RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ZCRB1Q8TBF4 217 aaKnown RBP17.63■□□□□ 0.41
NEK9-209ENST00000556170 SLC52A2Q9HAB3 445 aa17.63■□□□□ 0.41
NEK9-209ENST00000556170 USP25Q9UHP3 1055 aa17.63■□□□□ 0.41
NEK9-209ENST00000556170 BECN2A8MW95 431 aa17.63■□□□□ 0.41
NEK9-209ENST00000556170 SYT1P21579 422 aa17.63■□□□□ 0.41
NEK9-209ENST00000556170 GIMAP6Q6P9H5 292 aa17.62■□□□□ 0.41
NEK9-209ENST00000556170 RBSNQ9H1K0 784 aa17.62■□□□□ 0.41
NEK9-209ENST00000556170 DLC1Q96QB1 1528 aa17.62■□□□□ 0.41
NEK9-209ENST00000556170 ZSCAN22P10073 491 aaPredicted RBP17.62■□□□□ 0.41
NEK9-209ENST00000556170 CREB3L3Q68CJ9 461 aa17.62■□□□□ 0.41
NEK9-209ENST00000556170 SPATA32Q96LK8 384 aa17.62■□□□□ 0.41
NEK9-209ENST00000556170 DBNDD2Q9BQY9 259 aa17.62■□□□□ 0.41
NEK9-209ENST00000556170 TLR7Q9NYK1 1049 aaKnown RBP17.62■□□□□ 0.41
NEK9-209ENST00000556170 TTC41PQ6P2S7 1318 aa17.62■□□□□ 0.41
NEK9-209ENST00000556170 USP31Q70CQ4 1352 aa17.62■□□□□ 0.41
NEK9-209ENST00000556170 RRP9O43818 475 aaKnown RBP17.62■□□□□ 0.41
NEK9-209ENST00000556170 ANKRD1Q15327 319 aa17.62■□□□□ 0.41
NEK9-209ENST00000556170 CKAP2LQ8IYA6 745 aa17.62■□□□□ 0.41
NEK9-209ENST00000556170 GADD45BO75293 160 aaPredicted RBP17.61■□□□□ 0.41
NEK9-209ENST00000556170 HCLS1P14317 486 aaPredicted RBP17.61■□□□□ 0.41
NEK9-209ENST00000556170 CHST3Q7LGC8 479 aa17.61■□□□□ 0.41
NEK9-209ENST00000556170 CDC42BPGQ6DT37 1551 aa17.61■□□□□ 0.41
NEK9-209ENST00000556170 GOLGA6L19H0YKK7 550 aa17.61■□□□□ 0.41
NEK9-209ENST00000556170 IDH1O75874 414 aaKnown RBP17.61■□□□□ 0.41
NEK9-209ENST00000556170 HSPA4P34932 840 aa17.61■□□□□ 0.41
NEK9-209ENST00000556170 CHAF1AQ13111 956 aaPredicted RBP17.61■□□□□ 0.41
NEK9-209ENST00000556170 GCKRQ14397 625 aa17.61■□□□□ 0.41
NEK9-209ENST00000556170 SASS6Q6UVJ0 657 aa17.61■□□□□ 0.41
NEK9-209ENST00000556170 ZSCAN30Q86W11 494 aa17.61■□□□□ 0.41
NEK9-209ENST00000556170 ZNF594Q96JF6 807 aaPredicted RBP17.61■□□□□ 0.41
NEK9-209ENST00000556170 CWC25Q9NXE8 425 aaPredicted RBP17.61■□□□□ 0.41
NEK9-209ENST00000556170 LRRFIP1Q32MZ4 808 aaKnown RBP17.61■□□□□ 0.41
NEK9-209ENST00000556170 NFXL1Q6ZNB6 911 aa17.61■□□□□ 0.41
NEK9-209ENST00000556170 BRF1Q92994 677 aa17.61■□□□□ 0.41
NEK9-209ENST00000556170 DCAF5Q96JK2 942 aa17.61■□□□□ 0.41
NEK9-209ENST00000556170 HSP90AB3PQ58FF7 597 aa17.6■□□□□ 0.41
NEK9-209ENST00000556170 RAD50Q92878 1312 aa17.6■□□□□ 0.41
NEK9-209ENST00000556170 AGLP35573 1532 aa17.6■□□□□ 0.41
NEK9-209ENST00000556170 TMEM63CQ9P1W3 806 aa17.6■□□□□ 0.41
NEK9-209ENST00000556170 DIP2BQ9P265 1576 aa17.6■□□□□ 0.41
NEK9-209ENST00000556170 NUTM2BA6NNL0 878 aaPredicted RBP17.6■□□□□ 0.41
NEK9-209ENST00000556170 NUTM2EB1AL46 878 aaPredicted RBP17.6■□□□□ 0.41
NEK9-209ENST00000556170 NUTM2AQ8IVF1 878 aaPredicted RBP17.6■□□□□ 0.41
NEK9-209ENST00000556170 SH2B1Q9NRF2 756 aaPredicted RBP17.59■□□□□ 0.41
NEK9-209ENST00000556170 STAP2Q9UGK3 403 aa17.59■□□□□ 0.41
NEK9-209ENST00000556170 ATP10DQ9P241 1426 aa17.59■□□□□ 0.41
NEK9-209ENST00000556170 ADCK5Q3MIX3 580 aa17.59■□□□□ 0.41
NEK9-209ENST00000556170 RRP12Q5JTH9 1297 aaKnown RBP17.59■□□□□ 0.41
NEK9-209ENST00000556170 METTL24Q5JXM2 366 aa17.59■□□□□ 0.41
NEK9-209ENST00000556170 CCDC39Q9UFE4 941 aa17.59■□□□□ 0.41
NEK9-209ENST00000556170 CCDC171Q6TFL3 1326 aa17.59■□□□□ 0.41
NEK9-209ENST00000556170 RICTORQ6R327 1708 aa17.59■□□□□ 0.41
NEK9-209ENST00000556170 METTL22Q9BUU2 404 aaPredicted RBP17.59■□□□□ 0.41
NEK9-209ENST00000556170 IFT172Q9UG01 1749 aa17.58■□□□□ 0.41
NEK9-209ENST00000556170 RBM10P98175 930 aaKnown RBP17.58■□□□□ 0.41
NEK9-209ENST00000556170 NEK1Q96PY6 1258 aa17.58■□□□□ 0.41
NEK9-209ENST00000556170 SDF4Q9BRK5 362 aa17.58■□□□□ 0.41
NEK9-209ENST00000556170 NEURL1BA8MQ27 555 aa17.58■□□□□ 0.4
NEK9-209ENST00000556170 LRSAM1Q6UWE0 723 aa17.58■□□□□ 0.4
NEK9-209ENST00000556170 TNMDQ9H2S6 317 aa17.58■□□□□ 0.4
NEK9-209ENST00000556170 PHKG2P15735 406 aa17.58■□□□□ 0.4
NEK9-209ENST00000556170 CCDC73Q6ZRK6 1079 aa17.58■□□□□ 0.4
NEK9-209ENST00000556170 ZNF830Q96NB3 372 aaPredicted RBP17.58■□□□□ 0.4
NEK9-209ENST00000556170 ADAMTS2O95450 1211 aa17.57■□□□□ 0.4
NEK9-209ENST00000556170 ATP2B1P20020 1258 aa17.57■□□□□ 0.4
NEK9-209ENST00000556170 INTS4Q96HW7 963 aaKnown RBP17.57■□□□□ 0.4
NEK9-209ENST00000556170 ADGRB2O60241 1585 aa17.57■□□□□ 0.4
NEK9-209ENST00000556170 GOLGA6L6A8MZA4 724 aa17.57■□□□□ 0.4
NEK9-209ENST00000556170 FSD2A1L4K1 749 aa17.57■□□□□ 0.4
NEK9-209ENST00000556170 KRT32Q14532 448 aa17.57■□□□□ 0.4
NEK9-209ENST00000556170 GPT2Q8TD30 523 aa17.57■□□□□ 0.4
NEK9-209ENST00000556170 SEC62Q99442 399 aaKnown RBP17.57■□□□□ 0.4
NEK9-209ENST00000556170 TRIM5Q9C035 493 aa17.57■□□□□ 0.4
NEK9-209ENST00000556170 IL25Q9H293 177 aa17.57■□□□□ 0.4
NEK9-209ENST00000556170 A0A0D9SFI3 127 aa17.56■□□□□ 0.4
NEK9-209ENST00000556170 ME1P48163 572 aa17.56■□□□□ 0.4
NEK9-209ENST00000556170 F13A1P00488 732 aa17.56■□□□□ 0.4
NEK9-209ENST00000556170 IFIT5Q13325 482 aaKnown RBP17.56■□□□□ 0.4
NEK9-209ENST00000556170 NSFL1CQ9UNZ2 370 aaKnown RBP17.56■□□□□ 0.4
NEK9-209ENST00000556170 SPATA31D1Q6ZQQ2 1576 aa17.56■□□□□ 0.4
NEK9-209ENST00000556170 TTLL7Q6ZT98 887 aa17.56■□□□□ 0.4
NEK9-209ENST00000556170 FAM89AQ96GI7 184 aa17.56■□□□□ 0.4
NEK9-209ENST00000556170 ERBB3P21860 1342 aa17.56■□□□□ 0.4
NEK9-209ENST00000556170 STARD3NLO95772 234 aa17.55■□□□□ 0.4
NEK9-209ENST00000556170 CCDC183Q5T5S1 534 aa17.55■□□□□ 0.4
NEK9-209ENST00000556170 PI4K2BQ8TCG2 481 aa17.55■□□□□ 0.4
NEK9-209ENST00000556170 NUP62CLQ9H1M0 184 aa17.55■□□□□ 0.4
NEK9-209ENST00000556170 BRD1O95696 1058 aa17.55■□□□□ 0.4
NEK9-209ENST00000556170 CCDC192P0DO97 292 aa17.55■□□□□ 0.4
NEK9-209ENST00000556170 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.55■□□□□ 0.4
NEK9-209ENST00000556170 LDHAL6AQ6ZMR3 332 aa17.55■□□□□ 0.4
NEK9-209ENST00000556170 RUFY3Q7L099 469 aa17.55■□□□□ 0.4
NEK9-209ENST00000556170 TRMT112Q9UI30 125 aaKnown RBP17.55■□□□□ 0.4
NEK9-209ENST00000556170 SYNE3Q6ZMZ3 975 aa17.55■□□□□ 0.4
NEK9-209ENST00000556170 KDRP35968 1356 aa17.55■□□□□ 0.4
NEK9-209ENST00000556170 TECPR2O15040 1411 aa17.54■□□□□ 0.4
NEK9-209ENST00000556170 USP32Q8NFA0 1604 aa17.54■□□□□ 0.4
NEK9-209ENST00000556170 TNNI3KQ59H18 835 aa17.54■□□□□ 0.4
NEK9-209ENST00000556170 CPLX2Q6PUV4 134 aaKnown RBP17.54■□□□□ 0.4
NEK9-209ENST00000556170 Q6ZUG5 572 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms