RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 H7C1W4 665 aa18.1■□□□□ 0.49
VPS33B-205ENST00000556096 CYP19A1P11511 503 aaPredicted RBP18.1■□□□□ 0.49
VPS33B-205ENST00000556096 CCDC191Q8NCU4 936 aa18.1■□□□□ 0.49
VPS33B-205ENST00000556096 RABL6Q3YEC7 729 aaPredicted RBP18.09■□□□□ 0.49
VPS33B-205ENST00000556096 SMARCC1Q92922 1105 aaPredicted RBP18.09■□□□□ 0.49
VPS33B-205ENST00000556096 CWC25Q9NXE8 425 aaPredicted RBP18.09■□□□□ 0.49
VPS33B-205ENST00000556096 RBM25P49756 843 aaKnown RBP18.09■□□□□ 0.49
VPS33B-205ENST00000556096 CCDC125Q86Z20 511 aa18.09■□□□□ 0.49
VPS33B-205ENST00000556096 PROM2Q8N271 834 aa18.09■□□□□ 0.49
VPS33B-205ENST00000556096 IL1RAPL2Q9NP60 686 aa18.09■□□□□ 0.49
VPS33B-205ENST00000556096 TRIM28Q13263 835 aaKnown RBP18.08■□□□□ 0.48
VPS33B-205ENST00000556096 OS9Q13438 667 aaPredicted RBP18.08■□□□□ 0.48
VPS33B-205ENST00000556096 EPHA10Q5JZY3 1008 aa18.08■□□□□ 0.48
VPS33B-205ENST00000556096 UBE3BQ7Z3V4 1068 aa18.08■□□□□ 0.48
VPS33B-205ENST00000556096 CAMKK2Q96RR4 588 aa18.08■□□□□ 0.48
VPS33B-205ENST00000556096 ISCA1Q9BUE6 129 aa18.08■□□□□ 0.48
VPS33B-205ENST00000556096 ZBTB3Q9H5J0 574 aa18.08■□□□□ 0.48
VPS33B-205ENST00000556096 LOC102724428A0A0B4J2F2 783 aa18.07■□□□□ 0.48
VPS33B-205ENST00000556096 SIK1P57059 783 aa18.07■□□□□ 0.48
VPS33B-205ENST00000556096 TCIRG1Q13488 830 aa18.07■□□□□ 0.48
VPS33B-205ENST00000556096 CASC1Q6TDU7 716 aa18.07■□□□□ 0.48
VPS33B-205ENST00000556096 KIF6Q6ZMV9 814 aa18.07■□□□□ 0.48
VPS33B-205ENST00000556096 RREB1Q92766 1687 aa18.07■□□□□ 0.48
VPS33B-205ENST00000556096 USP42Q9H9J4 1324 aaKnown RBP18.07■□□□□ 0.48
VPS33B-205ENST00000556096 G3BP1Q13283 466 aaKnown RBP eCLIP18.06■□□□□ 0.48
VPS33B-205ENST00000556096 TXNRD1Q16881 649 aa18.06■□□□□ 0.48
VPS33B-205ENST00000556096 DAXXQ9UER7 740 aaPredicted RBP18.06■□□□□ 0.48
VPS33B-205ENST00000556096 PA2G4Q9UQ80 394 aaKnown RBP18.06■□□□□ 0.48
VPS33B-205ENST00000556096 PLSCR1O15162 318 aa18.06■□□□□ 0.48
VPS33B-205ENST00000556096 ATP6V1AP38606 617 aa18.06■□□□□ 0.48
VPS33B-205ENST00000556096 CLASRPQ8N2M8 674 aaKnown RBP18.06■□□□□ 0.48
VPS33B-205ENST00000556096 COPRSQ9NQ92 184 aa18.06■□□□□ 0.48
VPS33B-205ENST00000556096 LRRC4BQ9NT99 713 aa18.06■□□□□ 0.48
VPS33B-205ENST00000556096 CCNL1Q9UK58 526 aaPredicted RBP18.06■□□□□ 0.48
VPS33B-205ENST00000556096 MYH14Q7Z406 1995 aaKnown RBP18.06■□□□□ 0.48
VPS33B-205ENST00000556096 TAF1LQ8IZX4 1826 aa18.05■□□□□ 0.48
VPS33B-205ENST00000556096 TUBGCP6Q96RT7 1819 aa18.05■□□□□ 0.48
VPS33B-205ENST00000556096 MAP3K15Q6ZN16 1313 aa18.05■□□□□ 0.48
VPS33B-205ENST00000556096 ITPK1Q13572 414 aa18.05■□□□□ 0.48
VPS33B-205ENST00000556096 NUTM1Q86Y26 1132 aa18.05■□□□□ 0.48
VPS33B-205ENST00000556096 IL6STP40189 918 aaPredicted RBP18.04■□□□□ 0.48
VPS33B-205ENST00000556096 RFX5P48382 616 aaPredicted RBP18.04■□□□□ 0.48
VPS33B-205ENST00000556096 BECN1Q14457 450 aa18.04■□□□□ 0.48
VPS33B-205ENST00000556096 TTC41PQ6P2S7 1318 aa18.04■□□□□ 0.48
VPS33B-205ENST00000556096 FOXO4P98177 505 aa18.03■□□□□ 0.48
VPS33B-205ENST00000556096 GIGYF2Q6Y7W6 1299 aaKnown RBP18.03■□□□□ 0.48
VPS33B-205ENST00000556096 JARID2Q92833 1246 aaPredicted RBP18.03■□□□□ 0.48
VPS33B-205ENST00000556096 SASH1O94885 1247 aa18.03■□□□□ 0.48
VPS33B-205ENST00000556096 TSHZ3Q63HK5 1081 aa18.03■□□□□ 0.48
VPS33B-205ENST00000556096 PI4K2BQ8TCG2 481 aa18.03■□□□□ 0.48
VPS33B-205ENST00000556096 ZBTB1Q9Y2K1 713 aa18.03■□□□□ 0.48
VPS33B-205ENST00000556096 HSP90AB3PQ58FF7 597 aa18.02■□□□□ 0.48
VPS33B-205ENST00000556096 ZNF330Q9Y3S2 320 aaPredicted RBP18.02■□□□□ 0.48
VPS33B-205ENST00000556096 ERVV-1B6SEH8 477 aa18.01■□□□□ 0.47
VPS33B-205ENST00000556096 PTPN12Q05209 780 aaKnown RBP18.01■□□□□ 0.47
VPS33B-205ENST00000556096 RGPD3A6NKT7 1758 aaPredicted RBP18.01■□□□□ 0.47
VPS33B-205ENST00000556096 RGPD4Q7Z3J3 1758 aa18.01■□□□□ 0.47
VPS33B-205ENST00000556096 LMBR1LQ6UX01 489 aa18.01■□□□□ 0.47
VPS33B-205ENST00000556096 ERC2O15083 957 aa18■□□□□ 0.47
VPS33B-205ENST00000556096 GLRX3O76003 335 aaKnown RBP18■□□□□ 0.47
VPS33B-205ENST00000556096 PCCAP05165 728 aaPredicted RBP18■□□□□ 0.47
VPS33B-205ENST00000556096 IFIT2P09913 472 aaKnown RBP18■□□□□ 0.47
VPS33B-205ENST00000556096 LINC00116Q8NCU8 138 aa18■□□□□ 0.47
VPS33B-205ENST00000556096 GPATCH3Q96I76 525 aa18■□□□□ 0.47
VPS33B-205ENST00000556096 TRIM6-TRIM34B2RNG4 842 aa17.99■□□□□ 0.47
VPS33B-205ENST00000556096 CRKLP46109 303 aaKnown RBP17.99■□□□□ 0.47
VPS33B-205ENST00000556096 SLC4A3P48751 1232 aa17.99■□□□□ 0.47
VPS33B-205ENST00000556096 EIF5P55010 431 aaKnown RBP17.99■□□□□ 0.47
VPS33B-205ENST00000556096 INTS5Q6P9B9 1019 aaKnown RBP17.99■□□□□ 0.47
VPS33B-205ENST00000556096 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
VPS33B-205ENST00000556096 ANP32EQ9BTT0 268 aa17.99■□□□□ 0.47
VPS33B-205ENST00000556096 USP26Q9BXU7 913 aa17.99■□□□□ 0.47
VPS33B-205ENST00000556096 ECHDC1Q9NTX5 307 aa17.99■□□□□ 0.47
VPS33B-205ENST00000556096 CCDC87Q9NVE4 849 aa17.99■□□□□ 0.47
VPS33B-205ENST00000556096 REC8O95072 547 aa17.98■□□□□ 0.47
VPS33B-205ENST00000556096 ZBTB38Q8NAP3 1195 aaPredicted RBP17.98■□□□□ 0.47
VPS33B-205ENST00000556096 KLHDC4Q8TBB5 520 aa17.98■□□□□ 0.47
VPS33B-205ENST00000556096 RILPL2Q969X0 211 aa17.98■□□□□ 0.47
VPS33B-205ENST00000556096 PLA2G12BQ9BX93 195 aa17.98■□□□□ 0.47
VPS33B-205ENST00000556096 SIL1Q9H173 461 aa17.98■□□□□ 0.47
VPS33B-205ENST00000556096 ANO8Q9HCE9 1232 aaPredicted RBP17.98■□□□□ 0.47
VPS33B-205ENST00000556096 CHMLP26374 656 aa17.98■□□□□ 0.47
VPS33B-205ENST00000556096 HLFQ16534 295 aa17.98■□□□□ 0.47
VPS33B-205ENST00000556096 SLC27A3Q5K4L6 730 aa17.98■□□□□ 0.47
VPS33B-205ENST00000556096 AACSQ86V21 672 aa17.98■□□□□ 0.47
VPS33B-205ENST00000556096 EAF2Q96CJ1 260 aaPredicted RBP17.98■□□□□ 0.47
VPS33B-205ENST00000556096 C4BP0C0L5 1744 aa17.97■□□□□ 0.47
VPS33B-205ENST00000556096 ZNF827Q17R98 1081 aa17.97■□□□□ 0.47
VPS33B-205ENST00000556096 DZIP3Q86Y13 1208 aaKnown RBP17.97■□□□□ 0.47
VPS33B-205ENST00000556096 ARXQ96QS3 562 aa17.97■□□□□ 0.47
VPS33B-205ENST00000556096 NLRP10Q86W26 655 aa17.96■□□□□ 0.47
VPS33B-205ENST00000556096 CNTROBQ8N137 903 aa17.96■□□□□ 0.47
VPS33B-205ENST00000556096 KIF2CQ99661 725 aa17.96■□□□□ 0.47
VPS33B-205ENST00000556096 TBC1D2Q9BYX2 928 aa17.96■□□□□ 0.47
VPS33B-205ENST00000556096 CDHR2Q9BYE9 1310 aa17.96■□□□□ 0.47
VPS33B-205ENST00000556096 ANKRD36CQ5JPF3 1778 aa17.96■□□□□ 0.46
VPS33B-205ENST00000556096 NUP98P52948 1817 aa17.95■□□□□ 0.46
VPS33B-205ENST00000556096 ESYT1Q9BSJ8 1104 aa17.95■□□□□ 0.46
VPS33B-205ENST00000556096 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.95■□□□□ 0.46
VPS33B-205ENST00000556096 RTL5Q5HYW3 569 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms