RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 TEX13AQ9BXU3 409 aaPredicted RBP22.95■■□□□ 1.26
NEK9-204ENST00000554258 FAM155AB1AL88 458 aaPredicted RBP22.94■■□□□ 1.26
NEK9-204ENST00000554258 TPTE2Q6XPS3 522 aa22.94■■□□□ 1.26
NEK9-204ENST00000554258 CDC37L1Q7L3B6 337 aa22.94■■□□□ 1.26
NEK9-204ENST00000554258 NIM1KQ8IY84 436 aa22.94■■□□□ 1.26
NEK9-204ENST00000554258 PGAP2Q9UHJ9 254 aa22.94■■□□□ 1.26
NEK9-204ENST00000554258 CC2D2BQ6DHV5 1058 aa22.93■■□□□ 1.26
NEK9-204ENST00000554258 RGMBQ6NW40 437 aa22.93■■□□□ 1.26
NEK9-204ENST00000554258 A1BGP04217 495 aa22.92■■□□□ 1.26
NEK9-204ENST00000554258 PKN2Q16513 984 aaKnown RBP22.92■■□□□ 1.26
NEK9-204ENST00000554258 CCDC102AQ96A19 550 aa22.92■■□□□ 1.26
NEK9-204ENST00000554258 HEG1Q9ULI3 1381 aa22.91■■□□□ 1.26
NEK9-204ENST00000554258 ZC3H15Q8WU90 426 aaKnown RBP22.91■■□□□ 1.26
NEK9-204ENST00000554258 ZNF496Q96IT1 587 aaPredicted RBP22.91■■□□□ 1.26
NEK9-204ENST00000554258 ZNF652Q9Y2D9 606 aa22.91■■□□□ 1.26
NEK9-204ENST00000554258 CUL9Q8IWT3 2517 aa22.91■■□□□ 1.26
NEK9-204ENST00000554258 CLEC4GQ6UXB4 293 aa22.9■■□□□ 1.26
NEK9-204ENST00000554258 FAM177BA6PVY3 158 aa22.89■■□□□ 1.25
NEK9-204ENST00000554258 GMPSP49915 693 aaPredicted RBP22.89■■□□□ 1.25
NEK9-204ENST00000554258 ZNF157P51786 506 aaPredicted RBP22.89■■□□□ 1.25
NEK9-204ENST00000554258 DLL1O00548 723 aa22.88■■□□□ 1.25
NEK9-204ENST00000554258 GRIPAP1Q4V328 841 aa22.88■■□□□ 1.25
NEK9-204ENST00000554258 HDAC9Q9UKV0 1011 aa22.88■■□□□ 1.25
NEK9-204ENST00000554258 NPC1L1Q9UHC9 1359 aa22.88■■□□□ 1.25
NEK9-204ENST00000554258 A0A0C4DFX4 3053 aa22.87■■□□□ 1.25
NEK9-204ENST00000554258 USP48Q86UV5 1035 aa22.87■■□□□ 1.25
NEK9-204ENST00000554258 NIP7Q9Y221 180 aaKnown RBP eCLIP22.87■■□□□ 1.25
NEK9-204ENST00000554258 SZT2Q5T011 3432 aa22.87■■□□□ 1.25
NEK9-204ENST00000554258 PPIP5K2O43314 1243 aa22.86■■□□□ 1.25
NEK9-204ENST00000554258 GTF2E1P29083 439 aaPredicted RBP22.86■■□□□ 1.25
NEK9-204ENST00000554258 POLR2AP24928 1970 aaKnown RBP22.86■■□□□ 1.25
NEK9-204ENST00000554258 TRIOBPQ9H2D6 2365 aa22.86■■□□□ 1.25
NEK9-204ENST00000554258 HIRAP54198 1017 aaPredicted RBP22.85■■□□□ 1.25
NEK9-204ENST00000554258 C2orf69Q8N8R5 385 aa22.85■■□□□ 1.25
NEK9-204ENST00000554258 CSRNP1Q96S65 589 aa22.85■■□□□ 1.25
NEK9-204ENST00000554258 GBA2Q9HCG7 927 aaPredicted RBP22.85■■□□□ 1.25
NEK9-204ENST00000554258 CEP290O15078 2479 aa22.84■■□□□ 1.25
NEK9-204ENST00000554258 CXCL9Q07325 125 aa22.84■■□□□ 1.25
NEK9-204ENST00000554258 ZNF790Q6PG37 636 aa22.84■■□□□ 1.25
NEK9-204ENST00000554258 TRPM4Q8TD43 1214 aa22.84■■□□□ 1.25
NEK9-204ENST00000554258 BCL2L13Q9BXK5 485 aa22.84■■□□□ 1.25
NEK9-204ENST00000554258 IL13P35225 146 aa22.83■■□□□ 1.25
NEK9-204ENST00000554258 AOC3Q16853 763 aa22.83■■□□□ 1.25
NEK9-204ENST00000554258 DLK2Q6UY11 383 aa22.83■■□□□ 1.25
NEK9-204ENST00000554258 CDHR2Q9BYE9 1310 aa22.82■■□□□ 1.24
NEK9-204ENST00000554258 CRY2Q49AN0 593 aa22.82■■□□□ 1.24
NEK9-204ENST00000554258 FMNL2Q96PY5 1086 aa22.82■■□□□ 1.24
NEK9-204ENST00000554258 ZNRF3Q9ULT6 936 aa22.82■■□□□ 1.24
NEK9-204ENST00000554258 SLC10A3P09131 477 aa22.81■■□□□ 1.24
NEK9-204ENST00000554258 PIP4K2AP48426 406 aaPredicted RBP22.81■■□□□ 1.24
NEK9-204ENST00000554258 MTHFSDQ2M296 383 aaKnown RBP22.81■■□□□ 1.24
NEK9-204ENST00000554258 RPGRQ92834 1020 aaKnown RBP22.81■■□□□ 1.24
NEK9-204ENST00000554258 TCERG1O14776 1098 aaKnown RBP22.8■■□□□ 1.24
NEK9-204ENST00000554258 REM2Q8IYK8 340 aaPredicted RBP22.8■■□□□ 1.24
NEK9-204ENST00000554258 KIAA0100Q14667 2235 aaKnown RBP22.8■■□□□ 1.24
NEK9-204ENST00000554258 EIF4G2P78344 907 aaKnown RBP eCLIP22.79■■□□□ 1.24
NEK9-204ENST00000554258 TEFQ10587 303 aa22.79■■□□□ 1.24
NEK9-204ENST00000554258 FBXO46Q6PJ61 603 aaPredicted RBP22.79■■□□□ 1.24
NEK9-204ENST00000554258 ZNF296Q8WUU4 475 aaPredicted RBP22.79■■□□□ 1.24
NEK9-204ENST00000554258 SIPA1L3O60292 1781 aaPredicted RBP22.78■■□□□ 1.24
NEK9-204ENST00000554258 PPEF1O14829 653 aaPredicted RBP22.78■■□□□ 1.24
NEK9-204ENST00000554258 KRT26Q7Z3Y9 468 aa22.78■■□□□ 1.24
NEK9-204ENST00000554258 SLC51AQ86UW1 340 aa22.78■■□□□ 1.24
NEK9-204ENST00000554258 CNOT7Q9UIV1 285 aaKnown RBP22.78■■□□□ 1.24
NEK9-204ENST00000554258 CENPFP49454 3210 aa22.78■■□□□ 1.24
NEK9-204ENST00000554258 H7C1D1 291 aa22.77■■□□□ 1.24
NEK9-204ENST00000554258 HMOX1P09601 288 aa22.77■■□□□ 1.24
NEK9-204ENST00000554258 VPS33BQ9H267 617 aa22.77■■□□□ 1.24
NEK9-204ENST00000554258 ABCC12Q96J65 1359 aa22.76■■□□□ 1.23
NEK9-204ENST00000554258 HSPA5P11021 654 aaKnown RBP22.76■■□□□ 1.23
NEK9-204ENST00000554258 TNIP1Q15025 636 aa22.76■■□□□ 1.23
NEK9-204ENST00000554258 TMX4Q9H1E5 349 aaPredicted RBP22.76■■□□□ 1.23
NEK9-204ENST00000554258 HTTP42858 3142 aa22.75■■□□□ 1.23
NEK9-204ENST00000554258 SHTN1A0MZ66 631 aa22.75■■□□□ 1.23
NEK9-204ENST00000554258 RAD17O75943 681 aa22.75■■□□□ 1.23
NEK9-204ENST00000554258 HOXA10P31260 410 aaPredicted RBP22.75■■□□□ 1.23
NEK9-204ENST00000554258 RGL2O15211 777 aa22.74■■□□□ 1.23
NEK9-204ENST00000554258 NUTM1Q86Y26 1132 aa22.74■■□□□ 1.23
NEK9-204ENST00000554258 SLC17A8Q8NDX2 589 aa22.74■■□□□ 1.23
NEK9-204ENST00000554258 TBC1D8O95759 1140 aa22.73■■□□□ 1.23
NEK9-204ENST00000554258 MORC1Q86VD1 984 aa22.73■■□□□ 1.23
NEK9-204ENST00000554258 MICALL2Q8IY33 904 aa22.73■■□□□ 1.23
NEK9-204ENST00000554258 RBM17Q96I25 401 aaKnown RBP22.73■■□□□ 1.23
NEK9-204ENST00000554258 POLR3GLQ9BT43 218 aa22.73■■□□□ 1.23
NEK9-204ENST00000554258 NYXQ9GZU5 481 aa22.73■■□□□ 1.23
NEK9-204ENST00000554258 COLQQ9Y215 455 aaPredicted RBP22.73■■□□□ 1.23
NEK9-204ENST00000554258 USP16Q9Y5T5 823 aa22.73■■□□□ 1.23
NEK9-204ENST00000554258 KIF7Q2M1P5 1343 aa22.73■■□□□ 1.23
NEK9-204ENST00000554258 ADM5C9JUS6 153 aa22.72■■□□□ 1.23
NEK9-204ENST00000554258 SUPT20HQ8NEM7 779 aa22.72■■□□□ 1.23
NEK9-204ENST00000554258 CRAMP1Q96RY5 1269 aa22.72■■□□□ 1.23
NEK9-204ENST00000554258 RIC1Q4ADV7 1423 aa22.72■■□□□ 1.23
NEK9-204ENST00000554258 BRCA2P51587 3418 aa22.71■■□□□ 1.23
NEK9-204ENST00000554258 DCPSQ96C86 337 aaKnown RBP22.71■■□□□ 1.23
NEK9-204ENST00000554258 HLFQ16534 295 aa22.7■■□□□ 1.22
NEK9-204ENST00000554258 SAMD7Q7Z3H4 446 aa22.7■■□□□ 1.22
NEK9-204ENST00000554258 RASAL3Q86YV0 1011 aa22.7■■□□□ 1.22
NEK9-204ENST00000554258 PAPPA2Q9BXP8 1791 aa22.69■■□□□ 1.22
NEK9-204ENST00000554258 POTEFA5A3E0 1075 aa22.69■■□□□ 1.22
NEK9-204ENST00000554258 IL17REQ8NFR9 667 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms