicted RBP6.52□□□□□ -1.37
GPHN-213ENST00000556501 STRCQ7RTU9 1775 aa6.52□□□□□ -1.37
GPHN-213ENST00000556501 TNS2Q63HR2 1409 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 HIP1O00291 1037 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 CYP27B1O15528 508 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 SASH1O94885 1247 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 MBD3O95983 291 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 SNRPA1P09661 255 aaKnown RBP6.51□□□□□ -1.37
GPHN-213ENST00000556501 CSB-PGBD3P0DP91 1061 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 G3BP1Q13283 466 aaKnown RBP eCLIP6.51□□□□□ -1.37
GPHN-213ENST00000556501 SLC39A6Q13433 755 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 GCKRQ14397 625 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 KIAA1211Q6ZU35 1233 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 RIC3Q7Z5B4 369 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 AACSQ86V21 672 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 REM2Q8IYK8 340 aaPredicted RBP6.51□□□□□ -1.37
GPHN-213ENST00000556501 PIP4P2Q8N4L2 257 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 EVI5LQ96CN4 794 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 FMNL2Q96PY5 1086 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 TM6SF1Q9BZW5 370 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 RPAP1Q9BWH6 1393 aaPredicted RBP6.51□□□□□ -1.37
GPHN-213ENST00000556501 MED23Q9ULK4 1368 aa6.51□□□□□ -1.37
GPHN-213ENST00000556501 CCDC171Q6TFL3 1326 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 WDR33Q9C0J8 1336 aaKnown RBP6.5□□□□□ -1.37
GPHN-213ENST00000556501 SPEF2Q9C093 1822 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 PLCH1Q4KWH8 1693 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 AIMP1Q12904 312 aaKnown RBP6.5□□□□□ -1.37
GPHN-213ENST00000556501 ZSCAN23Q3MJ62 389 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 RABL6Q3YEC7 729 aaPredicted RBP6.5□□□□□ -1.37
GPHN-213ENST00000556501 CAVIN1Q6NZI2 390 aaKnown RBP6.5□□□□□ -1.37
GPHN-213ENST00000556501 CWC27Q6UX04 472 aaKnown RBP6.5□□□□□ -1.37
GPHN-213ENST00000556501 NOL8Q76FK4 1167 aaKnown RBP6.5□□□□□ -1.37
GPHN-213ENST00000556501 RUFY3Q7L099 469 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 RASEFQ8IZ41 740 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 TTC5Q8N0Z6 440 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 NFATC2IPQ8NCF5 419 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 GPT2Q8TD30 523 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 DDX17Q92841 729 aaKnown RBP6.5□□□□□ -1.37
GPHN-213ENST00000556501 EAF2Q96CJ1 260 aaPredicted RBP6.5□□□□□ -1.37
GPHN-213ENST00000556501 MYD88Q99836 296 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 COPRSQ9NQ92 184 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 RRAGDQ9NQL2 400 aaPredicted RBP6.5□□□□□ -1.37
GPHN-213ENST00000556501 WNK3Q9BYP7 1800 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 WDR17Q8IZU2 1322 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 PCDH11XQ9BZA7 1347 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 PCDH11YQ9BZA8 1340 aa6.5□□□□□ -1.37
GPHN-213ENST00000556501 PRPF40AO75400 957 aaKnown RBP6.49□□□□□ -1.37
GPHN-213ENST00000556501 MYL6BP14649 208 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 RFX5P48382 616 aaPredicted RBP6.49□□□□□ -1.37
GPHN-213ENST00000556501 NASPP49321 788 aaPredicted RBP6.49□□□□□ -1.37
GPHN-213ENST00000556501 AK2P54819 239 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 PTH1RQ03431 593 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 CCDC173Q0VFZ6 552 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 NMIQ13287 307 aaPredicted RBP6.49□□□□□ -1.37
GPHN-213ENST00000556501 CHRNA2Q15822 529 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 EPHA10Q5JZY3 1008 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 VPS53Q5VIR6 699 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 BRINP3Q76B58 766 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 COPS6Q7L5N1 327 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 HOMEZQ8IX15 550 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 TMEM87AQ8NBN3 555 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 CABLES1Q8TDN4 633 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 PPP1R9BQ96SB3 815 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 TLR7Q9NYK1 1049 aaKnown RBP6.49□□□□□ -1.37
GPHN-213ENST00000556501 LIMCH1Q9UPQ0 1083 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.49□□□□□ -1.37
GPHN-213ENST00000556501 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.49□□□□□ -1.37
GPHN-213ENST00000556501 ANKRD36CQ5JPF3 1778 aa6.49□□□□□ -1.37
GPHN-213ENST00000556501 LRP6O75581 1613 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 KDM4FA0A1W2PPD8 638 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 CHRM1P11229 460 aaPredicted RBP6.48□□□□□ -1.37
GPHN-213ENST00000556501 NCLP19338 710 aaKnown RBP6.48□□□□□ -1.37
GPHN-213ENST00000556501 CASTP20810 708 aaKnown RBP6.48□□□□□ -1.37
GPHN-213ENST00000556501 CLCN1P35523 988 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 CASP7P55210 303 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 CABP4P57796 275 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 NECTIN1Q15223 517 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 ANKRD13DQ6ZTN6 518 aa6.48□□□□□ -1.37
GPHN-213ENST00000556501 PLBD2Q8NHP8 589 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms