RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 PCCAP05165 728 aaPredicted RBP13.44□□□□□ -0.26
LINC01550-206ENST00000556462 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
LINC01550-206ENST00000556462 AMIGO3Q86WK7 504 aa13.44□□□□□ -0.26
LINC01550-206ENST00000556462 ZBTB38Q8NAP3 1195 aaPredicted RBP13.44□□□□□ -0.26
LINC01550-206ENST00000556462 UBN2Q6ZU65 1347 aa13.43□□□□□ -0.26
LINC01550-206ENST00000556462 PROM2Q8N271 834 aa13.43□□□□□ -0.26
LINC01550-206ENST00000556462 FAM89AQ96GI7 184 aa13.43□□□□□ -0.26
LINC01550-206ENST00000556462 BACH2Q9BYV9 841 aa13.43□□□□□ -0.26
LINC01550-206ENST00000556462 LRRCC1Q9C099 1032 aa13.43□□□□□ -0.26
LINC01550-206ENST00000556462 PA2G4Q9UQ80 394 aaKnown RBP13.43□□□□□ -0.26
LINC01550-206ENST00000556462 NUP98P52948 1817 aa13.43□□□□□ -0.26
LINC01550-206ENST00000556462 GNPATO15228 680 aa13.43□□□□□ -0.26
LINC01550-206ENST00000556462 RAB11FIP3O75154 756 aa13.43□□□□□ -0.26
LINC01550-206ENST00000556462 SLC27A3Q5K4L6 730 aa13.43□□□□□ -0.26
LINC01550-206ENST00000556462 PLEKHM2Q8IWE5 1019 aa13.43□□□□□ -0.26
LINC01550-206ENST00000556462 RFX5P48382 616 aaPredicted RBP13.42□□□□□ -0.26
LINC01550-206ENST00000556462 C8orf34Q49A92 452 aa13.42□□□□□ -0.26
LINC01550-206ENST00000556462 LMBR1LQ6UX01 489 aa13.42□□□□□ -0.26
LINC01550-206ENST00000556462 CLEC4GQ6UXB4 293 aa13.42□□□□□ -0.26
LINC01550-206ENST00000556462 SYNE4Q8N205 404 aa13.42□□□□□ -0.26
LINC01550-206ENST00000556462 OTUD7AQ8TE49 926 aaPredicted RBP13.42□□□□□ -0.26
LINC01550-206ENST00000556462 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
LINC01550-206ENST00000556462 FAM161AQ3B820 660 aa13.41□□□□□ -0.26
LINC01550-206ENST00000556462 PLA2G12BQ9BX93 195 aa13.41□□□□□ -0.26
LINC01550-206ENST00000556462 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
LINC01550-206ENST00000556462 TAF1LQ8IZX4 1826 aa13.41□□□□□ -0.26
LINC01550-206ENST00000556462 PLSCR1O15162 318 aa13.41□□□□□ -0.26
LINC01550-206ENST00000556462 HSP90AB4PQ58FF6 505 aa13.41□□□□□ -0.26
LINC01550-206ENST00000556462 SUSD4Q5VX71 490 aa13.41□□□□□ -0.26
LINC01550-206ENST00000556462 KLHDC4Q8TBB5 520 aa13.41□□□□□ -0.26
LINC01550-206ENST00000556462 RHPN1Q8TCX5 695 aa13.41□□□□□ -0.26
LINC01550-206ENST00000556462 BCL2L12Q9HB09 334 aa13.41□□□□□ -0.26
LINC01550-206ENST00000556462 CDHR2Q9BYE9 1310 aa13.4□□□□□ -0.26
LINC01550-206ENST00000556462 RGL2O15211 777 aa13.4□□□□□ -0.26
LINC01550-206ENST00000556462 PTPN12Q05209 780 aaKnown RBP13.4□□□□□ -0.26
LINC01550-206ENST00000556462 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
LINC01550-206ENST00000556462 ARHGEF1Q92888 912 aaKnown RBP13.4□□□□□ -0.26
LINC01550-206ENST00000556462 KIF1BPQ96EK5 621 aa13.4□□□□□ -0.26
LINC01550-206ENST00000556462 BCL11AQ9H165 835 aa13.4□□□□□ -0.26
LINC01550-206ENST00000556462 COPRSQ9NQ92 184 aa13.4□□□□□ -0.26
LINC01550-206ENST00000556462 NARFQ9UHQ1 456 aa13.4□□□□□ -0.26
LINC01550-206ENST00000556462 TRMT112Q9UI30 125 aaKnown RBP13.4□□□□□ -0.26
LINC01550-206ENST00000556462 ANKRD36CQ5JPF3 1778 aa13.4□□□□□ -0.27
LINC01550-206ENST00000556462 IL1RAPL2Q9NP60 686 aa13.4□□□□□ -0.27
LINC01550-206ENST00000556462 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.27
LINC01550-206ENST00000556462 C4BP0C0L5 1744 aa13.39□□□□□ -0.27
LINC01550-206ENST00000556462 SALL3Q9BXA9 1300 aa13.39□□□□□ -0.27
LINC01550-206ENST00000556462 APBA3O96018 575 aa13.39□□□□□ -0.27
LINC01550-206ENST00000556462 CSF1RP07333 972 aa13.39□□□□□ -0.27
LINC01550-206ENST00000556462 PARP10Q53GL7 1025 aa13.39□□□□□ -0.27
LINC01550-206ENST00000556462 NIP7Q9Y221 180 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC01550-206ENST00000556462 RBM19Q9Y4C8 960 aaKnown RBP13.39□□□□□ -0.27
LINC01550-206ENST00000556462 SASH1O94885 1247 aa13.38□□□□□ -0.27
LINC01550-206ENST00000556462 USPL1Q5W0Q7 1092 aa13.38□□□□□ -0.27
LINC01550-206ENST00000556462 AK7Q96M32 723 aa13.38□□□□□ -0.27
LINC01550-206ENST00000556462 SRP68Q9UHB9 627 aaKnown RBP13.38□□□□□ -0.27
LINC01550-206ENST00000556462 IRS4O14654 1257 aaPredicted RBP13.38□□□□□ -0.27
LINC01550-206ENST00000556462 G3BP1Q13283 466 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC01550-206ENST00000556462 BMP2KLQ5H9B9 411 aa13.38□□□□□ -0.27
LINC01550-206ENST00000556462 TRAPPC3LQ5T215 181 aa13.38□□□□□ -0.27
LINC01550-206ENST00000556462 SIL1Q9H173 461 aa13.38□□□□□ -0.27
LINC01550-206ENST00000556462 OSBPL3Q9H4L5 887 aa13.38□□□□□ -0.27
LINC01550-206ENST00000556462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.38□□□□□ -0.27
LINC01550-206ENST00000556462 NTSR2O95665 410 aa13.37□□□□□ -0.27
LINC01550-206ENST00000556462 PDE1AP54750 535 aa13.37□□□□□ -0.27
LINC01550-206ENST00000556462 OS9Q13438 667 aaPredicted RBP13.37□□□□□ -0.27
LINC01550-206ENST00000556462 ERC1Q8IUD2 1116 aa13.37□□□□□ -0.27
LINC01550-206ENST00000556462 UTP14AQ9BVJ6 771 aaKnown RBP13.37□□□□□ -0.27
LINC01550-206ENST00000556462 BCORQ6W2J9 1755 aa13.36□□□□□ -0.27
LINC01550-206ENST00000556462 ZPR1O75312 459 aa13.36□□□□□ -0.27
LINC01550-206ENST00000556462 GSPT1P15170 499 aaKnown RBP13.36□□□□□ -0.27
LINC01550-206ENST00000556462 TBC1D9BQ66K14 1250 aa13.36□□□□□ -0.27
LINC01550-206ENST00000556462 TTLL11Q8NHH1 800 aa13.36□□□□□ -0.27
LINC01550-206ENST00000556462 CHMP3Q9Y3E7 222 aa13.36□□□□□ -0.27
LINC01550-206ENST00000556462 SH3TC1Q8TE82 1336 aa13.36□□□□□ -0.27
LINC01550-206ENST00000556462 FAM177BA6PVY3 158 aa13.36□□□□□ -0.27
LINC01550-206ENST00000556462 PDE8AO60658 829 aa13.36□□□□□ -0.27
LINC01550-206ENST00000556462 PHF14O94880 888 aa13.36□□□□□ -0.27
LINC01550-206ENST00000556462 ADRA2BP18089 450 aa13.36□□□□□ -0.27
LINC01550-206ENST00000556462 STAP2Q9UGK3 403 aa13.36□□□□□ -0.27
LINC01550-206ENST00000556462 USP42Q9H9J4 1324 aaKnown RBP13.36□□□□□ -0.27
LINC01550-206ENST00000556462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.35□□□□□ -0.27
LINC01550-206ENST00000556462 RFC4P35249 363 aa13.35□□□□□ -0.27
LINC01550-206ENST00000556462 CTSWP56202 376 aa13.35□□□□□ -0.27
LINC01550-206ENST00000556462 TTC22Q5TAA0 569 aa13.35□□□□□ -0.27
LINC01550-206ENST00000556462 MX1P20591 662 aa13.35□□□□□ -0.27
LINC01550-206ENST00000556462 NUTM1Q86Y26 1132 aa13.35□□□□□ -0.27
LINC01550-206ENST00000556462 ZNF594Q96JF6 807 aaPredicted RBP13.35□□□□□ -0.27
LINC01550-206ENST00000556462 HCLS1P14317 486 aaPredicted RBP13.34□□□□□ -0.27
LINC01550-206ENST00000556462 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
LINC01550-206ENST00000556462 SSFA2P28290 1259 aa13.34□□□□□ -0.27
LINC01550-206ENST00000556462 CCDC57Q2TAC2 916 aa13.34□□□□□ -0.27
LINC01550-206ENST00000556462 ATG9AQ7Z3C6 839 aa13.34□□□□□ -0.27
LINC01550-206ENST00000556462 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
LINC01550-206ENST00000556462 CCDC85AQ96PX6 553 aaPredicted RBP13.34□□□□□ -0.27
LINC01550-206ENST00000556462 SCN7AQ01118 1682 aa13.33□□□□□ -0.27
LINC01550-206ENST00000556462 TSHZ3Q63HK5 1081 aa13.33□□□□□ -0.27
LINC01550-206ENST00000556462 BICDL1Q6ZP65 573 aa13.33□□□□□ -0.27
LINC01550-206ENST00000556462 EAF2Q96CJ1 260 aaPredicted RBP13.33□□□□□ -0.27
LINC01550-206ENST00000556462 GREM2Q9H772 168 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms