RNA–Protein interactions for RNA: ENST00000554196.1

LINC00520-202, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-202ENST00000554196 KIF1BPQ96EK5 621 aa11.35□□□□□ -0.59
LINC00520-202ENST00000554196 GJD4Q96KN9 370 aaPredicted RBP11.35□□□□□ -0.59
LINC00520-202ENST00000554196 LOC102724428A0A0B4J2F2 783 aa11.34□□□□□ -0.59
LINC00520-202ENST00000554196 PIP4K2AP48426 406 aaPredicted RBP11.34□□□□□ -0.59
LINC00520-202ENST00000554196 SIK1P57059 783 aa11.34□□□□□ -0.59
LINC00520-202ENST00000554196 TRIM28Q13263 835 aaKnown RBP11.34□□□□□ -0.59
LINC00520-202ENST00000554196 TTC22Q5TAA0 569 aa11.34□□□□□ -0.59
LINC00520-202ENST00000554196 TTLL7Q6ZT98 887 aa11.34□□□□□ -0.59
LINC00520-202ENST00000554196 PLEKHM2Q8IWE5 1019 aa11.34□□□□□ -0.59
LINC00520-202ENST00000554196 SUCLG2Q96I99 432 aa11.34□□□□□ -0.59
LINC00520-202ENST00000554196 OSBPL3Q9H4L5 887 aa11.34□□□□□ -0.59
LINC00520-202ENST00000554196 EXOC6BQ9Y2D4 811 aa11.34□□□□□ -0.59
LINC00520-202ENST00000554196 SPEF2Q9C093 1822 aa11.34□□□□□ -0.59
LINC00520-202ENST00000554196 UBR3Q6ZT12 1888 aa11.34□□□□□ -0.59
LINC00520-202ENST00000554196 ARAP2Q8WZ64 1704 aa11.33□□□□□ -0.6
LINC00520-202ENST00000554196 ERVV-1B6SEH8 477 aa11.33□□□□□ -0.6
LINC00520-202ENST00000554196 RGL2O15211 777 aa11.33□□□□□ -0.6
LINC00520-202ENST00000554196 ONECUT3O60422 494 aaPredicted RBP11.33□□□□□ -0.6
LINC00520-202ENST00000554196 SURF6O75683 361 aaKnown RBP11.33□□□□□ -0.6
LINC00520-202ENST00000554196 RABL6Q3YEC7 729 aaPredicted RBP11.33□□□□□ -0.6
LINC00520-202ENST00000554196 DDRGK1Q96HY6 314 aa11.33□□□□□ -0.6
LINC00520-202ENST00000554196 ISCA1Q9BUE6 129 aa11.33□□□□□ -0.6
LINC00520-202ENST00000554196 CCDC87Q9NVE4 849 aa11.33□□□□□ -0.6
LINC00520-202ENST00000554196 LRP5O75197 1615 aa11.33□□□□□ -0.6
LINC00520-202ENST00000554196 MYH7P12883 1935 aa11.33□□□□□ -0.6
LINC00520-202ENST00000554196 SALL3Q9BXA9 1300 aa11.33□□□□□ -0.6
LINC00520-202ENST00000554196 CNTNAP4Q9C0A0 1308 aa11.33□□□□□ -0.6
LINC00520-202ENST00000554196 A0A1B0GUL6 1792 aa11.32□□□□□ -0.6
LINC00520-202ENST00000554196 A0A087WZG4 1122 aa11.32□□□□□ -0.6
LINC00520-202ENST00000554196 CDC45O75419 566 aa11.32□□□□□ -0.6
LINC00520-202ENST00000554196 OS9Q13438 667 aaPredicted RBP11.32□□□□□ -0.6
LINC00520-202ENST00000554196 TCIRG1Q13488 830 aa11.32□□□□□ -0.6
LINC00520-202ENST00000554196 GIGYF2Q6Y7W6 1299 aaKnown RBP11.32□□□□□ -0.6
LINC00520-202ENST00000554196 UBE3BQ7Z3V4 1068 aa11.32□□□□□ -0.6
LINC00520-202ENST00000554196 ACSBG1Q96GR2 724 aa11.32□□□□□ -0.6
LINC00520-202ENST00000554196 SLC4A9Q96Q91 983 aa11.32□□□□□ -0.6
LINC00520-202ENST00000554196 ZBTB3Q9H5J0 574 aa11.32□□□□□ -0.6
LINC00520-202ENST00000554196 BICC1Q9H694 974 aaKnown RBP11.32□□□□□ -0.6
LINC00520-202ENST00000554196 ZBTB1Q9Y2K1 713 aa11.32□□□□□ -0.6
LINC00520-202ENST00000554196 CDHR2Q9BYE9 1310 aa11.32□□□□□ -0.6
LINC00520-202ENST00000554196 H7C1W4 665 aa11.31□□□□□ -0.6
LINC00520-202ENST00000554196 MX1P20591 662 aa11.31□□□□□ -0.6
LINC00520-202ENST00000554196 ATP6V1AP38606 617 aa11.31□□□□□ -0.6
LINC00520-202ENST00000554196 CASP7P55210 303 aa11.31□□□□□ -0.6
LINC00520-202ENST00000554196 RHPN1Q8TCX5 695 aa11.31□□□□□ -0.6
LINC00520-202ENST00000554196 STAP2Q9UGK3 403 aa11.31□□□□□ -0.6
LINC00520-202ENST00000554196 ATP5J2-PTCD1G3V325 749 aa11.3□□□□□ -0.6
LINC00520-202ENST00000554196 PCCAP05165 728 aaPredicted RBP11.3□□□□□ -0.6
LINC00520-202ENST00000554196 HMGB2P26583 209 aaKnown RBP11.3□□□□□ -0.6
LINC00520-202ENST00000554196 CRKLP46109 303 aaKnown RBP11.3□□□□□ -0.6
LINC00520-202ENST00000554196 PDE1AP54750 535 aa11.3□□□□□ -0.6
LINC00520-202ENST00000554196 EIF5P55010 431 aaKnown RBP11.3□□□□□ -0.6
LINC00520-202ENST00000554196 CASC1Q6TDU7 716 aa11.3□□□□□ -0.6
LINC00520-202ENST00000554196 GPATCH3Q96I76 525 aa11.3□□□□□ -0.6
LINC00520-202ENST00000554196 KAZALD1Q96I82 304 aa11.3□□□□□ -0.6
LINC00520-202ENST00000554196 COPRSQ9NQ92 184 aa11.3□□□□□ -0.6
LINC00520-202ENST00000554196 ZNF330Q9Y3S2 320 aaPredicted RBP11.3□□□□□ -0.6
LINC00520-202ENST00000554196 TTC41PQ6P2S7 1318 aa11.3□□□□□ -0.6
LINC00520-202ENST00000554196 USP42Q9H9J4 1324 aaKnown RBP11.3□□□□□ -0.6
LINC00520-202ENST00000554196 APBB1O00213 710 aa11.29□□□□□ -0.6
LINC00520-202ENST00000554196 SMARCA5O60264 1052 aaPredicted RBP11.29□□□□□ -0.6
LINC00520-202ENST00000554196 G3BP1Q13283 466 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00520-202ENST00000554196 DZIP3Q86Y13 1208 aaKnown RBP11.29□□□□□ -0.6
LINC00520-202ENST00000554196 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
LINC00520-202ENST00000554196 CLASRPQ8N2M8 674 aaKnown RBP11.29□□□□□ -0.6
LINC00520-202ENST00000554196 PLA2G12BQ9BX93 195 aa11.29□□□□□ -0.6
LINC00520-202ENST00000554196 TNS1Q9HBL0 1735 aaKnown RBP11.29□□□□□ -0.6
LINC00520-202ENST00000554196 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
LINC00520-202ENST00000554196 GSPT1P15170 499 aaKnown RBP11.28□□□□□ -0.6
LINC00520-202ENST00000554196 PARP10Q53GL7 1025 aa11.28□□□□□ -0.6
LINC00520-202ENST00000554196 ZNF772Q68DY9 489 aaPredicted RBP11.28□□□□□ -0.6
LINC00520-202ENST00000554196 ZNF652Q9Y2D9 606 aa11.28□□□□□ -0.6
LINC00520-202ENST00000554196 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
LINC00520-202ENST00000554196 SPDYE4A6NLX3 237 aa11.27□□□□□ -0.61
LINC00520-202ENST00000554196 ERC2O15083 957 aa11.27□□□□□ -0.61
LINC00520-202ENST00000554196 ITPK1Q13572 414 aa11.27□□□□□ -0.61
LINC00520-202ENST00000554196 RC3H1Q5TC82 1133 aaKnown RBP11.27□□□□□ -0.61
LINC00520-202ENST00000554196 INTS5Q6P9B9 1019 aaKnown RBP11.27□□□□□ -0.61
LINC00520-202ENST00000554196 SEPT12Q8IYM1 358 aa11.27□□□□□ -0.61
LINC00520-202ENST00000554196 ZBTB38Q8NAP3 1195 aaPredicted RBP11.27□□□□□ -0.61
LINC00520-202ENST00000554196 AK7Q96M32 723 aa11.27□□□□□ -0.61
LINC00520-202ENST00000554196 TBC1D32Q96NH3 1257 aa11.27□□□□□ -0.61
LINC00520-202ENST00000554196 IPO9Q96P70 1041 aaKnown RBP11.27□□□□□ -0.61
LINC00520-202ENST00000554196 ATF5Q9Y2D1 282 aaPredicted RBP11.27□□□□□ -0.61
LINC00520-202ENST00000554196 KCNQ2O43526 872 aa11.26□□□□□ -0.61
LINC00520-202ENST00000554196 GLRX3O76003 335 aaKnown RBP11.26□□□□□ -0.61
LINC00520-202ENST00000554196 RFX5P48382 616 aaPredicted RBP11.26□□□□□ -0.61
LINC00520-202ENST00000554196 EPHA10Q5JZY3 1008 aa11.26□□□□□ -0.61
LINC00520-202ENST00000554196 TBC1D9Q6ZT07 1266 aa11.26□□□□□ -0.61
LINC00520-202ENST00000554196 NLRP10Q86W26 655 aa11.26□□□□□ -0.61
LINC00520-202ENST00000554196 C16orf71Q8IYS4 520 aaPredicted RBP11.26□□□□□ -0.61
LINC00520-202ENST00000554196 SPRYD3Q8NCJ5 442 aa11.26□□□□□ -0.61
LINC00520-202ENST00000554196 OTUD7AQ8TE49 926 aaPredicted RBP11.26□□□□□ -0.61
LINC00520-202ENST00000554196 MYH13Q9UKX3 1938 aa11.26□□□□□ -0.61
LINC00520-202ENST00000554196 IFIT2P09913 472 aaKnown RBP11.25□□□□□ -0.61
LINC00520-202ENST00000554196 FOXO4P98177 505 aa11.25□□□□□ -0.61
LINC00520-202ENST00000554196 LMBR1LQ6UX01 489 aa11.25□□□□□ -0.61
LINC00520-202ENST00000554196 CLEC4GQ6UXB4 293 aa11.25□□□□□ -0.61
LINC00520-202ENST00000554196 QTRT2Q9H974 415 aaKnown RBP11.25□□□□□ -0.61
LINC00520-202ENST00000554196 IL1RAPL2Q9NP60 686 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms