RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 DLG5Q8TDM6 1919 aa8.92□□□□□ -0.98
PSEN1-216ENST00000556066 HEG1Q9ULI3 1381 aa8.92□□□□□ -0.98
PSEN1-216ENST00000556066 BTBD11A6QL63 1104 aa8.92□□□□□ -0.98
PSEN1-216ENST00000556066 POLRMTO00411 1230 aaKnown RBP8.92□□□□□ -0.98
PSEN1-216ENST00000556066 KCNA3P22001 575 aa8.92□□□□□ -0.98
PSEN1-216ENST00000556066 TM4SF1P30408 202 aa8.92□□□□□ -0.98
PSEN1-216ENST00000556066 NFIXQ14938 502 aa8.92□□□□□ -0.98
PSEN1-216ENST00000556066 DALRD3Q5D0E6 543 aaKnown RBP8.92□□□□□ -0.98
PSEN1-216ENST00000556066 BICDL1Q6ZP65 573 aa8.92□□□□□ -0.98
PSEN1-216ENST00000556066 NPM2Q86SE8 214 aaKnown RBP8.92□□□□□ -0.98
PSEN1-216ENST00000556066 RTF1Q92541 710 aaKnown RBP8.92□□□□□ -0.98
PSEN1-216ENST00000556066 PCNTO95613 3336 aa8.91□□□□□ -0.98
PSEN1-216ENST00000556066 KCNQ3O43525 872 aa8.91□□□□□ -0.98
PSEN1-216ENST00000556066 MCM10Q7L590 875 aa8.91□□□□□ -0.98
PSEN1-216ENST00000556066 FBXO22Q8NEZ5 403 aa8.91□□□□□ -0.98
PSEN1-216ENST00000556066 FMNL2Q96PY5 1086 aa8.91□□□□□ -0.98
PSEN1-216ENST00000556066 TEX13AQ9BXU3 409 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-216ENST00000556066 BCL2L12Q9HB09 334 aa8.91□□□□□ -0.98
PSEN1-216ENST00000556066 SBF1O95248 1867 aa8.91□□□□□ -0.98
PSEN1-216ENST00000556066 CCDC88AQ3V6T2 1871 aa8.91□□□□□ -0.98
PSEN1-216ENST00000556066 CEMIPQ8WUJ3 1361 aa8.9□□□□□ -0.98
PSEN1-216ENST00000556066 A0A087WZG4 1122 aa8.9□□□□□ -0.98
PSEN1-216ENST00000556066 TOMM70O94826 608 aa8.9□□□□□ -0.98
PSEN1-216ENST00000556066 A1BGP04217 495 aa8.9□□□□□ -0.98
PSEN1-216ENST00000556066 SERPINB2P05120 415 aa8.9□□□□□ -0.98
PSEN1-216ENST00000556066 NEFMP07197 916 aa8.9□□□□□ -0.98
PSEN1-216ENST00000556066 EIF5P55010 431 aaKnown RBP8.9□□□□□ -0.98
PSEN1-216ENST00000556066 HTRA3P83110 453 aa8.9□□□□□ -0.98
PSEN1-216ENST00000556066 DCTN1Q14203 1278 aa8.9□□□□□ -0.98
PSEN1-216ENST00000556066 VARS2Q5ST30 1063 aaKnown RBP8.9□□□□□ -0.98
PSEN1-216ENST00000556066 COL13A1Q5TAT6 717 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-216ENST00000556066 ZSWIM6Q9HCJ5 1215 aa8.9□□□□□ -0.98
PSEN1-216ENST00000556066 NMRK2Q9NPI5 230 aa8.9□□□□□ -0.98
PSEN1-216ENST00000556066 TBC1D2BQ9UPU7 963 aa8.9□□□□□ -0.98
PSEN1-216ENST00000556066 NRXN2Q9P2S2 1712 aa8.9□□□□□ -0.98
PSEN1-216ENST00000556066 CACNA1SQ13698 1873 aa8.89□□□□□ -0.99
PSEN1-216ENST00000556066 DLEC1Q9Y238 1755 aa8.89□□□□□ -0.99
PSEN1-216ENST00000556066 SCN7AQ01118 1682 aa8.89□□□□□ -0.99
PSEN1-216ENST00000556066 NPHP1O15259 732 aa8.89□□□□□ -0.99
PSEN1-216ENST00000556066 PIP4K2AP48426 406 aaPredicted RBP8.89□□□□□ -0.99
PSEN1-216ENST00000556066 C9orf131Q5VYM1 1079 aa8.89□□□□□ -0.99
PSEN1-216ENST00000556066 TBC1D9BQ66K14 1250 aa8.89□□□□□ -0.99
PSEN1-216ENST00000556066 ANKRD31Q8N7Z5 1873 aa8.88□□□□□ -0.99
PSEN1-216ENST00000556066 IL6STP40189 918 aaPredicted RBP8.88□□□□□ -0.99
PSEN1-216ENST00000556066 C2CD5Q86YS7 1000 aa8.88□□□□□ -0.99
PSEN1-216ENST00000556066 CCDC24Q8N4L8 307 aa8.88□□□□□ -0.99
PSEN1-216ENST00000556066 JMYQ8N9B5 988 aa8.88□□□□□ -0.99
PSEN1-216ENST00000556066 RNF181Q9P0P0 153 aa8.88□□□□□ -0.99
PSEN1-216ENST00000556066 USP16Q9Y5T5 823 aa8.88□□□□□ -0.99
PSEN1-216ENST00000556066 CARMIL3Q8ND23 1372 aa8.87□□□□□ -0.99
PSEN1-216ENST00000556066 BCORQ6W2J9 1755 aa8.87□□□□□ -0.99
PSEN1-216ENST00000556066 PRAMEF22A3QJZ6 481 aa8.87□□□□□ -0.99
PSEN1-216ENST00000556066 H0YIN7 160 aa8.87□□□□□ -0.99
PSEN1-216ENST00000556066 SNRPA1P09661 255 aaKnown RBP8.87□□□□□ -0.99
PSEN1-216ENST00000556066 DZIP3Q86Y13 1208 aaKnown RBP8.87□□□□□ -0.99
PSEN1-216ENST00000556066 MIS18AQ9NYP9 233 aa8.87□□□□□ -0.99
PSEN1-216ENST00000556066 HTATSF1O43719 755 aaKnown RBP8.86□□□□□ -0.99
PSEN1-216ENST00000556066 RASSF7Q02833 373 aa8.86□□□□□ -0.99
PSEN1-216ENST00000556066 TAF7Q15545 349 aaPredicted RBP8.86□□□□□ -0.99
PSEN1-216ENST00000556066 TTLL6Q8N841 843 aa8.86□□□□□ -0.99
PSEN1-216ENST00000556066 RBM46Q8TBY0 533 aaKnown RBP8.86□□□□□ -0.99
PSEN1-216ENST00000556066 ZNF622Q969S3 477 aaKnown RBP eCLIP8.86□□□□□ -0.99
PSEN1-216ENST00000556066 KLRG1Q96E93 195 aa8.86□□□□□ -0.99
PSEN1-216ENST00000556066 SETDB2Q96T68 719 aa8.86□□□□□ -0.99
PSEN1-216ENST00000556066 COL11A2P13942 1736 aaPredicted RBP8.85□□□□□ -0.99
PSEN1-216ENST00000556066 MAPK8IP3Q9UPT6 1336 aa8.85□□□□□ -0.99
PSEN1-216ENST00000556066 PPP1R37O75864 691 aa8.85□□□□□ -0.99
PSEN1-216ENST00000556066 CAMTA2O94983 1202 aa8.85□□□□□ -0.99
PSEN1-216ENST00000556066 PRR5LQ6MZQ0 368 aa8.85□□□□□ -0.99
PSEN1-216ENST00000556066 C16orf71Q8IYS4 520 aaPredicted RBP8.85□□□□□ -0.99
PSEN1-216ENST00000556066 ZNF687Q8N1G0 1237 aa8.85□□□□□ -0.99
PSEN1-216ENST00000556066 CNBD1Q8NA66 436 aa8.85□□□□□ -0.99
PSEN1-216ENST00000556066 GTF3C3Q9Y5Q9 886 aa8.85□□□□□ -0.99
PSEN1-216ENST00000556066 LAMB4A4D0S4 1761 aa8.85□□□□□ -0.99
PSEN1-216ENST00000556066 KDM2BQ8NHM5 1336 aa8.84□□□□□ -0.99
PSEN1-216ENST00000556066 KDM3BQ7LBC6 1761 aa8.84□□□□□ -0.99
PSEN1-216ENST00000556066 PDE6BP35913 854 aa8.84□□□□□ -0.99
PSEN1-216ENST00000556066 ST5P78524 1137 aa8.84□□□□□ -0.99
PSEN1-216ENST00000556066 TIAM2Q8IVF5 1701 aa8.84□□□□□ -0.99
PSEN1-216ENST00000556066 NGEFQ8N5V2 710 aa8.84□□□□□ -0.99
PSEN1-216ENST00000556066 MS4A4AQ96JQ5 239 aa8.84□□□□□ -0.99
PSEN1-216ENST00000556066 THUMPD2Q9BTF0 503 aaKnown RBP8.84□□□□□ -0.99
PSEN1-216ENST00000556066 BRIP1Q9BX63 1249 aa8.84□□□□□ -0.99
PSEN1-216ENST00000556066 PNNQ9H307 717 aaKnown RBP8.84□□□□□ -0.99
PSEN1-216ENST00000556066 ZNF652Q9Y2D9 606 aa8.84□□□□□ -0.99
PSEN1-216ENST00000556066 SLX4Q8IY92 1834 aa8.83□□□□□ -1
PSEN1-216ENST00000556066 FAM177BA6PVY3 158 aa8.83□□□□□ -1
PSEN1-216ENST00000556066 NBPF26B4DH59 902 aa8.83□□□□□ -1
PSEN1-216ENST00000556066 C21orf2O43822 256 aa8.83□□□□□ -1
PSEN1-216ENST00000556066 LMNB1P20700 586 aa8.83□□□□□ -1
PSEN1-216ENST00000556066 PRELPP51888 382 aa8.83□□□□□ -1
PSEN1-216ENST00000556066 FSTL1Q12841 308 aa8.83□□□□□ -1
PSEN1-216ENST00000556066 DDX10Q13206 875 aaKnown RBP8.83□□□□□ -1
PSEN1-216ENST00000556066 NFE2L2Q16236 605 aa8.83□□□□□ -1
PSEN1-216ENST00000556066 NBPF10Q6P3W6 841 aaKnown RBP8.83□□□□□ -1
PSEN1-216ENST00000556066 NBPF5PQ86XG9 351 aaPredicted RBP8.83□□□□□ -1
PSEN1-216ENST00000556066 NBPF15Q8N660 670 aa8.83□□□□□ -1
PSEN1-216ENST00000556066 PLEKHF1Q96S99 279 aa8.83□□□□□ -1
PSEN1-216ENST00000556066 RRAGCQ9HB90 399 aa8.83□□□□□ -1
PSEN1-216ENST00000556066 TNRC6CQ9HCJ0 1690 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms