RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 ATP5J2-PTCD1G3V325 749 aa15.07■□□□□ 0
APEX1-212ENST00000556054 PHF14O94880 888 aa15.07■□□□□ 0
APEX1-212ENST00000556054 GNAI2P04899 355 aa15.07■□□□□ 0
APEX1-212ENST00000556054 PCCAP05165 728 aaPredicted RBP15.07■□□□□ 0
APEX1-212ENST00000556054 UBTFL1P0CB47 393 aaPredicted RBP15.07■□□□□ 0
APEX1-212ENST00000556054 GYS1P13807 737 aa15.07■□□□□ 0
APEX1-212ENST00000556054 CASP7P55210 303 aa15.07■□□□□ 0
APEX1-212ENST00000556054 PPP1R42Q7Z4L9 355 aa15.07■□□□□ 0
APEX1-212ENST00000556054 NLGN1Q8N2Q7 840 aa15.07■□□□□ 0
APEX1-212ENST00000556054 ZBTB38Q8NAP3 1195 aaPredicted RBP15.07■□□□□ 0
APEX1-212ENST00000556054 PPP4R2Q9NY27 417 aa15.07■□□□□ 0
APEX1-212ENST00000556054 SRP68Q9UHB9 627 aaKnown RBP15.07■□□□□ 0
APEX1-212ENST00000556054 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
APEX1-212ENST00000556054 RPAP2Q8IXW5 612 aaPredicted RBP15.06■□□□□ 0
APEX1-212ENST00000556054 SLC16A10Q8TF71 515 aa15.06■□□□□ 0
APEX1-212ENST00000556054 NIP7Q9Y221 180 aaKnown RBP eCLIP15.06■□□□□ 0
APEX1-212ENST00000556054 CDHR2Q9BYE9 1310 aa15.06■□□□□ 0
APEX1-212ENST00000556054 NBPF7P0C2Y1 421 aaPredicted RBP15.05■□□□□ -0
APEX1-212ENST00000556054 TM4SF1P30408 202 aa15.05■□□□□ -0
APEX1-212ENST00000556054 SETDB2Q96T68 719 aa15.05■□□□□ -0
APEX1-212ENST00000556054 PLA2G12BQ9BX93 195 aa15.05■□□□□ -0
APEX1-212ENST00000556054 NYXQ9GZU5 481 aa15.05■□□□□ -0
APEX1-212ENST00000556054 GTF3C3Q9Y5Q9 886 aa15.05■□□□□ -0
APEX1-212ENST00000556054 UBN2Q6ZU65 1347 aa15.05■□□□□ -0
APEX1-212ENST00000556054 MTX1Q13505 466 aa15.04■□□□□ -0
APEX1-212ENST00000556054 TBC1D9BQ66K14 1250 aa15.04■□□□□ -0
APEX1-212ENST00000556054 SMIM5Q71RC9 77 aa15.04■□□□□ -0
APEX1-212ENST00000556054 UTP14AQ9BVJ6 771 aaKnown RBP15.04■□□□□ -0
APEX1-212ENST00000556054 CARMIL3Q8ND23 1372 aa15.03■□□□□ -0
APEX1-212ENST00000556054 SH3TC1Q8TE82 1336 aa15.03■□□□□ -0
APEX1-212ENST00000556054 GPTP24298 496 aa15.03■□□□□ -0
APEX1-212ENST00000556054 SLC10A5Q5PT55 438 aa15.03■□□□□ -0
APEX1-212ENST00000556054 SUSD4Q5VX71 490 aa15.03■□□□□ -0
APEX1-212ENST00000556054 LAMB2P55268 1798 aa15.03■□□□□ -0
APEX1-212ENST00000556054 MYH3P11055 1940 aa15.02■□□□□ -0
APEX1-212ENST00000556054 NTSR2O95665 410 aa15.02■□□□□ -0
APEX1-212ENST00000556054 HDAC1Q13547 482 aaPredicted RBP15.02■□□□□ -0
APEX1-212ENST00000556054 NFIXQ14938 502 aa15.02■□□□□ -0
APEX1-212ENST00000556054 RABL6Q3YEC7 729 aaPredicted RBP15.02■□□□□ -0
APEX1-212ENST00000556054 TPTE2Q6XPS3 522 aa15.02■□□□□ -0
APEX1-212ENST00000556054 UBE3BQ7Z3V4 1068 aa15.02■□□□□ -0
APEX1-212ENST00000556054 ANKRD44Q8N8A2 993 aa15.02■□□□□ -0
APEX1-212ENST00000556054 TRMT112Q9UI30 125 aaKnown RBP15.02■□□□□ -0
APEX1-212ENST00000556054 PCDHB15Q9Y5E8 787 aa15.02■□□□□ -0
APEX1-212ENST00000556054 RIC1Q4ADV7 1423 aa15.01□□□□□ -0.01
APEX1-212ENST00000556054 NRXN2Q9P2S2 1712 aa15.01□□□□□ -0.01
APEX1-212ENST00000556054 ATP8B2P98198 1209 aa15.01□□□□□ -0.01
APEX1-212ENST00000556054 KAZALD1Q96I82 304 aa15.01□□□□□ -0.01
APEX1-212ENST00000556054 LRRFIP2Q9Y608 721 aaKnown RBP15.01□□□□□ -0.01
APEX1-212ENST00000556054 CEP85Q6P2H3 762 aa15□□□□□ -0.01
APEX1-212ENST00000556054 FAM89AQ96GI7 184 aa15□□□□□ -0.01
APEX1-212ENST00000556054 SUCLG2Q96I99 432 aa15□□□□□ -0.01
APEX1-212ENST00000556054 RWDD1Q9H446 243 aaPredicted RBP15□□□□□ -0.01
APEX1-212ENST00000556054 CASZ1Q86V15 1759 aa15□□□□□ -0.01
APEX1-212ENST00000556054 MSH5O43196 834 aa14.99□□□□□ -0.01
APEX1-212ENST00000556054 PDE8AO60658 829 aa14.99□□□□□ -0.01
APEX1-212ENST00000556054 HMMRO75330 724 aa14.99□□□□□ -0.01
APEX1-212ENST00000556054 CSF1RP07333 972 aa14.99□□□□□ -0.01
APEX1-212ENST00000556054 FOXO4P98177 505 aa14.99□□□□□ -0.01
APEX1-212ENST00000556054 NBPF5PQ86XG9 351 aaPredicted RBP14.99□□□□□ -0.01
APEX1-212ENST00000556054 DDX60Q8IY21 1712 aaKnown RBP14.99□□□□□ -0.01
APEX1-212ENST00000556054 POLRMTO00411 1230 aaKnown RBP14.98□□□□□ -0.01
APEX1-212ENST00000556054 IRS4O14654 1257 aaPredicted RBP14.98□□□□□ -0.01
APEX1-212ENST00000556054 POLA2Q14181 598 aa14.98□□□□□ -0.01
APEX1-212ENST00000556054 SIRT2Q8IXJ6 389 aa14.98□□□□□ -0.01
APEX1-212ENST00000556054 SSH3Q8TE77 659 aa14.98□□□□□ -0.01
APEX1-212ENST00000556054 CCDC136Q96JN2 1154 aa14.98□□□□□ -0.01
APEX1-212ENST00000556054 SERPINB2P05120 415 aa14.97□□□□□ -0.01
APEX1-212ENST00000556054 BICDL1Q6ZP65 573 aa14.97□□□□□ -0.01
APEX1-212ENST00000556054 BICC1Q9H694 974 aaKnown RBP14.97□□□□□ -0.01
APEX1-212ENST00000556054 C1orf115Q9H7X2 142 aa14.97□□□□□ -0.01
APEX1-212ENST00000556054 RTL9Q8NET4 1388 aa14.97□□□□□ -0.01
APEX1-212ENST00000556054 DDR1Q08345 913 aa14.96□□□□□ -0.01
APEX1-212ENST00000556054 SF3B3Q15393 1217 aaKnown RBP14.96□□□□□ -0.01
APEX1-212ENST00000556054 EPHA10Q5JZY3 1008 aa14.96□□□□□ -0.01
APEX1-212ENST00000556054 GTF2E1P29083 439 aaPredicted RBP14.95□□□□□ -0.02
APEX1-212ENST00000556054 CTSWP56202 376 aa14.95□□□□□ -0.02
APEX1-212ENST00000556054 ERFEQ4G0M1 354 aa14.95□□□□□ -0.02
APEX1-212ENST00000556054 PRR5LQ6MZQ0 368 aa14.95□□□□□ -0.02
APEX1-212ENST00000556054 LMBR1LQ6UX01 489 aa14.95□□□□□ -0.02
APEX1-212ENST00000556054 CENPQQ7L2Z9 268 aaPredicted RBP14.95□□□□□ -0.02
APEX1-212ENST00000556054 CNBD1Q8NA66 436 aa14.95□□□□□ -0.02
APEX1-212ENST00000556054 TTLL11Q8NHH1 800 aa14.95□□□□□ -0.02
APEX1-212ENST00000556054 DCTPP1Q9H773 170 aa14.95□□□□□ -0.02
APEX1-212ENST00000556054 PARP3Q9Y6F1 533 aa14.95□□□□□ -0.02
APEX1-212ENST00000556054 KDM2BQ8NHM5 1336 aa14.94□□□□□ -0.02
APEX1-212ENST00000556054 PNMA6EA0A0J9YXQ4 647 aa14.94□□□□□ -0.02
APEX1-212ENST00000556054 KLRG2A4D1S0 409 aaPredicted RBP14.94□□□□□ -0.02
APEX1-212ENST00000556054 SRGAP3O43295 1099 aa14.94□□□□□ -0.02
APEX1-212ENST00000556054 MMP10P09238 476 aa14.94□□□□□ -0.02
APEX1-212ENST00000556054 ST5P78524 1137 aa14.94□□□□□ -0.02
APEX1-212ENST00000556054 SYNE4Q8N205 404 aa14.94□□□□□ -0.02
APEX1-212ENST00000556054 JARID2Q92833 1246 aaPredicted RBP14.94□□□□□ -0.02
APEX1-212ENST00000556054 GCC1Q96CN9 775 aa14.94□□□□□ -0.02
APEX1-212ENST00000556054 NLRP3Q96P20 1036 aa14.94□□□□□ -0.02
APEX1-212ENST00000556054 MTFR1LQ9H019 292 aa14.94□□□□□ -0.02
APEX1-212ENST00000556054 FBXO3Q9UK99 471 aa14.94□□□□□ -0.02
APEX1-212ENST00000556054 NOP58Q9Y2X3 529 aaKnown RBP14.94□□□□□ -0.02
APEX1-212ENST00000556054 IGHDP01880 384 aa14.93□□□□□ -0.02
APEX1-212ENST00000556054 CCDC152Q4G0S7 254 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms