RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 SWI5Q1ZZU3 235 aa7.55□□□□□ -1.2
TDP1-215ENST00000556498 HSP90AB2PQ58FF8 381 aa7.55□□□□□ -1.2
TDP1-215ENST00000556498 CREBRFQ8IUR6 639 aa7.55□□□□□ -1.2
TDP1-215ENST00000556498 HPS1Q92902 700 aa7.55□□□□□ -1.2
TDP1-215ENST00000556498 NUCKS1Q9H1E3 243 aaKnown RBP7.55□□□□□ -1.2
TDP1-215ENST00000556498 TMX4Q9H1E5 349 aaPredicted RBP7.55□□□□□ -1.2
TDP1-215ENST00000556498 ZFAND3Q9H8U3 227 aa7.55□□□□□ -1.2
TDP1-215ENST00000556498 CALCOCO1Q9P1Z2 691 aa7.55□□□□□ -1.2
TDP1-215ENST00000556498 ISY1Q9ULR0 285 aaKnown RBP7.55□□□□□ -1.2
TDP1-215ENST00000556498 PDZRN3Q9UPQ7 1066 aa7.55□□□□□ -1.2
TDP1-215ENST00000556498 ANKRD62A6NC57 917 aa7.54□□□□□ -1.2
TDP1-215ENST00000556498 M0R2N6 131 aa7.54□□□□□ -1.2
TDP1-215ENST00000556498 TULP2O00295 520 aa7.54□□□□□ -1.2
TDP1-215ENST00000556498 STAU1O95793 577 aaKnown RBP7.54□□□□□ -1.2
TDP1-215ENST00000556498 GDF10P55107 478 aa7.54□□□□□ -1.2
TDP1-215ENST00000556498 KIAA2012Q0VF49 1180 aa7.54□□□□□ -1.2
TDP1-215ENST00000556498 CBLBQ13191 982 aa7.54□□□□□ -1.2
TDP1-215ENST00000556498 ZFYVE27Q5T4F4 411 aa7.54□□□□□ -1.2
TDP1-215ENST00000556498 GET4Q7L5D6 327 aaPredicted RBP7.54□□□□□ -1.2
TDP1-215ENST00000556498 KDF1Q8NAX2 398 aaPredicted RBP7.54□□□□□ -1.2
TDP1-215ENST00000556498 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.54□□□□□ -1.2
TDP1-215ENST00000556498 ERCC4Q92889 916 aaPredicted RBP7.54□□□□□ -1.2
TDP1-215ENST00000556498 CLP1Q92989 425 aaKnown RBP7.54□□□□□ -1.2
TDP1-215ENST00000556498 SLC26A8Q96RN1 970 aa7.54□□□□□ -1.2
TDP1-215ENST00000556498 ZNF358Q9NW07 568 aa7.54□□□□□ -1.2
TDP1-215ENST00000556498 SLAIN2Q9P270 581 aa7.54□□□□□ -1.2
TDP1-215ENST00000556498 PAXBP1Q9Y5B6 917 aa7.54□□□□□ -1.2
TDP1-215ENST00000556498 RAD50Q92878 1312 aa7.53□□□□□ -1.2
TDP1-215ENST00000556498 INHAP05111 366 aa7.53□□□□□ -1.2
TDP1-215ENST00000556498 TPM3P06753 285 aa7.53□□□□□ -1.2
TDP1-215ENST00000556498 ADH1AP07327 375 aa7.53□□□□□ -1.2
TDP1-215ENST00000556498 TNNT3P45378 269 aaPredicted RBP7.53□□□□□ -1.2
TDP1-215ENST00000556498 GTF2A1P52655 376 aaPredicted RBP7.53□□□□□ -1.2
TDP1-215ENST00000556498 RGL3Q3MIN7 710 aa7.53□□□□□ -1.2
TDP1-215ENST00000556498 ZC3H12AQ5D1E8 599 aaKnown RBP7.53□□□□□ -1.2
TDP1-215ENST00000556498 RANBP17Q9H2T7 1088 aaKnown RBP7.53□□□□□ -1.2
TDP1-215ENST00000556498 ETNK1Q9HBU6 452 aa7.53□□□□□ -1.2
TDP1-215ENST00000556498 METTL14Q9HCE5 456 aaKnown RBP7.53□□□□□ -1.2
TDP1-215ENST00000556498 CGNQ9P2M7 1197 aaKnown RBP7.53□□□□□ -1.2
TDP1-215ENST00000556498 NINLQ9Y2I6 1382 aa7.53□□□□□ -1.2
TDP1-215ENST00000556498 SH3BP5O60239 455 aa7.52□□□□□ -1.21
TDP1-215ENST00000556498 PPFIA4O75335 1185 aa7.52□□□□□ -1.21
TDP1-215ENST00000556498 EIF3JO75822 258 aaKnown RBP7.52□□□□□ -1.21
TDP1-215ENST00000556498 RHBDL3P58872 404 aa7.52□□□□□ -1.21
TDP1-215ENST00000556498 ESCO1Q5FWF5 840 aa7.52□□□□□ -1.21
TDP1-215ENST00000556498 LRCH2Q5VUJ6 765 aa7.52□□□□□ -1.21
TDP1-215ENST00000556498 KLHL10Q6JEL2 608 aa7.52□□□□□ -1.21
TDP1-215ENST00000556498 JMYQ8N9B5 988 aa7.52□□□□□ -1.21
TDP1-215ENST00000556498 TSEN2Q8NCE0 465 aaKnown RBP7.52□□□□□ -1.21
TDP1-215ENST00000556498 DCAF11Q8TEB1 546 aa7.52□□□□□ -1.21
TDP1-215ENST00000556498 SLC4A9Q96Q91 983 aa7.52□□□□□ -1.21
TDP1-215ENST00000556498 RPGRIP1LQ68CZ1 1315 aa7.52□□□□□ -1.21
TDP1-215ENST00000556498 CCDC196A0A1B0GTZ2 297 aa7.51□□□□□ -1.21
TDP1-215ENST00000556498 BACH1O14867 736 aa7.51□□□□□ -1.21
TDP1-215ENST00000556498 CCP110O43303 1012 aa7.51□□□□□ -1.21
TDP1-215ENST00000556498 FAM200BP0CF97 657 aa7.51□□□□□ -1.21
TDP1-215ENST00000556498 PTGIRP43119 386 aa7.51□□□□□ -1.21
TDP1-215ENST00000556498 KCNJ4P48050 445 aa7.51□□□□□ -1.21
TDP1-215ENST00000556498 TBC1D10BQ4KMP7 808 aaPredicted RBP7.51□□□□□ -1.21
TDP1-215ENST00000556498 CT47A1Q5JQC4 288 aaPredicted RBP7.51□□□□□ -1.21
TDP1-215ENST00000556498 SMC5Q8IY18 1101 aa7.51□□□□□ -1.21
TDP1-215ENST00000556498 BORCS6Q96GS4 357 aa7.51□□□□□ -1.21
TDP1-215ENST00000556498 XAGE2Q96GT9 111 aa7.51□□□□□ -1.21
TDP1-215ENST00000556498 CFAP53Q96M91 514 aa7.51□□□□□ -1.21
TDP1-215ENST00000556498 HINFPQ9BQA5 517 aa7.51□□□□□ -1.21
TDP1-215ENST00000556498 ARHGEF10LQ9HCE6 1279 aa7.51□□□□□ -1.21
TDP1-215ENST00000556498 CWC25Q9NXE8 425 aaPredicted RBP7.51□□□□□ -1.21
TDP1-215ENST00000556498 RAD54L2Q9Y4B4 1467 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 A0A1W2PRU2 124 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 OFD1O75665 1012 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 ITGAEP38570 1179 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 HMGN5P82970 282 aaKnown RBP7.5□□□□□ -1.21
TDP1-215ENST00000556498 SARNPP82979 210 aaKnown RBP7.5□□□□□ -1.21
TDP1-215ENST00000556498 NEXNQ0ZGT2 675 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 B4GALNT3Q6L9W6 998 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 PHLDB3Q6NSJ2 640 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 CLEC4GQ6UXB4 293 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 KIAA1211Q6ZU35 1233 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 ATL2Q8NHH9 583 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 MICAL1Q8TDZ2 1067 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 AGBL1Q96MI9 1066 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 TEX13AQ9BXU3 409 aaPredicted RBP7.5□□□□□ -1.21
TDP1-215ENST00000556498 RAB6BQ9NRW1 208 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 SERTAD1Q9UHV2 236 aa7.5□□□□□ -1.21
TDP1-215ENST00000556498 CREB3O43889 395 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 IL2RAP01589 272 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 CASQ1P31415 396 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 EPHA4P54764 986 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 GABPB1Q06547 395 aaPredicted RBP7.49□□□□□ -1.21
TDP1-215ENST00000556498 CLN3Q13286 438 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 NFKBIBQ15653 356 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 OCLNQ16625 522 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 C11orf91Q3C1V1 193 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 TNS4Q8IZW8 715 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 MEIOBQ8N635 442 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 CNKSR1Q969H4 720 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 ESYT1Q9BSJ8 1104 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 HRH3Q9Y5N1 445 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 COMMD10Q9Y6G5 202 aa7.49□□□□□ -1.21
TDP1-215ENST00000556498 CFAP65Q6ZU64 1925 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms