RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 HEG1Q9ULI3 1381 aa18.82■□□□□ 0.6
ARHGEF40-203ENST00000554514 VPS37CA5D8V6 355 aaPredicted RBP18.82■□□□□ 0.6
ARHGEF40-203ENST00000554514 SLC52A2Q9HAB3 445 aa18.82■□□□□ 0.6
ARHGEF40-203ENST00000554514 USP16Q9Y5T5 823 aa18.82■□□□□ 0.6
ARHGEF40-203ENST00000554514 RGPD5Q99666 1765 aa18.82■□□□□ 0.6
ARHGEF40-203ENST00000554514 A0A0D9SFI3 127 aa18.82■□□□□ 0.6
ARHGEF40-203ENST00000554514 ZKSCAN1P17029 563 aaPredicted RBP18.82■□□□□ 0.6
ARHGEF40-203ENST00000554514 TATP17735 454 aaPredicted RBP18.82■□□□□ 0.6
ARHGEF40-203ENST00000554514 LARP1Q6PKG0 1096 aaKnown RBP18.82■□□□□ 0.6
ARHGEF40-203ENST00000554514 NEURL1BA8MQ27 555 aa18.81■□□□□ 0.6
ARHGEF40-203ENST00000554514 ATP5J2-PTCD1G3V325 749 aa18.81■□□□□ 0.6
ARHGEF40-203ENST00000554514 PTCD1O75127 700 aaKnown RBP18.81■□□□□ 0.6
ARHGEF40-203ENST00000554514 NPHP3Q7Z494 1330 aa18.81■□□□□ 0.6
ARHGEF40-203ENST00000554514 CREB3L3Q68CJ9 461 aa18.81■□□□□ 0.6
ARHGEF40-203ENST00000554514 TTC5Q8N0Z6 440 aa18.8■□□□□ 0.6
ARHGEF40-203ENST00000554514 F13A1P00488 732 aa18.8■□□□□ 0.6
ARHGEF40-203ENST00000554514 PHKG2P15735 406 aa18.8■□□□□ 0.6
ARHGEF40-203ENST00000554514 GCKRQ14397 625 aa18.8■□□□□ 0.6
ARHGEF40-203ENST00000554514 TAF6LQ9Y6J9 622 aa18.8■□□□□ 0.6
ARHGEF40-203ENST00000554514 SLIT3O75094 1523 aa18.79■□□□□ 0.6
ARHGEF40-203ENST00000554514 ME3Q16798 604 aa18.79■□□□□ 0.6
ARHGEF40-203ENST00000554514 NECTIN1Q15223 517 aa18.79■□□□□ 0.6
ARHGEF40-203ENST00000554514 UBE3BQ7Z3V4 1068 aa18.79■□□□□ 0.6
ARHGEF40-203ENST00000554514 CHGBP05060 677 aa18.78■□□□□ 0.6
ARHGEF40-203ENST00000554514 DNM1Q05193 864 aaKnown RBP18.78■□□□□ 0.6
ARHGEF40-203ENST00000554514 VPS53Q5VIR6 699 aa18.78■□□□□ 0.6
ARHGEF40-203ENST00000554514 PDLIM2Q96JY6 352 aa18.78■□□□□ 0.6
ARHGEF40-203ENST00000554514 ZSWIM6Q9HCJ5 1215 aa18.78■□□□□ 0.6
ARHGEF40-203ENST00000554514 CHMP3Q9Y3E7 222 aa18.78■□□□□ 0.6
ARHGEF40-203ENST00000554514 KDM6AO15550 1401 aaPredicted RBP18.78■□□□□ 0.6
ARHGEF40-203ENST00000554514 PTMAP06454 111 aaKnown RBP18.78■□□□□ 0.6
ARHGEF40-203ENST00000554514 ANKRD13DQ6ZTN6 518 aa18.78■□□□□ 0.6
ARHGEF40-203ENST00000554514 STK3Q13188 491 aa18.77■□□□□ 0.6
ARHGEF40-203ENST00000554514 ZNF589Q86UQ0 364 aaPredicted RBP18.77■□□□□ 0.6
ARHGEF40-203ENST00000554514 FERMT3Q86UX7 667 aa18.77■□□□□ 0.6
ARHGEF40-203ENST00000554514 TPCN1Q9ULQ1 816 aa18.77■□□□□ 0.6
ARHGEF40-203ENST00000554514 SLC27A2O14975 620 aa18.77■□□□□ 0.6
ARHGEF40-203ENST00000554514 METTL22Q9BUU2 404 aaPredicted RBP18.77■□□□□ 0.6
ARHGEF40-203ENST00000554514 C1orf167Q5SNV9 1468 aa18.77■□□□□ 0.6
ARHGEF40-203ENST00000554514 PHRF1Q9P1Y6 1649 aaKnown RBP18.77■□□□□ 0.59
ARHGEF40-203ENST00000554514 ST3GAL1Q11201 340 aa18.77■□□□□ 0.59
ARHGEF40-203ENST00000554514 DNAJC2Q99543 621 aaKnown RBP18.77■□□□□ 0.59
ARHGEF40-203ENST00000554514 PHF14O94880 888 aa18.76■□□□□ 0.59
ARHGEF40-203ENST00000554514 ATF3P18847 181 aa18.76■□□□□ 0.59
ARHGEF40-203ENST00000554514 TFCP2Q12800 502 aa18.76■□□□□ 0.59
ARHGEF40-203ENST00000554514 C19orf44Q9H6X5 657 aa18.76■□□□□ 0.59
ARHGEF40-203ENST00000554514 UTYO14607 1347 aa18.76■□□□□ 0.59
ARHGEF40-203ENST00000554514 IFNL2Q8IZJ0 200 aa18.76■□□□□ 0.59
ARHGEF40-203ENST00000554514 OVOS2A0A0G2JMS6 1433 aa18.76■□□□□ 0.59
ARHGEF40-203ENST00000554514 MAP4K1Q92918 833 aa18.75■□□□□ 0.59
ARHGEF40-203ENST00000554514 MTMR6Q9Y217 621 aa18.75■□□□□ 0.59
ARHGEF40-203ENST00000554514 MEGF6O75095 1541 aa18.75■□□□□ 0.59
ARHGEF40-203ENST00000554514 PLCB2Q00722 1185 aa18.75■□□□□ 0.59
ARHGEF40-203ENST00000554514 FAM173BQ6P4H8 233 aa18.75■□□□□ 0.59
ARHGEF40-203ENST00000554514 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.74■□□□□ 0.59
ARHGEF40-203ENST00000554514 HIP1O00291 1037 aa18.74■□□□□ 0.59
ARHGEF40-203ENST00000554514 CYP27B1O15528 508 aa18.74■□□□□ 0.59
ARHGEF40-203ENST00000554514 SNRPA1P09661 255 aaKnown RBP18.74■□□□□ 0.59
ARHGEF40-203ENST00000554514 CCDC183Q5T5S1 534 aa18.74■□□□□ 0.59
ARHGEF40-203ENST00000554514 BLOC1S2Q6QNY1 142 aa18.74■□□□□ 0.59
ARHGEF40-203ENST00000554514 CCDC129Q6ZRS4 1044 aa18.74■□□□□ 0.59
ARHGEF40-203ENST00000554514 ZSCAN31Q96LW9 406 aaPredicted RBP18.74■□□□□ 0.59
ARHGEF40-203ENST00000554514 NOL7Q9UMY1 257 aaKnown RBP18.74■□□□□ 0.59
ARHGEF40-203ENST00000554514 CRYBG1Q9Y4K1 1723 aa18.74■□□□□ 0.59
ARHGEF40-203ENST00000554514 A0A087WZG4 1122 aa18.73■□□□□ 0.59
ARHGEF40-203ENST00000554514 HCLS1P14317 486 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF40-203ENST00000554514 CABP4P57796 275 aa18.73■□□□□ 0.59
ARHGEF40-203ENST00000554514 SH2B1Q9NRF2 756 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF40-203ENST00000554514 DBNLQ9UJU6 430 aaKnown RBP18.73■□□□□ 0.59
ARHGEF40-203ENST00000554514 ATP6V1DQ9Y5K8 247 aa18.73■□□□□ 0.59
ARHGEF40-203ENST00000554514 UBE2HP62256 183 aa18.73■□□□□ 0.59
ARHGEF40-203ENST00000554514 LARP1BQ659C4 914 aaKnown RBP18.73■□□□□ 0.59
ARHGEF40-203ENST00000554514 TM6SF1Q9BZW5 370 aa18.73■□□□□ 0.59
ARHGEF40-203ENST00000554514 C5P01031 1676 aa18.73■□□□□ 0.59
ARHGEF40-203ENST00000554514 GIMAP6Q6P9H5 292 aa18.73■□□□□ 0.59
ARHGEF40-203ENST00000554514 USP25Q9UHP3 1055 aa18.73■□□□□ 0.59
ARHGEF40-203ENST00000554514 ZNF142P52746 1687 aaPredicted RBP18.72■□□□□ 0.59
ARHGEF40-203ENST00000554514 SEC62Q99442 399 aaKnown RBP18.72■□□□□ 0.59
ARHGEF40-203ENST00000554514 PSMA5P28066 241 aa18.72■□□□□ 0.59
ARHGEF40-203ENST00000554514 RNF20Q5VTR2 975 aa18.72■□□□□ 0.59
ARHGEF40-203ENST00000554514 FMNL2Q96PY5 1086 aa18.72■□□□□ 0.59
ARHGEF40-203ENST00000554514 PTPN12Q05209 780 aaKnown RBP18.71■□□□□ 0.59
ARHGEF40-203ENST00000554514 TNNI3KQ59H18 835 aa18.71■□□□□ 0.59
ARHGEF40-203ENST00000554514 DDX46Q7L014 1031 aaKnown RBP18.71■□□□□ 0.59
ARHGEF40-203ENST00000554514 CDC37L1Q7L3B6 337 aa18.71■□□□□ 0.59
ARHGEF40-203ENST00000554514 DBNDD2Q9BQY9 259 aa18.71■□□□□ 0.59
ARHGEF40-203ENST00000554514 R3HCC1Q9Y3T6 440 aaKnown RBP18.71■□□□□ 0.59
ARHGEF40-203ENST00000554514 FPGT-TNNI3KV9GXZ4 949 aa18.71■□□□□ 0.59
ARHGEF40-203ENST00000554514 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
ARHGEF40-203ENST00000554514 SIPA1L3O60292 1781 aaPredicted RBP18.71■□□□□ 0.59
ARHGEF40-203ENST00000554514 TMEM87AQ8NBN3 555 aa18.71■□□□□ 0.59
ARHGEF40-203ENST00000554514 CCDC39Q9UFE4 941 aa18.71■□□□□ 0.59
ARHGEF40-203ENST00000554514 KCNB2Q92953 911 aa18.7■□□□□ 0.58
ARHGEF40-203ENST00000554514 ZKSCAN5Q9Y2L8 839 aa18.7■□□□□ 0.58
ARHGEF40-203ENST00000554514 HS1BP3Q53T59 392 aa18.7■□□□□ 0.58
ARHGEF40-203ENST00000554514 SLFNL1Q499Z3 407 aa18.7■□□□□ 0.58
ARHGEF40-203ENST00000554514 DCAF5Q96JK2 942 aa18.7■□□□□ 0.58
ARHGEF40-203ENST00000554514 ZNF830Q96NB3 372 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF40-203ENST00000554514 NEUROD6Q96NK8 337 aa18.7■□□□□ 0.58
ARHGEF40-203ENST00000554514 LMBR1LQ6UX01 489 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms